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In utero DDT exposure and breast density in early menopause by maternal history of breast cancer.

McDonald JA, Cirillo PM, Tehranifar P, Krigbaum NY, Engmann NJ, Cohn BA, Terry MB.

Reprod Toxicol. 2019 Aug 14. pii: S0890-6238(19)30068-1. doi: 10.1016/j.reprotox.2019.08.009. [Epub ahead of print]


Pre-diagnosis alcohol consumption and mortality risk among black women and white women with invasive breast cancer.

Ma H, Malone KE, McDonald JA, Marchbanks PA, Ursin G, Strom BL, Simon MS, Sullivan-Halley J, Bernstein L, Lu Y.

BMC Cancer. 2019 Aug 13;19(1):800. doi: 10.1186/s12885-019-5991-8.


Effects of Fecal Microbiota Transplantation With Oral Capsules in Obese Patients.

Allegretti JR, Kassam Z, Mullish BH, Chiang A, Carrellas M, Hurtado J, Marchesi JR, McDonald JAK, Pechlivanis A, Barker GF, Blanco JM, Garcia-Perez I, Wong WF, Gerardin Y, Silverstein M, Kennedy K, Thompson C.

Clin Gastroenterol Hepatol. 2019 Jul 10. pii: S1542-3565(19)30739-6. doi: 10.1016/j.cgh.2019.07.006. [Epub ahead of print]


Obeticholic acid ameliorates dyslipidemia but not glucose tolerance in mouse model of gestational diabetes.

McIlvride S, Nikolova V, Fan HM, McDonald JAK, Wahlström A, Bellafante E, Jansen E, Adorini L, Shapiro D, Jones P, Marchesi JR, Marschall HU, Williamson C.

Am J Physiol Endocrinol Metab. 2019 Aug 1;317(2):E399-E410. doi: 10.1152/ajpendo.00407.2018. Epub 2019 Jun 25.


Casp8 hypomethylation and neural tube defects in association with polycyclic aromatic hydrocarbon exposure.

Huang Y, Ren A, Wang L, Jin L, Lin S, Li Z, McDonald JA.

Clin Epigenetics. 2019 May 7;11(1):72. doi: 10.1186/s13148-019-0673-6.


Quantitative RNA Analysis Using RNA-Seq.

Myler PJ, McDonald JA, Alcolea PJ, Sur A.

Methods Mol Biol. 2019;1971:95-108. doi: 10.1007/978-1-4939-9210-2_4.


Dietary supplementation with inulin-propionate ester or inulin improves insulin sensitivity in adults with overweight and obesity with distinct effects on the gut microbiota, plasma metabolome and systemic inflammatory responses: a randomised cross-over trial.

Chambers ES, Byrne CS, Morrison DJ, Murphy KG, Preston T, Tedford C, Garcia-Perez I, Fountana S, Serrano-Contreras JI, Holmes E, Reynolds CJ, Roberts JF, Boyton RJ, Altmann DM, McDonald JAK, Marchesi JR, Akbar AN, Riddell NE, Wallis GA, Frost GS.

Gut. 2019 Aug;68(8):1430-1438. doi: 10.1136/gutjnl-2019-318424. Epub 2019 Apr 10.


The Influence of Number and Timing of Pregnancies on Breast Cancer Risk for Women With BRCA1 or BRCA2 Mutations.

Terry MB, Liao Y, Kast K, Antoniou AC, McDonald JA, Mooij TM, Engel C, Nogues C, Buecher B, Mari V, Moretta-Serra J, Gladieff L, Luporsi E, Barrowdale D, Frost D, Henderson A, Brewer C, Evans DG, Eccles D, Cook J, Ong KR, Izatt L, Ahmed M, Morrison PJ, Dommering CJ, Oosterwijk JC, Ausems MGEM, Kriege M, Buys SS, Andrulis IL, John EM, Daly M, Friedlander M, McLachlan SA, Osorio A, Caldes T, Jakubowska A, Simard J, Singer CF, Tan Y, Olah E, Navratilova M, Foretova L, Gerdes AM, Roos-Blom MJ, Arver B, Olsson H, Schmutzler RK, Hopper JL, van Leeuwen FE, Goldgar D, Milne RL, Easton DF, Rookus MA, Andrieu N; EMBRACE, GENEPSO, BCFR, HEBON, kConFab and IBCCS.

