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Items: 1 to 50 of 83

1.

Biochemical characterization and low-resolution SAXS shape of a novel GH11 exo-1,4-β-xylanase identified in a microbial consortium.

Evangelista DE, de Oliveira Arnoldi Pellegrini V, Santo ME, McQueen-Mason S, Bruce NC, Polikarpov I.

Appl Microbiol Biotechnol. 2019 Aug 12. doi: 10.1007/s00253-019-10033-8. [Epub ahead of print]

PMID:
31407040
2.

Genomic analysis of a lignocellulose degrading strain from the underexplored genus Meridianimaribacter.

Lam MQ, Oates NC, Thevarajoo S, Tokiman L, Goh KM, McQueen-Mason SJ, Bruce NC, Chong CS.

Genomics. 2019 Jun 13. pii: S0888-7543(19)30122-3. doi: 10.1016/j.ygeno.2019.06.011. [Epub ahead of print]

PMID:
31201854
3.

Sudangrass, an alternative lignocellulosic feedstock for bioenergy in Argentina.

Acevedo A, Simister R, McQueen-Mason SJ, Gómez LD.

PLoS One. 2019 May 23;14(5):e0217435. doi: 10.1371/journal.pone.0217435. eCollection 2019.

4.

Designing xylan for improved sustainable biofuel production.

Oliveira DM, Mota TR, Salatta FV, Marchiosi R, Gomez LD, McQueen-Mason SJ, Ferrarese-Filho O, Dos Santos WD.

Plant Biotechnol J. 2019 May 11. doi: 10.1111/pbi.13150. [Epub ahead of print]

5.

Hemocyanin facilitates lignocellulose digestion by wood-boring marine crustaceans.

Besser K, Malyon GP, Eborall WS, Paro da Cunha G, Filgueiras JG, Dowle A, Cruz Garcia L, Page SJ, Dupree R, Kern M, Gomez LD, Li Y, Elias L, Sabbadin F, Mohamad SE, Pesante G, Steele-King C, Ribeiro de Azevedo E, Polikarpov I, Dupree P, Cragg SM, Bruce NC, McQueen-Mason SJ.

Nat Commun. 2018 Dec 3;9(1):5125. doi: 10.1038/s41467-018-07575-2.

6.

Biomass recalcitrance in barley, wheat and triticale straw: Correlation of biomass quality with classic agronomical traits.

Ostos Garrido FJ, Pistón F, Gómez LD, McQueen-Mason SJ.

PLoS One. 2018 Nov 7;13(11):e0205880. doi: 10.1371/journal.pone.0205880. eCollection 2018.

7.

Response of cell-wall composition and RNA-seq transcriptome to methyl-jasmonate in Brachypodium distachyon callus.

Hyde LS, Pellny TK, Freeman J, Michaelson LV, Simister R, McQueen-Mason SJ, Mitchell RAC.

Planta. 2018 Nov;248(5):1213-1229. doi: 10.1007/s00425-018-2968-9. Epub 2018 Aug 9.

8.

Optimization of biomass pretreatments using fractional factorial experimental design.

Rezende CA, Atta BW, Breitkreitz MC, Simister R, Gomez LD, McQueen-Mason SJ.

Biotechnol Biofuels. 2018 Jul 24;11:206. doi: 10.1186/s13068-018-1200-2. eCollection 2018.

9.

Defining functional diversity for lignocellulose degradation in a microbial community using multi-omics studies.

Alessi AM, Bird SM, Oates NC, Li Y, Dowle AA, Novotny EH, deAzevedo ER, Bennett JP, Polikarpov I, Young JPW, McQueen-Mason SJ, Bruce NC.

Biotechnol Biofuels. 2018 Jun 18;11:166. doi: 10.1186/s13068-018-1164-2. eCollection 2018.

10.

A glycosyl transferase family 43 protein involved in xylan biosynthesis is associated with straw digestibility in Brachypodium distachyon.

