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Syntrophus aciditrophicus uses the same enzymes in a reversible manner to degrade and synthesize aromatic and alicyclic acids.

James KL, Kung JW, Crable BR, Mouttaki H, Sieber JR, Nguyen HH, Yang Y, Xie Y, Erde J, Wofford NQ, Karr EA, Loo JA, Ogorzalek Loo RR, Gunsalus RP, McInerney MJ.

Environ Microbiol. 2019 May;21(5):1833-1846. doi: 10.1111/1462-2920.14601.


Genome Sequence of Acetomicrobium hydrogeniformans OS1.

Cook LE, Gang SS, Ihlan A, Maune M, Tanner RS, McInerney MJ, Weinstock G, Lobos EA, Gunsalus RP.

Genome Announc. 2018 Jun 28;6(26). pii: e00581-18. doi: 10.1128/genomeA.00581-18.


Syntrophomonas wolfei Uses an NADH-Dependent, Ferredoxin-Independent [FeFe]-Hydrogenase To Reoxidize NADH.

Losey NA, Mus F, Peters JW, Le HM, McInerney MJ.

Appl Environ Microbiol. 2017 Sep 29;83(20). pii: e01335-17. doi: 10.1128/AEM.01335-17. Print 2017 Oct 15.


Operation-driven heterogeneity and overlooked feed-associated populations in global anaerobic digester microbiome.

Mei R, Nobu MK, Narihiro T, Kuroda K, Muñoz Sierra J, Wu Z, Ye L, Lee PKH, Lee PH, van Lier JB, McInerney MJ, Kamagata Y, Liu WT.

Water Res. 2017 Nov 1;124:77-84. doi: 10.1016/j.watres.2017.07.050. Epub 2017 Jul 20.


Hematite Reduction Buffers Acid Generation and Enhances Nutrient Uptake by a Fermentative Iron Reducing Bacterium, Orenia metallireducens Strain Z6.

Dong Y, Sanford RA, Chang YJ, McInerney MJ, Fouke BW.

Environ Sci Technol. 2017 Jan 3;51(1):232-242. doi: 10.1021/acs.est.6b04126. Epub 2016 Dec 22.


Membrane Complexes of Syntrophomonas wolfei Involved in Syntrophic Butyrate Degradation and Hydrogen Formation.

Crable BR, Sieber JR, Mao X, Alvarez-Cohen L, Gunsalus R, Ogorzalek Loo RR, Nguyen H, McInerney MJ.

Front Microbiol. 2016 Nov 9;7:1795. eCollection 2016.


Pyrophosphate-Dependent ATP Formation from Acetyl Coenzyme A in Syntrophus aciditrophicus, a New Twist on ATP Formation.

James KL, Ríos-Hernández LA, Wofford NQ, Mouttaki H, Sieber JR, Sheik CS, Nguyen HH, Yang Y, Xie Y, Erde J, Rohlin L, Karr EA, Loo JA, Ogorzalek Loo RR, Hurst GB, Gunsalus RP, Szweda LI, McInerney MJ.

MBio. 2016 Aug 16;7(4). pii: e01208-16. doi: 10.1128/mBio.01208-16.


Methanogenic paraffin degradation proceeds via alkane addition to fumarate by 'Smithella' spp. mediated by a syntrophic coupling with hydrogenotrophic methanogens.

Wawrik B, Marks CR, Davidova IA, McInerney MJ, Pruitt S, Duncan KE, Suflita JM, Callaghan AV.

Environ Microbiol. 2016 Sep;18(8):2604-19. doi: 10.1111/1462-2920.13374. Epub 2016 Jun 27.


The role of Rnf in ion gradient formation in Desulfovibrio alaskensis.

Wang L, Bradstock P, Li C, McInerney MJ, Krumholz LR.

PeerJ. 2016 Apr 14;4:e1919. doi: 10.7717/peerj.1919. eCollection 2016.


Complete genome sequence of Methanospirillum hungatei type strain JF1.

Gunsalus RP, Cook LE, Crable B, Rohlin L, McDonald E, Mouttaki H, Sieber JR, Poweleit N, Zhou H, Lapidus AL, Daligault HE, Land M, Gilna P, Ivanova N, Kyrpides N, Culley DE, McInerney MJ.

Stand Genomic Sci. 2016 Jan 6;11:2. doi: 10.1186/s40793-015-0124-8. eCollection 2016.


Two pathways for glutamate biosynthesis in the syntrophic bacterium Syntrophus aciditrophicus.