JNCI Cancer Spectr. 2018 Dec;2(4):pky078. doi: 10.1093/jncics/pky078. Epub 2019 Mar 8.


Microbial bile salt hydrolases mediate the efficacy of faecal microbiota transplant in the treatment of recurrent Clostridioides difficile infection.

Mullish BH, McDonald JAK, Pechlivanis A, Allegretti JR, Kao D, Barker GF, Kapila D, Petrof EO, Joyce SA, Gahan CGM, Glegola-Madejska I, Williams HRT, Holmes E, Clarke TB, Thursz MR, Marchesi JR.

Gut. 2019 Oct;68(10):1791-1800. doi: 10.1136/gutjnl-2018-317842. Epub 2019 Feb 11.


Disinfectant residual stability leading to disinfectant decay and by-product formation in drinking water distribution systems: A systematic review.

Li RA, McDonald JA, Sathasivan A, Khan SJ.

Water Res. 2019 Apr 15;153:335-348. doi: 10.1016/j.watres.2019.01.020. Epub 2019 Jan 24. Review.


Autotaxin, bile acid profile and effect of ileal bile acid transporter inhibition in primary biliary cholangitis patients with pruritus.

Hegade VS, Pechlivanis A, McDonald JAK, Rees D, Corrigan M, Hirschfield GM, Taylor-Robinson SD, Holmes E, Marchesi JR, Kendrick S, Jones DE.

Liver Int. 2019 May;39(5):967-975. doi: 10.1111/liv.14069. Epub 2019 Feb 25.


In States That Border Mexico, Cesarean Rates Were Highest For Hispanic Women Living In Border Counties In 2015.

McDonald JA, Amatya A, Gard CC, Sigala J.

Health Aff (Millwood). 2019 Feb;38(2):276-286. doi: 10.1377/hlthaff.2018.05369.


α5GABAA subunit-containing receptors and sweetened alcohol cue-induced reinstatement and active sweetened alcohol self-administration in male rats.

Chandler CM, Reeves-Darby J, Jones SA, McDonald JA, Li G, Rahman MT, Cook JM, Platt DM.

Psychopharmacology (Berl). 2019 Jun;236(6):1797-1806. doi: 10.1007/s00213-018-5163-6. Epub 2019 Jan 12.


Do Birth Weight and Weight Gain During Infancy and Early Childhood Explain Variation in Mammographic Density in Women in Midlife? Results From Cohort and Sibling Analyses.

Terry MB, Cohn BA, Goldberg M, Flom JD, Wei Y, Houghton LC, Tehranifar P, McDonald JA, Protacio A, Cirillo P, Michels KB.

Am J Epidemiol. 2019 Feb 1;188(2):294-304. doi: 10.1093/aje/kwy229.


The implementation of omics technologies in cancer microbiome research.

Mullish BH, Osborne LS, Marchesi JR, McDonald JA.

Ecancermedicalscience. 2018 Sep 5;12:864. doi: 10.3332/ecancer.2018.864. eCollection 2018. Review.


Patterns of Screen Time Among Rural Mexican-American Children on the New Mexico-Mexico Border.

McDonald JA, Sroka C, Olivares E, Marin M, Gurrola M, Sharkey JR.

Prev Chronic Dis. 2018 Sep 13;15:E113. doi: 10.5888/pcd15.180070.


Occurrence and bioconcentration of micropollutants in Silver Perch (Bidyanus bidyanus) in a reclaimed water reservoir.

