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Persistent HIV-infected cells in cerebrospinal fluid are associated with poorer neurocognitive performance.

Spudich S, Robertson KR, Bosch RJ, Gandhi RT, Cyktor JC, Mar H, Macatangay BJ, Lalama CM, Rinaldo C, Collier AC, Godfrey C, Eron JJ, McMahon D, Jacobs JL, Koontz D, Hogg E, Vecchio A, Mellors JW.

J Clin Invest. 2019 Jul 15;130. pii: 127413. doi: 10.1172/JCI127413. eCollection 2019 Jul 15.


Allogeneic hematopoietic cell transplant for HIV patients with hematologic malignancies: the BMT CTN-0903/AMC-080 trial.

Ambinder RF, Wu J, Logan B, Durand CM, Shields R, Popat UR, Little RF, McMahon DK, Cyktor J, Mellors JW, Ayala E, Kaplan LD, Noy A, Jones RJ, Howard A, Forman SJ, Porter D, Arce-Lara C, Shaughnessy P, Sproat L, Hashmi SK, Mendizabal AM, Horowitz MM, Navarro WH, Alvarnas JC.

Biol Blood Marrow Transplant. 2019 Jul 4. pii: S1083-8791(19)30417-3. doi: 10.1016/j.bbmt.2019.06.033. [Epub ahead of print]


Progressive ultrastructural changes in the casein matrix during the ripening of inadequately acidified feta cheese.

Vollmer AH, Youssef NN, Powell JA, McMahon DJ.

J Dairy Sci. 2019 Jul 3. pii: S0022-0302(19)30571-5. doi: 10.3168/jds.2019-16395. [Epub ahead of print]


Sequential Photoperiodic Programing of Serotonin Neurons, Signaling and Behaviors During Prenatal and Postnatal Development.

Siemann JK, Green NH, Reddy N, McMahon DG.

Front Neurosci. 2019 May 8;13:459. doi: 10.3389/fnins.2019.00459. eCollection 2019.


Commentary: Evaluating the Landscape of Clinical Research in Neurosurgery.

Quinn TJ, McMahon D.

Neurosurgery. 2019 May 23. pii: nyz155. doi: 10.1093/neuros/nyz155. [Epub ahead of print] No abstract available.


Brief Report: HIV Antibodies Decline During Antiretroviral Therapy but Remain Correlated With HIV DNA and HIV-Specific T-Cell Responses.

Keating SM, Jones RB, Lalama CM, Bosch RJ, McMahon D, Hampton D, Cyktor J, Eron JJ, Mellors JW, Busch MP, Gandhi RT; ACTG 5321 Team.

J Acquir Immune Defic Syndr. 2019 Aug 15;81(5):594-599. doi: 10.1097/QAI.0000000000002080.


Pregnane X receptor activation potentiates ritonavir hepatotoxicity.

Shehu AI, Lu J, Wang P, Zhu J, Wang Y, Yang D, McMahon D, Xie W, Gonzalez FJ, Ma X.

J Clin Invest. 2019 Apr 30;130:2898-2903. doi: 10.1172/JCI128274.


HIV infection is an independent risk factor for decreased 6-minute walk test distance.

Robertson TE, Nouraie M, Qin S, Crothers KA, Kessinger CJ, McMahon D, Chandra D, Kingsley LA, Greenblatt RM, Huang L, Fitzpatrick ME, Morris A.

PLoS One. 2019 Apr 24;14(4):e0212975. doi: 10.1371/journal.pone.0212975. eCollection 2019.


Response surface methodology modeling of protein concentration, coagulum cut size, and set temperature on curd moisture loss kinetics during curd stirring.

Panthi RR, Kelly AL, McMahon DJ, Dai X, Vollmer AH, Sheehan JJ.

J Dairy Sci. 2019 Jun;102(6):4989-5004. doi: 10.3168/jds.2018-15051. Epub 2019 Mar 28.


Management intensification maintains wood production over multiple harvests in tropical Eucalyptus plantations.

McMahon DE, Jackson RB.

Ecol Appl. 2019 Jun;29(4):e01879. doi: 10.1002/eap.1879. Epub 2019 Apr 10.


Naïve CD4+ T Cells Harbor a Large Inducible Reservoir of Latent, Replication-Competent HIV-1.

Zerbato JM, McMahon DK, Sobolewski MD, Mellors JW, Sluis-Cremer N.

Clin Infect Dis. 2019 Feb 7. doi: 10.1093/cid/ciz108. [Epub ahead of print]


Relationships between chronotype, social jetlag, sleep, obesity and blood pressure in healthy young adults.

