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Skin lightening practices, beliefs, and self-reported adverse effects among female health science students in Borama, Somaliland: A cross-sectional survey.

Yusuf MA, Mahmoud ND, Rirash FR, Stoff BK, Liu Y, McMichael JR.

Int J Womens Dermatol. 2019 Aug 23;5(5):349-355. doi: 10.1016/j.ijwd.2019.08.006. eCollection 2019 Dec.


pVACtools: a computational toolkit to identify and visualize cancer neoantigens.

Hundal J, Kiwala S, McMichael J, Miller CA, Xia H, Wollam AT, Liu CJ, Zhao S, Feng YY, Graubert AP, Wollam AZ, Neichin J, Neveau M, Walker J, Gillanders WE, Mardis ER, Griffith OL, Griffith M.

Cancer Immunol Res. 2020 Jan 6. pii: canimm.0401.2019. doi: 10.1158/2326-6066.CIR-19-0401. [Epub ahead of print]


Standard operating procedure for curation and clinical interpretation of variants in cancer.

Danos AM, Krysiak K, Barnell EK, Coffman AC, McMichael JF, Kiwala S, Spies NC, Sheta LM, Pema SP, Kujan L, Clark KA, Wollam AZ, Rao S, Ritter DI, Sonkin D, Raca G, Lin WH, Grisdale CJ, Kim RH, Wagner AH, Madhavan S, Griffith M, Griffith OL.

Genome Med. 2019 Nov 29;11(1):76. doi: 10.1186/s13073-019-0687-x.


Development of an Automated Algorithm to Generate Guideline-based Recommendations for Follow-up Colonoscopy.

Karwa A, Patell R, Parthasarathy G, Lopez R, McMichael J, Burke CA.

Clin Gastroenterol Hepatol. 2019 Oct 14. pii: S1542-3565(19)31112-7. doi: 10.1016/j.cgh.2019.10.013. [Epub ahead of print]


Cutaneous myiasis in an elderly woman in Somaliland.

Yusuf MA, Pritt BS, McMichael JR.

Int J Womens Dermatol. 2019 Apr 13;5(3):187-189. doi: 10.1016/j.ijwd.2019.04.022. eCollection 2019 Jul.


Regulated Phosphosignaling Associated with Breast Cancer Subtypes and Druggability.

Huang KL, Wu Y, Primeau T, Wang YT, Gao Y, McMichael JF, Scott AD, Cao S, Wendl MC, Johnson KJ, Ruggles K, Held J, Payne SH, Davies S, Dar A, Kinsinger CR, Mesri M, Rodriguez H, Ellis MJ, Townsend RR, Chen F, Fenyö D, Li S, Liu T, Carr SA, Ding L.

Mol Cell Proteomics. 2019 Aug;18(8):1630-1650. doi: 10.1074/mcp.RA118.001243. Epub 2019 Jun 13.


Association of Adenoma and Proximal Sessile Serrated Polyp Detection Rates With Endoscopist Characteristics.

Sarvepalli S, Garber A, Rothberg MB, Mankaney G, McMichael J, Morris-Stiff G, Vargo JJ, Rizk MK, Burke CA.

JAMA Surg. 2019 Jul 1;154(7):627-635. doi: 10.1001/jamasurg.2019.0564. Erratum in: JAMA Surg. 2019 May 22;:.


Modifiable Factors Associated with Quality of Bowel Preparation Among Hospitalized Patients Undergoing Colonoscopy.

Garber A, Sarvepalli S, Burke CA, Bhatt A, Ibrahim M, McMichael J, Morris-Stiff G, Rizk MK, Vargo JJ, Rothberg MB.

J Hosp Med. 2019 May;14(5):278-283. doi: 10.12788/jhm.3173.


Patient-Initiated Colonoscopy Scheduling Effectively Increases Colorectal Cancer Screening Adherence.

Mankaney G, Rizk M, Sarvepalli S, Bongorno J, Garber A, Lopez R, McMichael J, Burke CA.

Dig Dis Sci. 2019 Sep;64(9):2497-2504. doi: 10.1007/s10620-019-05584-9. Epub 2019 Mar 15.


Common bile duct dilation after bariatric surgery.

Mehta N, Strong AT, Stevens T, El-Hayek K, Nelson A, Owoyele A, Eltelbany A, Chahal P, Rizk M, Burke CA, McMichael J, Lopez R, Veniero J, Vargo J, Kroh M, Bhatt A.