Whitehead C, Ostos Garrido FJ, Reymond M, Simister R, Distelfeld A, Atienza SG, Piston F, Gomez LD, McQueen-Mason SJ.

New Phytol. 2018 May;218(3):974-985. doi: 10.1111/nph.15089. Epub 2018 Mar 25.

11.

Uncovering the molecular mechanisms of lignocellulose digestion in shipworms.

Sabbadin F, Pesante G, Elias L, Besser K, Li Y, Steele-King C, Stark M, Rathbone DA, Dowle AA, Bates R, Shipway JR, Cragg SM, Bruce NC, McQueen-Mason SJ.

Biotechnol Biofuels. 2018 Mar 7;11:59. doi: 10.1186/s13068-018-1058-3. eCollection 2018.

12.

Bringing down the wall one brick at a time.

Gómez LD, McQueen-Mason SJ.

New Phytol. 2018 Apr;218(1):5-7. doi: 10.1111/nph.15052. No abstract available.

13.

An ancient family of lytic polysaccharide monooxygenases with roles in arthropod development and biomass digestion.

Sabbadin F, Hemsworth GR, Ciano L, Henrissat B, Dupree P, Tryfona T, Marques RDS, Sweeney ST, Besser K, Elias L, Pesante G, Li Y, Dowle AA, Bates R, Gomez LD, Simister R, Davies GJ, Walton PH, Bruce NC, McQueen-Mason SJ.

Nat Commun. 2018 Feb 22;9(1):756. doi: 10.1038/s41467-018-03142-x.

14.

An accurate description of Aspergillus niger organic acid batch fermentation through dynamic metabolic modelling.

Upton DJ, McQueen-Mason SJ, Wood AJ.

Biotechnol Biofuels. 2017 Nov 9;10:258. doi: 10.1186/s13068-017-0950-6. eCollection 2017.

15.

Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity.

Mello BL, Alessi AM, Riaño-Pachón DM, deAzevedo ER, Guimarães FEG, Espirito Santo MC, McQueen-Mason S, Bruce NC, Polikarpov I.

Biotechnol Biofuels. 2017 Nov 2;10:254. doi: 10.1186/s13068-017-0944-4. eCollection 2017.

16.

Evidence for Active Uptake and Deposition of Si-based Defenses in Tall Fescue.

McLarnon E, McQueen-Mason S, Lenk I, Hartley SE.

Front Plant Sci. 2017 Jul 18;8:1199. doi: 10.3389/fpls.2017.01199. eCollection 2017.

17.

Genetic complexity of miscanthus cell wall composition and biomass quality for biofuels.

van der Weijde T, Kamei CLA, Severing EI, Torres AF, Gomez LD, Dolstra O, Maliepaard CA, McQueen-Mason SJ, Visser RGF, Trindade LM.

BMC Genomics. 2017 May 25;18(1):406. doi: 10.1186/s12864-017-3802-7.

18.

Revealing the insoluble metasecretome of lignocellulose-degrading microbial communities.

Alessi AM, Bird SM, Bennett JP, Oates NC, Li Y, Dowle AA, Polikarpov I, Young JPW, McQueen-Mason SJ, Bruce NC.

Sci Rep. 2017 May 24;7(1):2356. doi: 10.1038/s41598-017-02506-5.

19.

Defining the functional traits that drive bacterial decomposer community productivity.

Evans R, Alessi AM, Bird S, McQueen-Mason SJ, Bruce NC, Brockhurst MA.

ISME J. 2017 Jul;11(7):1680-1687. doi: 10.1038/ismej.2017.22. Epub 2017 Mar 21.

20.

Nutrient availability shapes the microbial community structure in sugarcane bagasse compost-derived consortia.

Mello BL, Alessi AM, McQueen-Mason S, Bruce NC, Polikarpov I.

Sci Rep. 2016 Dec 12;6:38781. doi: 10.1038/srep38781.

21.