McMahon DM, Burch JB, Youngstedt SD, Wirth MD, Hardin JW, Hurley TG, Blair SN, Hand GA, Shook RP, Drenowatz C, Burgess S, Hebert JR.

Chronobiol Int. 2019 Apr;36(4):493-509. doi: 10.1080/07420528.2018.1563094. Epub 2019 Jan 21.


Evaluating the safety profile of focused ultrasound and microbubble-mediated treatments to increase blood-brain barrier permeability.

McMahon D, Poon C, Hynynen K.

Expert Opin Drug Deliv. 2019 Feb;16(2):129-142. doi: 10.1080/17425247.2019.1567490. Epub 2019 Jan 29. Review.


Diet-related inflammation and risk of prostate cancer in the California Men's Health Study.

McMahon DM, Burch JB, Hébert JR, Hardin JW, Zhang J, Wirth MD, Youngstedt SD, Shivappa N, Jacobsen SJ, Caan B, Van Den Eeden SK.

Ann Epidemiol. 2019 Jan;29:30-38. doi: 10.1016/j.annepidem.2018.10.008. Epub 2018 Nov 2.


Influence of protein concentration and coagulation temperature on rennet-induced gelation characteristics and curd microstructure.

Panthi RR, Kelly AL, Sheehan JJ, Bulbul K, Vollmer AH, McMahon DJ.

J Dairy Sci. 2019 Jan;102(1):177-189. doi: 10.3168/jds.2018-15039. Epub 2018 Nov 15.


Administration of teriparatide for four years cyclically compared to two years daily in treatment Naïve and alendronate treated women.

Cosman F, Nieves JW, Roimisher C, Neubort S, McMahon DJ, Dempster DW, Lindsay R.

Bone. 2019 Mar;120:246-253. doi: 10.1016/j.bone.2018.10.020. Epub 2018 Oct 21.


Long-term follow-up of gonadal dysfunction in morbidly obese adolescent boys after bariatric surgery.

Chin VL, Willliams KM, Donnelley T, Censani M, Conroy R, Lerner S, Oberfield SE, McMahon DJ, Zitsman J, Fennoy I.

J Pediatr Endocrinol Metab. 2018 Nov 27;31(11):1191-1197. doi: 10.1515/jpem-2018-0261.


CYP1A1 and 1B1-mediated metabolic pathways of dolutegravir, an HIV integrase inhibitor.

Zhu J, Wang P, Li F, Lu J, Shehu AI, Xie W, McMahon D, Ma X.

Biochem Pharmacol. 2018 Dec;158:174-184. doi: 10.1016/j.bcp.2018.10.012. Epub 2018 Oct 17.


Tropheryma whipplei colonization in HIV-infected individuals is not associated with lung function or inflammation.

Qin S, Clausen E, Nouraie SM, Kingsley L, McMahon D, Kleerup E, Huang L, Ghedin E, Greenblatt RM, Morris A.

PLoS One. 2018 Oct 4;13(10):e0205065. doi: 10.1371/journal.pone.0205065. eCollection 2018.


Termites shape their collective behavioural response based on stage of infection.

Davis HE, Meconcelli S, Radek R, McMahon DP.

Sci Rep. 2018 Sep 26;8(1):14433. doi: 10.1038/s41598-018-32721-7.


Correction to: Differences in bone quality and strength between Asian and Caucasian young men.

Kepley AL, Nishiyama KK, Zhou B, Wang J, Zhang C, McMahon DJ, Foley KF, Walker MD, Guo XE, Shane E, Nickolas TL.

Osteoporos Int. 2018 Nov;29(11):2581. doi: 10.1007/s00198-018-4684-5.


Factors Associated With Progression of Lung Function Abnormalities in HIV-Infected Individuals.

Li Y, Nouraie SM, Kessinger C, Weinman R, Huang L, Greenblatt RM, Kleerup E, Kingsley L, McMahon D, Fitzpatrick M, Morris A.

J Acquir Immune Defic Syndr. 2018 Dec 1;79(4):501-509. doi: 10.1097/QAI.0000000000001840.


Angiogenic response of rat hippocampal vasculature to focused ultrasound-mediated increases in blood-brain barrier permeability.

McMahon D, Mah E, Hynynen K.

Sci Rep. 2018 Aug 15;8(1):12178. doi: 10.1038/s41598-018-30825-8.


Photoperiod during maternal pregnancy and lifetime depression in offspring.

Devore EE, Chang SC, Okereke OI, McMahon DG, Schernhammer ES.

J Psychiatr Res. 2018 Sep;104:169-175. doi: 10.1016/j.jpsychires.2018.08.004. Epub 2018 Aug 3.


Comparative Effect of rhPTH(1-84) on Bone Mineral Density and Trabecular Bone Score in Hypoparathyroidism and Postmenopausal Osteoporosis.