Terechovs AKE, Ansari AJ, McDonald JA, Khan SJ, Hai FI, Knott NA, Zhou J, Nghiem LD.

Sci Total Environ. 2019 Feb 10;650(Pt 1):585-593. doi: 10.1016/j.scitotenv.2018.08.431. Epub 2018 Aug 31.


Trends in Hispanic and non-Hispanic white cesarean delivery rates on the US-Mexico border, 2000-2015.

McDonald JA, Amatya A, Gard CC, Sigala J.

PLoS One. 2018 Sep 5;13(9):e0203550. doi: 10.1371/journal.pone.0203550. eCollection 2018.


Rap1 GTPase promotes coordinated collective cell migration in vivo.

Sawant K, Chen Y, Kotian N, Preuss KM, McDonald JA.

Mol Biol Cell. 2018 Nov 1;29(22):2656-2673. doi: 10.1091/mbc.E17-12-0752. Epub 2018 Aug 29.


Using bioreactors to study the effects of drugs on the human microbiota.

Guzman-Rodriguez M, McDonald JAK, Hyde R, Allen-Vercoe E, Claud EC, Sheth PM, Petrof EO.

Methods. 2018 Oct 1;149:31-41. doi: 10.1016/j.ymeth.2018.08.003. Epub 2018 Aug 11. Review.


Mortality, Ethnicity, and Urbanization Among Children Aged 1-4 Years on the US-Mexico Border.

McDonald JA, Brantley L, Paulozzi LJ.

Public Health Rep. 2018 Sep/Oct;133(5):593-600. doi: 10.1177/0033354918792013. Epub 2018 Aug 10.


Inhibiting Growth of Clostridioides difficile by Restoring Valerate, Produced by the Intestinal Microbiota.

McDonald JAK, Mullish BH, Pechlivanis A, Liu Z, Brignardello J, Kao D, Holmes E, Li JV, Clarke TB, Thursz MR, Marchesi JR.

Gastroenterology. 2018 Nov;155(5):1495-1507.e15. doi: 10.1053/j.gastro.2018.07.014. Epub 2018 Jul 17.


Prevalence of Injuries during Brazilian Jiu-Jitsu Training.

McDonald AR, Murdock FA Jr, McDonald JA, Wolf CJ.

Sports (Basel). 2017 Jun 12;5(2). pii: E39. doi: 10.3390/sports5020039.


Antibiotic-Associated Disruption of Microbiota Composition and Function in Cirrhosis Is Restored by Fecal Transplant.

Mullish BH, McDonald JAK, Thursz MR, Marchesi JR.

Hepatology. 2018 Sep;68(3):1205. doi: 10.1002/hep.30090. No abstract available.


Functional microbiomics: Evaluation of gut microbiota-bile acid metabolism interactions in health and disease.

Mullish BH, Pechlivanis A, Barker GF, Thursz MR, Marchesi JR, McDonald JAK.

Methods. 2018 Oct 1;149:49-58. doi: 10.1016/j.ymeth.2018.04.028. Epub 2018 Apr 26.


Variation in Birth Outcomes by Mother's Country of Birth Among Hispanic Women in the United States, 2013.

DeSisto CL, McDonald JA.

Public Health Rep. 2018 May/Jun;133(3):318-328. doi: 10.1177/0033354918765444. Epub 2018 Apr 13.


Parsing the Paradox: Hispanic Mortality in the US by Detailed Cause of Death.

McDonald JA, Paulozzi LJ.

J Immigr Minor Health. 2019 Apr;21(2):237-245. doi: 10.1007/s10903-018-0737-2.


A biochemical network controlling basal myosin oscillation.

Qin X, Hannezo E, Mangeat T, Liu C, Majumder P, Liu J, Choesmel-Cadamuro V, McDonald JA, Liu Y, Yi B, Wang X.

Nat Commun. 2018 Mar 23;9(1):1210. doi: 10.1038/s41467-018-03574-5.


The fate of trace organic contaminants during anaerobic digestion of primary sludge: A pilot scale study.