Mannitol biosynthesis in algae: more widespread and diverse than previously thought.

Tonon T, Li Y, McQueen-Mason S.

New Phytol. 2017 Mar;213(4):1573-1579. doi: 10.1111/nph.14358. Epub 2016 Nov 24. No abstract available.

22.

Linkage Mapping of Stem Saccharification Digestibility in Rice.

Liu B, Gómez LD, Hua C, Sun L, Ali I, Huang L, Yu C, Simister R, Steele-King C, Gan Y, McQueen-Mason SJ.

PLoS One. 2016 Jul 14;11(7):e0159117. doi: 10.1371/journal.pone.0159117. eCollection 2016.

23.

Exploring tomato Solanum pennellii introgression lines for residual biomass and enzymatic digestibility traits.

Caruso G, Gomez LD, Ferriello F, Andolfi A, Borgonuovo C, Evidente A, Simister R, McQueen-Mason SJ, Carputo D, Frusciante L, Ercolano MR.

BMC Genet. 2016 Apr 5;17:56. doi: 10.1186/s12863-016-0362-9.

24.

Characterization of the cellulolytic secretome of Trichoderma harzianum during growth on sugarcane bagasse and analysis of the activity boosting effects of swollenin.

A L Rocha V, N Maeda R, Pereira N Jr, F Kern M, Elias L, Simister R, Steele-King C, Gómez LD, McQueen-Mason SJ.

Biotechnol Prog. 2016 Mar;32(2):327-36. doi: 10.1002/btpr.2217. Epub 2016 Jan 12.

PMID:
26697775
25.

Lignocellulose degradation mechanisms across the Tree of Life.

Cragg SM, Beckham GT, Bruce NC, Bugg TD, Distel DL, Dupree P, Etxabe AG, Goodell BS, Jellison J, McGeehan JE, McQueen-Mason SJ, Schnorr K, Walton PH, Watts JE, Zimmer M.

Curr Opin Chem Biol. 2015 Dec;29:108-19. doi: 10.1016/j.cbpa.2015.10.018. Epub 2015 Nov 14. Review.

26.

Unlocking the potential of lignocellulosic biomass through plant science.

Marriott PE, Gómez LD, McQueen-Mason SJ.

New Phytol. 2016 Mar;209(4):1366-81. doi: 10.1111/nph.13684. Epub 2015 Oct 7. Review.

27.

Active fungal GH115 α-glucuronidase produced in Arabidopsis thaliana affects only the UX1-reactive glucuronate decorations on native glucuronoxylans.

Chong SL, Derba-Maceluch M, Koutaniemi S, Gómez LD, McQueen-Mason SJ, Tenkanen M, Mellerowicz EJ.

BMC Biotechnol. 2015 Jun 18;15:56. doi: 10.1186/s12896-015-0154-8.

28.

Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose.

Pawar PM, Derba-Maceluch M, Chong SL, Gómez LD, Miedes E, Banasiak A, Ratke C, Gaertner C, Mouille G, McQueen-Mason SJ, Molina A, Sellstedt A, Tenkanen M, Mellerowicz EJ.

Plant Biotechnol J. 2016 Jan;14(1):387-97. doi: 10.1111/pbi.12393. Epub 2015 May 11.

29.

Range of cell-wall alterations enhance saccharification in Brachypodium distachyon mutants.

Marriott PE, Sibout R, Lapierre C, Fangel JU, Willats WG, Hofte H, Gómez LD, McQueen-Mason SJ.

Proc Natl Acad Sci U S A. 2014 Oct 7;111(40):14601-6. doi: 10.1073/pnas.1414020111. Epub 2014 Sep 22.

30.

Evaluating the composition and processing potential of novel sources of Brazilian biomass for sustainable biorenewables production.

Lima MA, Gomez LD, Steele-King CG, Simister R, Bernardinelli OD, Carvalho MA, Rezende CA, Labate CA, Deazevedo ER, McQueen-Mason SJ, Polikarpov I.