Surg Endosc. 2019 Aug;33(8):2531-2538. doi: 10.1007/s00464-018-6546-9. Epub 2018 Oct 23.


Adapting crowdsourced clinical cancer curation in CIViC to the ClinGen minimum variant level data community-driven standards.

Danos AM, Ritter DI, Wagner AH, Krysiak K, Sonkin D, Micheel C, McCoy M, Rao S, Raca G, Boca SM, Roy A, Barnell EK, McMichael JF, Kiwala S, Coffman AC, Kujan L, Kulkarni S, Griffith M, Madhavan S, Griffith OL; Clinical Genome Resource Somatic Working Group and Clinical Interpretation of Variants in Cancer team members.

Hum Mutat. 2018 Nov;39(11):1721-1732. doi: 10.1002/humu.23651.


Store-and-forward teledermatology service for primary care providers in Afghanistan.

Ismail A, Stoff BK, McMichael JR.

Int J Dermatol. 2018 Nov;57(11):e145-e147. doi: 10.1111/ijd.14165. Epub 2018 Aug 2. No abstract available.


Integrative omics analyses broaden treatment targets in human cancer.

Sengupta S, Sun SQ, Huang KL, Oh C, Bailey MH, Varghese R, Wyczalkowski MA, Ning J, Tripathi P, McMichael JF, Johnson KJ, Kandoth C, Welch J, Ma C, Wendl MC, Payne SH, Fenyö D, Townsend RR, Dipersio JF, Chen F, Ding L.

Genome Med. 2018 Jul 27;10(1):60. doi: 10.1186/s13073-018-0564-z.


Transcriptional Changes in Cancer Cells Induced by Exposure to a Healing Method.

Beseme S, Bengston W, Radin D, Turner M, McMichael J.

Dose Response. 2018 Jul 11;16(3):1559325818782843. doi: 10.1177/1559325818782843. eCollection 2018 Jul-Sep.


Utility of international store-and-forward teledermatopathology among a cohort of mostly female patients at a tertiary referral center in Afghanistan.

Ismail A, McMichael JR, Stoff BK.

Int J Womens Dermatol. 2017 Nov 22;4(2):83-86. doi: 10.1016/j.ijwd.2017.10.011. eCollection 2018 Jun.


Teledermatology and teledermatopathology as educational tools for international dermatology: a virtual grand rounds pilot curriculum.

Yeung H, Sargen MR, Luk KM, Berry EG, Gurnee EA, Heuring E, McMichael J, Chen SC, Stoff BK.

Int J Dermatol. 2018 Nov;57(11):1358-1362. doi: 10.1111/ijd.14014. Epub 2018 Apr 24.


Impact of hypoglycaemia on neurodevelopmental outcomes in hypoxic ischaemic encephalopathy: a retrospective cohort study.

Tan JKG, Minutillo C, McMichael J, Rao S.

BMJ Paediatr Open. 2017 Sep 18;1(1):e000175. doi: 10.1136/bmjpo-2017-000175. eCollection 2017.


Pathogenic Germline Variants in 10,389 Adult Cancers.

Huang KL, Mashl RJ, Wu Y, Ritter DI, Wang J, Oh C, Paczkowska M, Reynolds S, Wyczalkowski MA, Oak N, Scott AD, Krassowski M, Cherniack AD, Houlahan KE, Jayasinghe R, Wang LB, Zhou DC, Liu D, Cao S, Kim YW, Koire A, McMichael JF, Hucthagowder V, Kim TB, Hahn A, Wang C, McLellan MD, Al-Mulla F, Johnson KJ; Cancer Genome Atlas Research Network, Lichtarge O, Boutros PC, Raphael B, Lazar AJ, Zhang W, Wendl MC, Govindan R, Jain S, Wheeler D, Kulkarni S, Dipersio JF, Reimand J, Meric-Bernstam F, Chen K, Shmulevich I, Plon SE, Chen F, Ding L.

Cell. 2018 Apr 5;173(2):355-370.e14. doi: 10.1016/j.cell.2018.03.039.


Interested in global health? Here is where to start: a checklist for United States dermatology residents.

McMichael J, Norton SA, Stoff BK.

Int J Dermatol. 2018 Mar;57(3):e23-e26. doi: 10.1111/ijd.13891. Epub 2018 Jan 10. No abstract available.


Surma eye cosmetic in Afghanistan: a potential source of lead toxicity in children.

McMichael JR, Stoff BK.

Eur J Pediatr. 2018 Feb;177(2):265-268. doi: 10.1007/s00431-017-3056-z. Epub 2017 Dec 9.


