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Items: 1 to 50 of 131

1.

Spatial and temporal patterns of gene expression during neurogenesis in the sea urchin Lytechinus variegatus.

Slota LA, Miranda EM, McClay DR.

Evodevo. 2019 Feb 12;10:2. doi: 10.1186/s13227-019-0115-8. eCollection 2019.

2.

Methods for transplantation of sea urchin blastomeres.

George AN, McClay DR.

Methods Cell Biol. 2019;150:223-233. doi: 10.1016/bs.mcb.2018.11.012. Epub 2018 Dec 21. Review.

PMID:
30777177
3.

Neurogenesis in the sea urchin embryo is initiated uniquely in three domains.

McClay DR, Miranda E, Feinberg SL.

Development. 2018 Nov 9;145(21). pii: dev167742. doi: 10.1242/dev.167742.

4.

Identification of neural transcription factors required for the differentiation of three neuronal subtypes in the sea urchin embryo.

Slota LA, McClay DR.

Dev Biol. 2018 Mar 15;435(2):138-149. doi: 10.1016/j.ydbio.2017.12.015. Epub 2018 Jan 10.

5.

New insights from a high-resolution look at gastrulation in the sea urchin, Lytechinus variegatus.

Martik ML, McClay DR.

Mech Dev. 2017 Dec;148:3-10. doi: 10.1016/j.mod.2017.06.005. Epub 2017 Jul 3.

6.

Sea Urchin Morphogenesis.

McClay DR.

Curr Top Dev Biol. 2016;117:15-29. doi: 10.1016/bs.ctdb.2015.11.003. Epub 2016 Jan 7. Review.

PMID:
26969970
7.

Developmental gene regulatory networks in sea urchins and what we can learn from them.

Martik ML, Lyons DC, McClay DR.

F1000Res. 2016 Feb 22;5. pii: F1000 Faculty Rev-203. doi: 10.12688/f1000research.7381.1. eCollection 2016. Review.

8.

Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris.

Israel JW, Martik ML, Byrne M, Raff EC, Raff RA, McClay DR, Wray GA.

PLoS Biol. 2016 Mar 4;14(3):e1002391. doi: 10.1371/journal.pbio.1002391. eCollection 2016 Mar. Erratum in: PLoS Biol. 2016 Jun;14(6):e1002489.

9.

Contribution of hedgehog signaling to the establishment of left-right asymmetry in the sea urchin.

Warner JF, Miranda EL, McClay DR.

Dev Biol. 2016 Mar 15;411(2):314-324. doi: 10.1016/j.ydbio.2016.02.008. Epub 2016 Feb 9.

10.

Deployment of a retinal determination gene network drives directed cell migration in the sea urchin embryo.

Martik ML, McClay DR.

Elife. 2015 Sep 24;4. pii: e08827. doi: 10.7554/eLife.08827.

11.

Specification to biomineralization: following a single cell type as it constructs a skeleton.

Lyons DC, Martik ML, Saunders LR, McClay DR.

Integr Comp Biol. 2014 Oct;54(4):723-33. doi: 10.1093/icb/icu087. Epub 2014 Jul 9.

12.

Delayed transition to new cell fates during cellular reprogramming.

Cheng X, Lyons DC, Socolar JE, McClay DR.

Dev Biol. 2014 Jul 15;391(2):147-57. doi: 10.1016/j.ydbio.2014.04.015. Epub 2014 Apr 26.

13.

Sub-circuits of a gene regulatory network control a developmental epithelial-mesenchymal transition.

Saunders LR, McClay DR.

Development. 2014 Apr;141(7):1503-13. doi: 10.1242/dev.101436. Epub 2014 Mar 5.

14.

Perturbations to the hedgehog pathway in sea urchin embryos.

Warner JF, McClay DR.

Methods Mol Biol. 2014;1128:211-21. doi: 10.1007/978-1-62703-974-1_14.

PMID:
24567217
15.

Branching out: origins of the sea urchin larval skeleton in development and evolution.

McIntyre DC, Lyons DC, Martik M, McClay DR.

Genesis. 2014 Mar;52(3):173-85. doi: 10.1002/dvg.22756. Epub 2014 Mar 5. Review.

16.

Short-range Wnt5 signaling initiates specification of sea urchin posterior ectoderm.

McIntyre DC, Seay NW, Croce JC, McClay DR.

Development. 2013 Dec;140(24):4881-9. doi: 10.1242/dev.095844. Epub 2013 Nov 13.

17.

Hedgehog signaling requires motile cilia in the sea urchin.

Warner JF, McCarthy AM, Morris RL, McClay DR.

Mol Biol Evol. 2014 Jan;31(1):18-22. doi: 10.1093/molbev/mst176. Epub 2013 Oct 11.

18.

Left-right asymmetry in the sea urchin embryo: BMP and the asymmetrical origins of the adult.

Warner JF, Lyons DC, McClay DR.

PLoS Biol. 2012;10(10):e1001404. doi: 10.1371/journal.pbio.1001404. Epub 2012 Oct 9.

19.