Biotechnol Biofuels. 2014 Jan 18;7(1):10. doi: 10.1186/1754-6834-7-10.

31.

Identification of crop cultivars with consistently high lignocellulosic sugar release requires the use of appropriate statistical design and modelling.

Oakey H, Shafiei R, Comadran J, Uzrek N, Cullis B, Gomez LD, Whitehead C, McQueen-Mason SJ, Waugh R, Halpin C.

Biotechnol Biofuels. 2013 Dec 21;6(1):185. doi: 10.1186/1754-6834-6-185.

32.

Structural characterization of a unique marine animal family 7 cellobiohydrolase suggests a mechanism of cellulase salt tolerance.

Kern M, McGeehan JE, Streeter SD, Martin RN, Besser K, Elias L, Eborall W, Malyon GP, Payne CM, Himmel ME, Schnorr K, Beckham GT, Cragg SM, Bruce NC, McQueen-Mason SJ.

Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10189-94. doi: 10.1073/pnas.1301502110. Epub 2013 Jun 3.

33.

Effects of pretreatment on morphology, chemical composition and enzymatic digestibility of eucalyptus bark: a potentially valuable source of fermentable sugars for biofuel production - part 1.

Lima MA, Lavorente GB, da Silva HK, Bragatto J, Rezende CA, Bernardinelli OD, Deazevedo ER, Gomez LD, McQueen-Mason SJ, Labate CA, Polikarpov I.

Biotechnol Biofuels. 2013 May 9;6(1):75. doi: 10.1186/1754-6834-6-75.

34.

Latitudinal variation in ambient UV-B radiation is an important determinant of Lolium perenne forage production, quality, and digestibility.

Comont D, Winters A, Gomez LD, McQueen-Mason SJ, Gwynn-Jones D.

J Exp Bot. 2013 May;64(8):2193-204. doi: 10.1093/jxb/ert077. Epub 2013 Apr 11.

35.

Achieving sustainable biomaterials by maximising waste recovery.

Glew D, Stringer LC, McQueen-Mason S.

Waste Manag. 2013 Jun;33(6):1499-508. doi: 10.1016/j.wasman.2013.03.005. Epub 2013 Apr 3.

36.

Disrupting the cinnamyl alcohol dehydrogenase 1 gene (BdCAD1) leads to altered lignification and improved saccharification in Brachypodium distachyon.

Bouvier d'Yvoire M, Bouchabke-Coussa O, Voorend W, Antelme S, Cézard L, Legée F, Lebris P, Legay S, Whitehead C, McQueen-Mason SJ, Gomez LD, Jouanin L, Lapierre C, Sibout R.

Plant J. 2013 Feb;73(3):496-508. doi: 10.1111/tpj.12053. Epub 2012 Dec 10.

37.

Arabidopsis GT34 family contains five xyloglucan α-1,6-xylosyltransferases.

Vuttipongchaikij S, Brocklehurst D, Steele-King C, Ashford DA, Gomez LD, McQueen-Mason SJ.

New Phytol. 2012 Aug;195(3):585-95. doi: 10.1111/j.1469-8137.2012.04196.x. Epub 2012 Jun 6.

38.

The analysis of saccharification in biomass using an automated high-throughput method.

Whitehead C, Gomez LD, McQueen-Mason SJ.

Methods Enzymol. 2012;510:37-50. doi: 10.1016/B978-0-12-415931-0.00003-3.

PMID:
22608720
39.

High-throughput Saccharification assay for lignocellulosic materials.

Gomez LD, Whitehead C, Roberts P, McQueen-Mason SJ.

J Vis Exp. 2011 Jul 3;(53). pii: 3240. doi: 10.3791/3240.

40.

Identification of 'carbon hot-spots' and quantification of GHG intensities in the biodiesel supply chain using hybrid LCA and structural path analysis.