An intensive modular dermatology curriculum for family medicine residents in a resource-limited setting.

McMichael JR, Thompson KB, Kent SC, Stoff BK.

Int J Dermatol. 2018 Jan;57(1):119-120. doi: 10.1111/ijd.13757. Epub 2017 Sep 27. No abstract available.


Survival and neurodevelopmental outcomes in extremely preterm infants 22-24 weeks of gestation born in Western Australia.

Sharp M, French N, McMichael J, Campbell C.

J Paediatr Child Health. 2018 Feb;54(2):188-193. doi: 10.1111/jpc.13678. Epub 2017 Aug 24.


Servo controlled versus manual cooling methods in neonates with hypoxic ischemic encephalopathy.

Buchiboyina A, Ma E, Yip A, Wagh D, Tan J, McMichael J, Bulsara M, Rao S.

Early Hum Dev. 2017 Sep;112:35-41. doi: 10.1016/j.earlhumdev.2017.06.011. Epub 2017 Jul 4.


Neurodevelopmental outcomes of neonates undergoing surgery under general anesthesia for malrotation of intestines.

Birajdar S, Rao S, McMichael J.

Early Hum Dev. 2017 Jun;109:32-36. doi: 10.1016/j.earlhumdev.2017.04.003. Epub 2017 Apr 18.


Cancer Immunogenomics: Computational Neoantigen Identification and Vaccine Design.

Hundal J, Miller CA, Griffith M, Griffith OL, Walker J, Kiwala S, Graubert A, McMichael J, Coffman A, Mardis ER.

Cold Spring Harb Symp Quant Biol. 2016;81:105-111. doi: 10.1101/sqb.2016.81.030726. Epub 2017 Apr 7. Review.


Propranolol for infantile hemangiomas in developing countries.

McMichael J, Lawley LP.

Dermatol Online J. 2017 Mar 15;23(3). pii: 13030/qt5hs9c24f.


Comment on: "I didn't sign on to die": The dermatologist's ethical obligations during a deadly epidemic.

McMichael J, Stoff BK.

J Am Acad Dermatol. 2017 Apr;76(4):e139. doi: 10.1016/j.jaad.2016.10.050. No abstract available.


CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer.

Griffith M, Spies NC, Krysiak K, McMichael JF, Coffman AC, Danos AM, Ainscough BJ, Ramirez CA, Rieke DT, Kujan L, Barnell EK, Wagner AH, Skidmore ZL, Wollam A, Liu CJ, Jones MR, Bilski RL, Lesurf R, Feng YY, Shah NM, Bonakdar M, Trani L, Matlock M, Ramu A, Campbell KM, Spies GC, Graubert AP, Gangavarapu K, Eldred JM, Larson DE, Walker JR, Good BM, Wu C, Su AI, Dienstmann R, Margolin AA, Tamborero D, Lopez-Bigas N, Jones SJ, Bose R, Spencer DH, Wartman LD, Wilson RK, Mardis ER, Griffith OL.

Nat Genet. 2017 Jan 31;49(2):170-174. doi: 10.1038/ng.3774. No abstract available.


Visualizing tumor evolution with the fishplot package for R.

Miller CA, McMichael J, Dang HX, Maher CA, Ding L, Ley TJ, Mardis ER, Wilson RK.

BMC Genomics. 2016 Nov 7;17(1):880.


The relationship between sleep problems and working memory in children born very preterm.

McCann M, Bayliss DM, Anderson M, Campbell C, French N, McMichael J, Reid C, Bucks RS.

Child Neuropsychol. 2018 Jan;24(1):124-144. doi: 10.1080/09297049.2016.1235144. Epub 2016 Oct 19.


DoCM: a database of curated mutations in cancer.

Ainscough BJ, Griffith M, Coffman AC, Wagner AH, Kunisaki J, Choudhary MN, McMichael JF, Fulton RS, Wilson RK, Griffith OL, Mardis ER.

Nat Methods. 2016 Sep 29;13(10):806-7. doi: 10.1038/nmeth.4000. No abstract available.


Developmental outcomes in cerebrospinal fluid proven enteroviral meningitis in neonates > 32 weeks of gestation.

Balasubramanian H, Wagh D, Rao S, Keil AD, McMichael J.

J Paediatr Child Health. 2016 Mar;52(3):327-32. doi: 10.1111/jpc.13083.


Serotonin and Histamine Therapy Increases Tetanic Forces of Myoblasts, Reduces Muscle Injury, and Improves Grip Strength Performance of Dmd(mdx) Mice.