Kim M, Le HM, Xie X, Feng X, Tang YJ, Mouttaki H, McInerney MJ, Buckel W.

Appl Environ Microbiol. 2015 Dec;81(24):8434-44. doi: 10.1128/AEM.02323-15. Epub 2015 Oct 2.


Proteomic analysis reveals metabolic and regulatory systems involved in the syntrophic and axenic lifestyle of Syntrophomonas wolfei.

Sieber JR, Crable BR, Sheik CS, Hurst GB, Rohlin L, Gunsalus RP, McInerney MJ.

Front Microbiol. 2015 Feb 11;6:115. doi: 10.3389/fmicb.2015.00115. eCollection 2015.


Syntrophic growth of Desulfovibrio alaskensis requires genes for H2 and formate metabolism as well as those for flagellum and biofilm formation.

Krumholz LR, Bradstock P, Sheik CS, Diao Y, Gazioglu O, Gorby Y, McInerney MJ.

Appl Environ Microbiol. 2015 Apr;81(7):2339-48. doi: 10.1128/AEM.03358-14. Epub 2015 Jan 23.


Anaerobic hydrocarbon and fatty acid metabolism by syntrophic bacteria and their impact on carbon steel corrosion.

Lyles CN, Le HM, Beasley WH, McInerney MJ, Suflita JM.

Front Microbiol. 2014 Apr 1;5:114. doi: 10.3389/fmicb.2014.00114. eCollection 2014.


Roles of thermophilic thiosulfate-reducing bacteria and methanogenic archaea in the biocorrosion of oil pipelines.

Liang R, Grizzle RS, Duncan KE, McInerney MJ, Suflita JM.

Front Microbiol. 2014 Mar 6;5:89. doi: 10.3389/fmicb.2014.00089. eCollection 2014.


The importance of hydrogen and formate transfer for syntrophic fatty, aromatic and alicyclic metabolism.

Sieber JR, Le HM, McInerney MJ.

Environ Microbiol. 2014 Jan;16(1):177-88. doi: 10.1111/1462-2920.12269. Epub 2013 Oct 6.


Membrane protein complex of APS reductase and Qmo is present in Desulfovibrio vulgaris and Desulfovibrio alaskensis.

Krumholz LR, Wang L, Beck DA, Wang T, Hackett M, Mooney B, Juba TR, McInerney MJ, Meyer B, Wall JD, Stahl DA.

Microbiology. 2013 Oct;159(Pt 10):2162-8. doi: 10.1099/mic.0.063818-0. Epub 2013 Jul 10.


Complete genome sequence of Syntrophobacter fumaroxidans strain (MPOB(T)).

Plugge CM, Henstra AM, Worm P, Swarts DC, Paulitsch-Fuchs AH, Scholten JC, Lykidis A, Lapidus AL, Goltsman E, Kim E, McDonald E, Rohlin L, Crable BR, Gunsalus RP, Stams AJ, McInerney MJ.

Stand Genomic Sci. 2012 Oct 10;7(1):91-106. doi: 10.4056/sigs.2996379. Epub 2012 Sep 26.


Identification and characterization of re-citrate synthase in Syntrophus aciditrophicus.

Kim M, Le H, McInerney MJ, Buckel W.

J Bacteriol. 2013 Apr;195(8):1689-96. doi: 10.1128/JB.02185-12. Epub 2013 Feb 1.


Identification and characterization of the first cholesterol-dependent cytolysins from Gram-negative bacteria.

Hotze EM, Le HM, Sieber JR, Bruxvoort C, McInerney MJ, Tweten RK.

Infect Immun. 2013 Jan;81(1):216-25. doi: 10.1128/IAI.00927-12. Epub 2012 Oct 31.


Genomic insights into syntrophy: the paradigm for anaerobic metabolic cooperation.

Sieber JR, McInerney MJ, Gunsalus RP.

Annu Rev Microbiol. 2012;66:429-52. doi: 10.1146/annurev-micro-090110-102844. Epub 2012 Jul 9. Review.


Exposure of soil microbial communities to chromium and arsenic alters their diversity and structure.

Sheik CS, Mitchell TW, Rizvi FZ, Rehman Y, Faisal M, Hasnain S, McInerney MJ, Krumholz LR.

PLoS One. 2012;7(6):e40059. doi: 10.1371/journal.pone.0040059. Epub 2012 Jun 29.


Metabolism of H2 by Desulfovibrio alaskensis G20 during syntrophic growth on lactate.