Phan HV, Wickham R, Xie S, McDonald JA, Khan SJ, Ngo HH, Guo W, Nghiem LD.

Bioresour Technol. 2018 May;256:384-390. doi: 10.1016/j.biortech.2018.02.040. Epub 2018 Feb 10.


Scope of Knowledge About Zika Among Women in US-Mexico Border Communities.

McDonald JA, Selchau K, Acquah-Baidoo B.

J Community Health. 2018 Aug;43(4):705-716. doi: 10.1007/s10900-018-0474-4.


Body mass index at age 18 years and recent body mass index in relation to risk of breast cancer overall and ER/PR/HER2-defined subtypes in white women and African-American women: a pooled analysis.

Ma H, Ursin G, Xu X, Lee E, Togawa K, Malone KE, Marchbanks PA, McDonald JA, Simon MS, Folger SG, Lu Y, Sullivan-Halley J, Deapen DM, Press MF, Bernstein L.

Breast Cancer Res. 2018 Jan 22;20(1):5. doi: 10.1186/s13058-017-0931-5.


Hair product use, age at menarche and mammographic breast density in multiethnic urban women.

McDonald JA, Tehranifar P, Flom JD, Terry MB, James-Todd T.

Environ Health. 2018 Jan 4;17(1):1. doi: 10.1186/s12940-017-0345-y.


Alcohol consumption and breast cancer-specific and all-cause mortality in women diagnosed with breast cancer at the New York site of the Breast Cancer Family Registry.

Zeinomar N, Thai A, Cloud AJ, McDonald JA, Liao Y, Terry MB.

PLoS One. 2017 Dec 15;12(12):e0189118. doi: 10.1371/journal.pone.0189118. eCollection 2017.


Histopathology, vitellogenin and chemical body burden in mosquitofish (Gambusia holbrooki) sampled from six river sites receiving a gradient of stressors.

Scott PD, Coleman HM, Khan S, Lim R, McDonald JA, Mondon J, Neale PA, Prochazka E, Tremblay LA, Warne MSJ, Leusch FDL.

Sci Total Environ. 2018 Mar;616-617:1638-1648. doi: 10.1016/j.scitotenv.2017.10.148. Epub 2017 Nov 1.


Continuous transformation of chiral pharmaceuticals in enzymatic membrane bioreactors for advanced wastewater treatment.

Nguyen LN, Hai FI, McDonald JA, Khan SJ, Price WE, Nghiem LD.

Water Sci Technol. 2017 Oct;76(7-8):1816-1826. doi: 10.2166/wst.2017.331.


Fecal microbiota transplant from a rational stool donor improves hepatic encephalopathy: A randomized clinical trial.

Mullish BH, McDonald JAK, Thursz MR, Marchesi JR.

Hepatology. 2017 Oct;66(4):1354-1355. doi: 10.1002/hep.29369. Epub 2017 Aug 26. No abstract available.


Beliefs about Genetically Targeted Care in African Americans.

Halbert CH, McDonald JA, Magwood G, Jefferson M.

J Natl Med Assoc. 2017 Summer;109(2):98-106. doi: 10.1016/j.jnma.2017.02.004. Epub 2017 Mar 13.


Maternal cigarette smoking during pregnancy and offspring DNA methylation in midlife.

Tehranifar P, Wu HC, McDonald JA, Jasmine F, Santella RM, Gurvich I, Flom JD, Terry MB.

Epigenetics. 2018;13(2):129-134. doi: 10.1080/15592294.2017.1325065. Epub 2018 Feb 8.


Assessing the potential for trace organic contaminants commonly found in Australian rivers to induce vitellogenin in the native rainbowfish (Melanotaenia fluviatilis) and the introduced mosquitofish (Gambusia holbrooki).

Scott PD, Coleman HM, Colville A, Lim R, Matthews B, McDonald JA, Miranda A, Neale PA, Nugegoda D, Tremblay LA, Leusch FD.