Gurel V, Lins J, Lambert K, Lazauski J, Spaulding J, McMichael J.

Dose Response. 2015 Nov 11;13(4):1559325815616351. doi: 10.1177/1559325815616351. eCollection 2015 Oct-Dec.


Patterns and functional implications of rare germline variants across 12 cancer types.

Lu C, Xie M, Wendl MC, Wang J, McLellan MD, Leiserson MD, Huang KL, Wyczalkowski MA, Jayasinghe R, Banerjee T, Ning J, Tripathi P, Zhang Q, Niu B, Ye K, Schmidt HK, Fulton RS, McMichael JF, Batra P, Kandoth C, Bharadwaj M, Koboldt DC, Miller CA, Kanchi KL, Eldred JM, Larson DE, Welch JS, You M, Ozenberger BA, Govindan R, Walter MJ, Ellis MJ, Mardis ER, Graubert TA, Dipersio JF, Ley TJ, Wilson RK, Goodfellow PJ, Raphael BJ, Chen F, Johnson KJ, Parvin JD, Ding L.

Nat Commun. 2015 Dec 22;6:10086. doi: 10.1038/ncomms10086.


Systematic discovery of complex insertions and deletions in human cancers.

Ye K, Wang J, Jayasinghe R, Lameijer EW, McMichael JF, Ning J, McLellan MD, Xie M, Cao S, Yellapantula V, Huang KL, Scott A, Foltz S, Niu B, Johnson KJ, Moed M, Slagboom PE, Chen F, Wendl MC, Ding L.

Nat Med. 2016 Jan;22(1):97-104. doi: 10.1038/nm.4002. Epub 2015 Dec 14.


Optimizing cancer genome sequencing and analysis.

Griffith M, Miller CA, Griffith OL, Krysiak K, Skidmore ZL, Ramu A, Walker JR, Dang HX, Trani L, Larson DE, Demeter RT, Wendl MC, McMichael JF, Austin RE, Magrini V, McGrath SD, Ly A, Kulkarni S, Cordes MG, Fronick CC, Fulton RS, Maher CA, Ding L, Klco JM, Mardis ER, Ley TJ, Wilson RK.

Cell Syst. 2015 Sep 23;1(3):210-223.


DGIdb 2.0: mining clinically relevant drug-gene interactions.

Wagner AH, Coffman AC, Ainscough BJ, Spies NC, Skidmore ZL, Campbell KM, Krysiak K, Pan D, McMichael JF, Eldred JM, Walker JR, Wilson RK, Mardis ER, Griffith M, Griffith OL.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1036-44. doi: 10.1093/nar/gkv1165. Epub 2015 Nov 3.


Percutaneous Endoscopic Gastrostomy for Decompression of Nonmalignant Gastrointestinal Disease.

Daigle CR, Boules M, Corcelles R, McMichael J, Kroh M, El-Hayek K, Brethauer SA.

J Laparoendosc Adv Surg Tech A. 2015 Oct;25(10):804-7. doi: 10.1089/lap.2014.0619. Epub 2015 Sep 22.


Genome Modeling System: A Knowledge Management Platform for Genomics.

Griffith M, Griffith OL, Smith SM, Ramu A, Callaway MB, Brummett AM, Kiwala MJ, Coffman AC, Regier AA, Oberkfell BJ, Sanderson GE, Mooney TP, Nutter NG, Belter EA, Du F, Long RL, Abbott TE, Ferguson IT, Morton DL, Burnett MM, Weible JV, Peck JB, Dukes A, McMichael JF, Lolofie JT, Derickson BR, Hundal J, Skidmore ZL, Ainscough BJ, Dees ND, Schierding WS, Kandoth C, Kim KH, Lu C, Harris CC, Maher N, Maher CA, Magrini VJ, Abbott BS, Chen K, Clark E, Das I, Fan X, Hawkins AE, Hepler TG, Wylie TN, Leonard SM, Schroeder WE, Shi X, Carmichael LK, Weil MR, Wohlstadter RW, Stiehr G, McLellan MD, Pohl CS, Miller CA, Koboldt DC, Walker JR, Eldred JM, Larson DE, Dooling DJ, Ding L, Mardis ER, Wilson RK.

PLoS Comput Biol. 2015 Jul 9;11(7):e1004274. doi: 10.1371/journal.pcbi.1004274. eCollection 2015 Jul.


Combination histamine and serotonin treatment after simulated childbirth injury improves stress urinary incontinence.