Li X, McInerney MJ, Stahl DA, Krumholz LR.

Microbiology. 2011 Oct;157(Pt 10):2912-21. doi: 10.1099/mic.0.051284-0. Epub 2011 Jul 28.


Formate formation and formate conversion in biological fuels production.

Crable BR, Plugge CM, McInerney MJ, Stams AJ.

Enzyme Res. 2011;2011:532536. doi: 10.4061/2011/532536. Epub 2011 May 24.


Importance of the long-chain fatty acid beta-hydroxylating cytochrome P450 enzyme YbdT for lipopeptide biosynthesis in Bacillus subtilis strain OKB105.

Youssef NH, Wofford N, McInerney MJ.

Int J Mol Sci. 2011;12(3):1767-86. doi: 10.3390/ijms12031767. Epub 2011 Mar 8.


The genome sequence of Desulfatibacillum alkenivorans AK-01: a blueprint for anaerobic alkane oxidation.

Callaghan AV, Morris BE, Pereira IA, McInerney MJ, Austin RN, Groves JT, Kukor JJ, Suflita JM, Young LY, Zylstra GJ, Wawrik B.

Environ Microbiol. 2012 Jan;14(1):101-13. doi: 10.1111/j.1462-2920.2011.02516.x. Epub 2011 Jun 8.


Biosurfactant-producing Bacillus are present in produced brines from Oklahoma oil reservoirs with a wide range of salinities.

Simpson DR, Natraj NR, McInerney MJ, Duncan KE.

Appl Microbiol Biotechnol. 2011 Aug;91(4):1083-93. doi: 10.1007/s00253-011-3326-z. Epub 2011 May 12.


Evidence for syntrophic butyrate metabolism under sulfate-reducing conditions in a hydrocarbon-contaminated aquifer.

Struchtemeyer CG, Duncan KE, McInerney MJ.

FEMS Microbiol Ecol. 2011 May;76(2):289-300. doi: 10.1111/j.1574-6941.2011.01046.x. Epub 2011 Feb 1.


Sequencing of multiple clostridial genomes related to biomass conversion and biofuel production.

Hemme CL, Mouttaki H, Lee YJ, Zhang G, Goodwin L, Lucas S, Copeland A, Lapidus A, Glavina del Rio T, Tice H, Saunders E, Brettin T, Detter JC, Han CS, Pitluck S, Land ML, Hauser LJ, Kyrpides N, Mikhailova N, He Z, Wu L, Van Nostrand JD, Henrissat B, He Q, Lawson PA, Tanner RS, Lynd LR, Wiegel J, Fields MW, Arkin AP, Schadt CW, Stevenson BS, McInerney MJ, Yang Y, Dong H, Xing D, Ren N, Wang A, Huhnke RL, Mielenz JR, Ding SY, Himmel ME, Taghavi S, van der Lelie D, Rubin EM, Zhou J.

J Bacteriol. 2010 Dec;192(24):6494-6. doi: 10.1128/JB.01064-10. Epub 2010 Oct 1.


The genome of Syntrophomonas wolfei: new insights into syntrophic metabolism and biohydrogen production.

Sieber JR, Sims DR, Han C, Kim E, Lykidis A, Lapidus AL, McDonnald E, Rohlin L, Culley DE, Gunsalus R, McInerney MJ.

Environ Microbiol. 2010 Aug;12(8):2289-301. doi: 10.1111/j.1462-2920.2010.02237.x. Epub 2010 May 12.


Biosurfactants. Foreword.

McInerney MJ.

Adv Exp Med Biol. 2010;672:vii-ix. No abstract available.


Syntrophy in anaerobic global carbon cycles.

McInerney MJ, Sieber JR, Gunsalus RP.

Curr Opin Biotechnol. 2009 Dec;20(6):623-32. doi: 10.1016/j.copbio.2009.10.001. Epub 2009 Nov 10. Review.


Listening to microbial conversations.

McInerney MJ.

Microb Biotechnol. 2009 Mar;2(2):141-2. doi: 10.1111/j.1751-7915.2009.00090_10.x. No abstract available.


A molybdopterin oxidoreductase is involved in H2 oxidation in Desulfovibrio desulfuricans G20.

Li X, Luo Q, Wofford NQ, Keller KL, McInerney MJ, Wall JD, Krumholz LR.

J Bacteriol. 2009 Apr;191(8):2675-82. doi: 10.1128/JB.01814-08. Epub 2009 Feb 20.


Microbial processes in oil fields: culprits, problems, and opportunities.