Acquaye AA, Wiedmann T, Feng K, Crawford RH, Barrett J, Kuylenstierna J, Duffy AP, Koh SC, McQueen-Mason S.

Environ Sci Technol. 2011 Mar 15;45(6):2471-8. doi: 10.1021/es103410q. Epub 2011 Feb 14.

PMID:
21319814
41.

Arabidopsis genes IRREGULAR XYLEM (IRX15) and IRX15L encode DUF579-containing proteins that are essential for normal xylan deposition in the secondary cell wall.

Brown D, Wightman R, Zhang Z, Gomez LD, Atanassov I, Bukowski JP, Tryfona T, McQueen-Mason SJ, Dupree P, Turner S.

Plant J. 2011 May;66(3):401-13. doi: 10.1111/j.1365-313X.2011.04501.x. Epub 2011 Feb 24.

42.

Automated saccharification assay for determination of digestibility in plant materials.

Gomez LD, Whitehead C, Barakate A, Halpin C, McQueen-Mason SJ.

Biotechnol Biofuels. 2010 Oct 27;3:23. doi: 10.1186/1754-6834-3-23.

43.

Molecular insight into lignocellulose digestion by a marine isopod in the absence of gut microbes.

King AJ, Cragg SM, Li Y, Dymond J, Guille MJ, Bowles DJ, Bruce NC, Graham IA, McQueen-Mason SJ.

Proc Natl Acad Sci U S A. 2010 Mar 23;107(12):5345-50. doi: 10.1073/pnas.0914228107. Epub 2010 Mar 8.

44.

Expansins expression is associated with grain size dynamics in wheat (Triticum aestivum L.).

Lizana XC, Riegel R, Gomez LD, Herrera J, Isla A, McQueen-Mason SJ, Calderini DF.

J Exp Bot. 2010 Feb;61(4):1147-57. doi: 10.1093/jxb/erp380. Epub 2010 Jan 15.

45.

Arabinan metabolism during seed development and germination in Arabidopsis.

Gomez LD, Steele-King CG, Jones L, Foster JM, Vuttipongchaikij S, McQueen-Mason SJ.

Mol Plant. 2009 Sep;2(5):966-76. doi: 10.1093/mp/ssp050. Epub 2009 Jul 17.

46.

Phased control of expansin activity during leaf development identifies a sensitivity window for expansin-mediated induction of leaf growth.

Sloan J, Backhaus A, Malinowski R, McQueen-Mason S, Fleming AJ.

Plant Physiol. 2009 Dec;151(4):1844-54. doi: 10.1104/pp.109.144683. Epub 2009 Sep 29.

47.

Analysis of saccharification in Brachypodium distachyon stems under mild conditions of hydrolysis.

Gomez LD, Bristow JK, Statham ER, McQueen-Mason SJ.

Biotechnol Biofuels. 2008 Oct 22;1(1):15. doi: 10.1186/1754-6834-1-15.

48.

pH and expansin action on single suspension-cultured tomato (Lycopersicon esculentum) cells.

Wang CX, Wang L, McQueen-Mason SJ, Pritchard J, Thomas CR.

J Plant Res. 2008 Sep;121(5):527-34. doi: 10.1007/s10265-008-0176-6. Epub 2008 Jul 10.

PMID:
18615263
49.

Engineering a catabolic pathway in plants for the degradation of 1,2-dichloroethane.

Mena-Benitez GL, Gandia-Herrero F, Graham S, Larson TR, McQueen-Mason SJ, French CE, Rylott EL, Bruce NC.

Plant Physiol. 2008 Jul;147(3):1192-8. doi: 10.1104/pp.108.119008. Epub 2008 May 8.

50.

Sustainable liquid biofuels from biomass: the writing's on the walls.

Gomez LD, Steele-King CG, McQueen-Mason SJ.

New Phytol. 2008;178(3):473-85. doi: 10.1111/j.1469-8137.2008.02422.x. Epub 2008 Mar 27. Review.

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