Song QX, Balog BM, Lin DL, Jiang HH, Gurel V, Spaulding J, Tobacyk J, McMichael J, Damaser MS.

Neurourol Urodyn. 2016 Aug;35(6):703-10. doi: 10.1002/nau.22793. Epub 2015 Jun 17.


Antibodies to Pseudogymnoascus destructans are not sufficient for protection against white-nose syndrome.

Johnson JS, Reeder DM, Lilley TM, Czirják GÁ, Voigt CC, McMichael JW, Meierhofer MB, Seery CW, Lumadue SS, Altmann AJ, Toro MO, Field KA.

Ecol Evol. 2015 Jun;5(11):2203-14. doi: 10.1002/ece3.1502. Epub 2015 May 11.


How do you think she feels? Vulnerability in empathy and the role of attention in school-aged children born extremely preterm.

Campbell C, Horlin C, Reid C, McMichael J, Forrest L, Brydges C, French N, Anderson M.

Br J Dev Psychol. 2015 Sep;33(3):312-23. doi: 10.1111/bjdp.12091. Epub 2015 Jun 9.


Outcomes of infants with Apgar score of zero at 10 min: the West Australian experience.

Shah P, Anvekar A, McMichael J, Rao S.

Arch Dis Child Fetal Neonatal Ed. 2015 Nov;100(6):F492-4. doi: 10.1136/archdischild-2014-307825. Epub 2015 Apr 15.


Neurodevelopmental outcomes at 7 years' corrected age in preterm infants who were fed high-dose docosahexaenoic acid to term equivalent: a follow-up of a randomised controlled trial.

Collins CT, Gibson RA, Anderson PJ, McPhee AJ, Sullivan TR, Gould JF, Ryan P, Doyle LW, Davis PG, McMichael JE, French NP, Colditz PB, Simmer K, Morris SA, Makrides M.

BMJ Open. 2015 Mar 18;5(3):e007314. doi: 10.1136/bmjopen-2014-007314.


Minimally invasive duodenojejunostomy for superior mesenteric artery syndrome: a case series and review of the literature.

Sun Z, Rodriguez J, McMichael J, Walsh RM, Chalikonda S, Rosenthal RJ, Kroh MD, El-Hayek K.

Surg Endosc. 2015 May;29(5):1137-44. doi: 10.1007/s00464-014-3775-4. Epub 2015 Feb 21. Review.


Surgical treatment of medically refractory gastroparesis in the morbidly obese.

Sun Z, Rodriguez J, McMichael J, Chand B, Nash D, Brethauer S, Schauer P, El-Hayek K, Kroh M.

Surg Endosc. 2015 Sep;29(9):2683-9. doi: 10.1007/s00464-014-3990-z. Epub 2015 Jan 17.


Expanding the reality of short-term international volunteerism in dermatology.

Stoff BK, McMichael JR.

J Am Acad Dermatol. 2015 Feb;72(2):369-70. doi: 10.1016/j.jaad.2014.10.040. No abstract available.


Host, pathogen, and environmental characteristics predict white-nose syndrome mortality in captive little brown myotis (Myotis lucifugus).

Johnson JS, Reeder DM, McMichael JW 3rd, Meierhofer MB, Stern DW, Lumadue SS, Sigler LE, Winters HD, Vodzak ME, Kurta A, Kath JA, Field KA.

PLoS One. 2014 Nov 19;9(11):e112502. doi: 10.1371/journal.pone.0112502. eCollection 2014.


Clonal architectures and driver mutations in metastatic melanomas.

Ding L, Kim M, Kanchi KL, Dees ND, Lu C, Griffith M, Fenstermacher D, Sung H, Miller CA, Goetz B, Wendl MC, Griffith O, Cornelius LA, Linette GP, McMichael JF, Sondak VK, Fields RC, Ley TJ, Mulé JJ, Wilson RK, Weber JS.

PLoS One. 2014 Nov 13;9(11):e111153. doi: 10.1371/journal.pone.0111153. eCollection 2014.


Age-related mutations associated with clonal hematopoietic expansion and malignancies.

Xie M, Lu C, Wang J, McLellan MD, Johnson KJ, Wendl MC, McMichael JF, Schmidt HK, Yellapantula V, Miller CA, Ozenberger BA, Welch JS, Link DC, Walter MJ, Mardis ER, Dipersio JF, Chen F, Wilson RK, Ley TJ, Ding L.

Nat Med. 2014 Dec;20(12):1472-8. doi: 10.1038/nm.3733. Epub 2014 Oct 19.

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