Youssef N, Elshahed MS, McInerney MJ.

Adv Appl Microbiol. 2009;66:141-251. doi: 10.1016/S0065-2164(08)00806-X. Review.


Metabolism of hydroxylated and fluorinated benzoates by Syntrophus aciditrophicus and detection of a fluorodiene metabolite.

Mouttaki H, Nanny MA, McInerney MJ.

Appl Environ Microbiol. 2009 Feb;75(4):998-1004. doi: 10.1128/AEM.01870-08. Epub 2008 Dec 29.


Use of benzoate as an electron acceptor by Syntrophus aciditrophicus grown in pure culture with crotonate.

Mouttaki H, Nanny MA, McInerney MJ.

Environ Microbiol. 2008 Dec;10(12):3265-74. doi: 10.1111/j.1462-2920.2008.01716.x. Epub 2008 Aug 13.


Physiology, ecology, phylogeny, and genomics of microorganisms capable of syntrophic metabolism.

McInerney MJ, Struchtemeyer CG, Sieber J, Mouttaki H, Stams AJ, Schink B, Rohlin L, Gunsalus RP.

Ann N Y Acad Sci. 2008 Mar;1125:58-72. doi: 10.1196/annals.1419.005. Review.


6-Oxocyclohex-1-ene-1-carbonyl-coenzyme A hydrolases from obligately anaerobic bacteria: characterization and identification of its gene as a functional marker for aromatic compounds degrading anaerobes.

Kuntze K, Shinoda Y, Moutakki H, McInerney MJ, Vogt C, Richnow HH, Boll M.

Environ Microbiol. 2008 Jun;10(6):1547-56. doi: 10.1111/j.1462-2920.2008.01570.x. Epub 2008 Feb 28.


Rhamnolipid biosurfactant mixtures for environmental remediation.

Nguyen TT, Youssef NH, McInerney MJ, Sabatini DA.

Water Res. 2008 Mar;42(6-7):1735-43. Epub 2007 Nov 4.


Spatial variability of sulfate reduction in a shallow aquifer.

Musslewhite CL, Swift D, Gilpen J, McInerney MJ.

Environ Microbiol. 2007 Nov;9(11):2810-9.


Basis for formulating biosurfactant mixtures to achieve ultra low interfacial tension values against hydrocarbons.

Youssef NH, Nguyen T, Sabatini DA, McInerney MJ.

J Ind Microbiol Biotechnol. 2007 Jul;34(7):497-507. Epub 2007 May 3.


The genome of Syntrophus aciditrophicus: life at the thermodynamic limit of microbial growth.

McInerney MJ, Rohlin L, Mouttaki H, Kim U, Krupp RS, Rios-Hernandez L, Sieber J, Struchtemeyer CG, Bhattacharyya A, Campbell JW, Gunsalus RP.

Proc Natl Acad Sci U S A. 2007 May 1;104(18):7600-5. Epub 2007 Apr 18.


In situ biosurfactant production by Bacillus strains injected into a limestone petroleum reservoir.

Youssef N, Simpson DR, Duncan KE, McInerney MJ, Folmsbee M, Fincher T, Knapp RM.

Appl Environ Microbiol. 2007 Feb;73(4):1239-47. Epub 2006 Dec 15.


Cyclohexane carboxylate and benzoate formation from crotonate in Syntrophus aciditrophicus.

Mouttaki H, Nanny MA, McInerney MJ.

Appl Environ Microbiol. 2007 Feb;73(3):930-8. Epub 2006 Dec 8.


Importance of 3-hydroxy fatty acid composition of lipopeptides for biosurfactant activity.

Youssef NH, Duncan KE, McInerney MJ.

Appl Environ Microbiol. 2005 Dec;71(12):7690-5.


Evidence for aceticlastic methanogenesis in the presence of sulfate in a gas condensate-contaminated aquifer.

Struchtemeyer CG, Elshahed MS, Duncan KE, McInerney MJ.

Appl Environ Microbiol. 2005 Sep;71(9):5348-53.


Biological control of hog waste odor through stimulated microbial Fe(III) reduction.

Coates JD, Cole KA, Michaelidou U, Patrick J, McInerney MJ, Achenbach LA.

Appl Environ Microbiol. 2005 Aug;71(8):4728-35.


Progress curve analysis for enzyme and microbial kinetic reactions using explicit solutions based on the Lambert W function.

Goudar CT, Harris SK, McInerney MJ, Suflita JM.

J Microbiol Methods. 2004 Dec;59(3):317-26.


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