Cipriani C, Pepe J, Silva BC, Rubin MR, Cusano NE, McMahon DJ, Nieddu L, Angelozzi M, Biamonte F, Diacinti D, Hans D, Minisola S, Bilezikian JP.

J Bone Miner Res. 2018 Dec;33(12):2132-2139. doi: 10.1002/jbmr.3554. Epub 2018 Aug 8.


Computational modelling of solvent effects in a prolific solvatomorphic porous organic cage.

McMahon DP, Stephenson A, Chong SY, Little MA, Jones JTA, Cooper AI, Day GM.

Faraday Discuss. 2018 Oct 26;211(0):383-399. doi: 10.1039/c8fd00031j.


The North-South Divide: Substance Use Risk, Care Engagement, and Viral Suppression Among Hospitalized Human Immunodeficiency Virus-Infected Patients in 11 US Cities.

Philbin MM, Feaster DJ, Gooden L, Duan R, Das M, Jacobs P, Lucas GM, Batey DS, Nijhawan A, Jacobson JM, Mandler R, Daar E, McMahon DK, Armstrong WS, Del Rio C, Metsch LR.

Clin Infect Dis. 2019 Jan 1;68(1):146-149. doi: 10.1093/cid/ciy506.


Emerging Viruses in Bees: From Molecules to Ecology.

McMahon DP, Wilfert L, Paxton RJ, Brown MJF.

Adv Virus Res. 2018;101:251-291. doi: 10.1016/bs.aivir.2018.02.008. Epub 2018 May 7. Review.


Three-dimensional transcranial microbubble imaging for guiding volumetric ultrasound-mediated blood-brain barrier opening.

Jones RM, Deng L, Leung K, McMahon D, O'Reilly MA, Hynynen K.

Theranostics. 2018 Apr 16;8(11):2909-2926. doi: 10.7150/thno.24911. eCollection 2018.


Practical considerations for transitioning early childhood interventions to scale: lessons from the Saving Brains portfolio.

Radner JM, Ferrer MJS, McMahon D, Shankar AH, Silver KL.

Ann N Y Acad Sci. 2018 May;1419(1):230-248. doi: 10.1111/nyas.13684.


Bioinformatics Meets Virology: The European Virus Bioinformatics Center's Second Annual Meeting.

Ibrahim B, Arkhipova K, Andeweg AC, Posada-Céspedes S, Enault F, Gruber A, Koonin EV, Kupczok A, Lemey P, McHardy AC, McMahon DP, Pickett BE, Robertson DL, Scheuermann RH, Zhernakova A, Zwart MP, Schönhuth A, Dutilh BE, Marz M.

Viruses. 2018 May 14;10(5). pii: E256. doi: 10.3390/v10050256.


A new era of virus bioinformatics.

Ibrahim B, McMahon DP, Hufsky F, Beer M, Deng L, Mercier PL, Palmarini M, Thiel V, Marz M.

Virus Res. 2018 Jun 2;251:86-90. doi: 10.1016/j.virusres.2018.05.009. Epub 2018 May 8. Review.


Robust Trabecular Microstructure in Type 2 Diabetes Revealed by Individual Trabecula Segmentation Analysis of HR-pQCT Images.

Starr JF, Bandeira LC, Agarwal S, Shah AM, Nishiyama KK, Hu Y, McMahon DJ, Guo XE, Silverberg SJ, Rubin MR.

J Bone Miner Res. 2018 Sep;33(9):1665-1675. doi: 10.1002/jbmr.3465. Epub 2018 Jun 15.


Reply to Kovacs et al.: Concerning acute inflammatory response following focused ultrasound and microbubbles in the brain.

McMahon D, Hynynen K.

Theranostics. 2018 Mar 8;8(8):2249-2250. doi: 10.7150/thno.25468. eCollection 2018. No abstract available.


Randomized phase 2 trial of monthly vitamin D to prevent respiratory complications in children with sickle cell disease.

Lee MT, Kattan M, Fennoy I, Arpadi SM, Miller RL, Cremers S, McMahon DJ, Nieves JW, Brittenham GM.

Blood Adv. 2018 May 8;2(9):969-978. doi: 10.1182/bloodadvances.2017013979.


Termite soldiers contribute to social immunity by synthesizing potent oral secretions.

He S, Johnston PR, Kuropka B, Lokatis S, Weise C, Plarre R, Kunte HJ, McMahon DP.

Insect Mol Biol. 2018 Oct;27(5):564-576. doi: 10.1111/imb.12499. Epub 2018 Jul 24.


Photoperiodic Programming of the SCN and Its Role in Photoperiodic Output.

Tackenberg MC, McMahon DG.