Aquat Toxicol. 2017 Apr;185:105-120. doi: 10.1016/j.aquatox.2017.02.008. Epub 2017 Feb 7.


Reproductive factors and the risk of triple-negative breast cancer in white women and African-American women: a pooled analysis.

Ma H, Ursin G, Xu X, Lee E, Togawa K, Duan L, Lu Y, Malone KE, Marchbanks PA, McDonald JA, Simon MS, Folger SG, Sullivan-Halley J, Deapen DM, Press MF, Bernstein L.

Breast Cancer Res. 2017 Jan 13;19(1):6. doi: 10.1186/s13058-016-0799-9.


Synthetically tuneable biomimetic artificial photosynthetic reaction centres that closely resemble the natural system in purple bacteria.

Lee SH, Blake IM, Larsen AG, McDonald JA, Ohkubo K, Fukuzumi S, Reimers JR, Crossley MJ.

Chem Sci. 2016 Oct 19;7(10):6534-6550. Epub 2016 Jun 16.


Infection and pubertal timing: a systematic review.

McDonald JA, Eng SM, Dina OO, Schooling CM, Terry MB.

J Dev Orig Health Dis. 2016 Dec;7(6):636-651. Review.


Relationship between vaginal microbial dysbiosis, inflammation, and pregnancy outcomes in cervical cerclage.

Kindinger LM, MacIntyre DA, Lee YS, Marchesi JR, Smith A, McDonald JA, Terzidou V, Cook JR, Lees C, Israfil-Bayli F, Faiza Y, Toozs-Hobson P, Slack M, Cacciatore S, Holmes E, Nicholson JK, Teoh TG, Bennett PR.

Sci Transl Med. 2016 Aug 3;8(350):350ra102. doi: 10.1126/scitranslmed.aag1026.


Drosophila Condensin II subunit Chromosome-associated protein D3 regulates cell fate determination through non-cell-autonomous signaling.

Klebanow LR, Peshel EC, Schuster AT, De K, Sarvepalli K, Lemieux ME, Lenoir JJ, Moore AW, McDonald JA, Longworth MS.

Development. 2016 Aug 1;143(15):2791-802. doi: 10.1242/dev.133686. Epub 2016 Jun 17.


Dynamics of cell polarity in tissue morphogenesis: a comparative view from Drosophila and Ciona.

Veeman MT, McDonald JA.

F1000Res. 2016 Jun 2;5. pii: F1000 Faculty Rev-1084. doi: 10.12688/f1000research.8011.1. eCollection 2016. Review.


Dynamic myosin activation promotes collective morphology and migration by locally balancing oppositional forces from surrounding tissue.

Aranjuez G, Burtscher A, Sawant K, Majumder P, McDonald JA.

Mol Biol Cell. 2016 Jun 15;27(12):1898-910. doi: 10.1091/mbc.E15-10-0744. Epub 2016 Apr 27.


The relative importance of reproduction and survival for the conservation of two dolphin populations.

Manlik O, McDonald JA, Mann J, Raudino HC, Bejder L, Krützen M, Connor RC, Heithaus MR, Lacy RC, Sherwin WB.

Ecol Evol. 2016 Apr 20;6(11):3496-3512. doi: 10.1002/ece3.2130. eCollection 2016 Jun.


Epigenetic Biomarkers of Breast Cancer Risk: Across the Breast Cancer Prevention Continuum.

Terry MB, McDonald JA, Wu HC, Eng S, Santella RM.

Adv Exp Med Biol. 2016;882:33-68. doi: 10.1007/978-3-319-22909-6_2. Review.


Alcohol intake from early adulthood to midlife and mammographic density.

McDonald JA, Michels KB, Cohn BA, Flom JD, Tehranifar P, Terry MB.

Cancer Causes Control. 2016 Apr;27(4):493-502. doi: 10.1007/s10552-016-0723-8. Epub 2016 Feb 1.

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