Neural Plast. 2018 Jan 9;2018:8217345. doi: 10.1155/2018/8217345. eCollection 2018. Review.


Cumulative Antiretroviral Exposure Measured in Hair Is Not Associated With Measures of HIV Persistence or Inflammation Among Individuals on Suppressive ART.

Gandhi M, Gandhi RT, Stefanescu A, Bosch RJ, Cyktor JC, Horng H, Louie A, Phung N, Eron JJ, Hogg E, Macatangay BJC, Hensel C, Fletcher CV, Mellors JW, McMahon DK; A5321 Team.

J Infect Dis. 2018 Jun 20;218(2):234-238. doi: 10.1093/infdis/jiy011.


A Novel Combination Therapy for Patients With Dry Eye Disease: A Pilot Study.

Smith W, McMahon D, Nymark M.

Altern Ther Health Med. 2018 May;24(3):12-15.


Virologists-Heroes need weapons.

Hufsky F, Ibrahim B, Beer M, Deng L, Mercier PL, McMahon DP, Palmarini M, Thiel V, Marz M.

PLoS Pathog. 2018 Feb 8;14(2):e1006771. doi: 10.1371/journal.ppat.1006771. eCollection 2018 Feb. No abstract available.


Decreased Lung Function and All-Cause Mortality in HIV-infected Individuals.

Gingo MR, Nouraie M, Kessinger CJ, Greenblatt RM, Huang L, Kleerup EC, Kingsley L, McMahon DK, Morris A.

Ann Am Thorac Soc. 2018 Feb;15(2):192-199. doi: 10.1513/AnnalsATS.201606-492OC.


Persistence of social jetlag and sleep disruption in healthy young adults.

McMahon DM, Burch JB, Wirth MD, Youngstedt SD, Hardin JW, Hurley TG, Blair SN, Hand GA, Shook RP, Drenowatz C, Burgess S, Hebert JR.

Chronobiol Int. 2018 Mar;35(3):312-328. doi: 10.1080/07420528.2017.1405014. Epub 2017 Dec 12.


A phylogenomic analysis of Marek's disease virus reveals independent paths to virulence in Eurasia and North America.

Trimpert J, Groenke N, Jenckel M, He S, Kunec D, Szpara ML, Spatz SJ, Osterrieder N, McMahon DP.

Evol Appl. 2017 Sep 3;10(10):1091-1101. doi: 10.1111/eva.12515. eCollection 2017 Dec.


Referrals to a perinatal specialist palliative care consult service in Ireland, 2012-2015.

McMahon DL, Twomey M, O'Reilly M, Devins M.

Arch Dis Child Fetal Neonatal Ed. 2018 Nov;103(6):F573-F576. doi: 10.1136/archdischild-2017-313183. Epub 2017 Nov 9.


Acute Inflammatory Response Following Increased Blood-Brain Barrier Permeability Induced by Focused Ultrasound is Dependent on Microbubble Dose.

McMahon D, Hynynen K.

Theranostics. 2017 Sep 15;7(16):3989-4000. doi: 10.7150/thno.21630. eCollection 2017.


Optimization of transcostal phased-array refocusing using sparse semidefinite relaxation method.

Almekkawy M, McMahon D, Alqarni H, Jiayu He.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:1449-1452. doi: 10.1109/EMBC.2017.8037107.


T-cell responses targeting HIV Nef uniquely correlate with infected cell frequencies after long-term antiretroviral therapy.

Thomas AS, Jones KL, Gandhi RT, McMahon DK, Cyktor JC, Chan D, Huang SH, Truong R, Bosque A, Macedo AB, Kovacs C, Benko E, Eron JJ, Bosch RJ, Lalama CM, Simmens S, Walker BD, Mellors JW, Jones RB.

PLoS Pathog. 2017 Sep 20;13(9):e1006629. doi: 10.1371/journal.ppat.1006629. eCollection 2017 Sep.


Plant flavones enhance antimicrobial activity of respiratory epithelial cell secretions against Pseudomonas aeruginosa.

Hariri BM, McMahon DB, Chen B, Adappa ND, Palmer JN, Kennedy DW, Lee RJ.

PLoS One. 2017 Sep 20;12(9):e0185203. doi: 10.1371/journal.pone.0185203. eCollection 2017.


Hot topic: Geographical distribution and strain diversity of Lactobacillus wasatchensis isolated from cheese with unwanted gas formation.

Culumber M, McMahon DJ, Ortakci F, Montierth L, Villalba B, Broadbent JR, Oberg CJ.

J Dairy Sci. 2017 Nov;100(11):8764-8767. doi: 10.3168/jds.2017-13375. Epub 2017 Sep 13.

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