Morphogenesis in sea urchin embryos: linking cellular events to gene regulatory network states.

Lyons DC, Kaltenbach SL, McClay DR.

Wiley Interdiscip Rev Dev Biol. 2012 Mar-Apr;1(2):231-52. doi: 10.1002/wdev.18. Epub 2011 Dec 27. Review.

20.

Frizzled1/2/7 signaling directs β-catenin nuclearisation and initiates endoderm specification in macromeres during sea urchin embryogenesis.

Lhomond G, McClay DR, Gache C, Croce JC.

Development. 2012 Feb;139(4):816-25. doi: 10.1242/dev.072215.

21.

Wnt6 activates endoderm in the sea urchin gene regulatory network.

Croce J, Range R, Wu SY, Miranda E, Lhomond G, Peng JC, Lepage T, McClay DR.

Development. 2011 Aug;138(15):3297-306. doi: 10.1242/dev.058792.

22.

Evolutionary crossroads in developmental biology: sea urchins.

McClay DR.

Development. 2011 Jul;138(13):2639-48. doi: 10.1242/dev.048967. Review.

23.
24.

Dynamics of Delta/Notch signaling on endomesoderm segregation in the sea urchin embryo.

Croce JC, McClay DR.

Development. 2010 Jan;137(1):83-91. doi: 10.1242/dev.044149.

25.
26.

Hedgehog signaling patterns mesoderm in the sea urchin.

Walton KD, Warner J, Hertzler PH, McClay DR.

Dev Biol. 2009 Jul 1;331(1):26-37. doi: 10.1016/j.ydbio.2009.04.018. Epub 2009 Apr 23.

27.

Chordin is required for neural but not axial development in sea urchin embryos.

Bradham CA, Oikonomou C, Kühn A, Core AB, Modell JW, McClay DR, Poustka AJ.

Dev Biol. 2009 Apr 15;328(2):221-33. doi: 10.1016/j.ydbio.2009.01.027. Epub 2009 Jan 29.

28.

Evolution of the Wnt pathways.

Croce JC, McClay DR.

Methods Mol Biol. 2008;469:3-18. doi: 10.1007/978-1-60327-469-2_1.

29.

LvNumb works synergistically with Notch signaling to specify non-skeletal mesoderm cells in the sea urchin embryo.

Range RC, Glenn TD, Miranda E, McClay DR.

Development. 2008 Aug;135(14):2445-54. doi: 10.1242/dev.018101. Epub 2008 Jun 11.

30.

Twist is an essential regulator of the skeletogenic gene regulatory network in the sea urchin embryo.

Wu SY, Yang YP, McClay DR.

Dev Biol. 2008 Jul 15;319(2):406-15. doi: 10.1016/j.ydbio.2008.04.003. Epub 2008 Apr 15.

31.

Quantitative measurement of cell adhesion using centrifugal force.

McClay DR, Hertzler PL.

Curr Protoc Cell Biol. 2001 May;Chapter 9:Unit 9.2. doi: 10.1002/0471143030.cb0902s00.

PMID:
18228392
32.

Ingression of primary mesenchyme cells of the sea urchin embryo: a precisely timed epithelial mesenchymal transition.

Wu SY, Ferkowicz M, McClay DR.

Birth Defects Res C Embryo Today. 2007 Dec;81(4):241-52. doi: 10.1002/bdrc.20113. Review.

PMID:
18228256
33.

The Snail repressor is required for PMC ingression in the sea urchin embryo.

Wu SY, McClay DR.

Development. 2007 Mar;134(6):1061-70. Epub 2007 Feb 7.

34.

The genome of the sea urchin Strongylocentrotus purpuratus.

Sea Urchin Genome Sequencing Consortium, Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, Foltz KR, Hamdoun A, Hynes RO, Klein WH, Marzluff W, McClay DR, Morris RL, Mushegian A, Rast JP, Smith LC, Thorndyke MC, Vacquier VD, Wessel GM, Wray G, Zhang L, Elsik CG, Ermolaeva O, Hlavina W, Hofmann G, Kitts P, Landrum MJ, Mackey AJ, Maglott D, Panopoulou G, Poustka AJ, Pruitt K, Sapojnikov V, Song X, Souvorov A, Solovyev V, Wei Z, Whittaker CA, Worley K, Durbin KJ, Shen Y, Fedrigo O, Garfield D, Haygood R, Primus A, Satija R, Severson T, Gonzalez-Garay ML, Jackson AR, Milosavljevic A, Tong M, Killian CE, Livingston BT, Wilt FH, Adams N, Bellé R, Carbonneau S, Cheung R, Cormier P, Cosson B, Croce J, Fernandez-Guerra A, Genevière AM, Goel M, Kelkar H, Morales J, Mulner-Lorillon O, Robertson AJ, Goldstone JV, Cole B, Epel D, Gold B, Hahn ME, Howard-Ashby M, Scally M, Stegeman JJ, Allgood EL, Cool J, Judkins KM, McCafferty SS, Musante AM, Obar RA, Rawson AP, Rossetti BJ, Gibbons IR, Hoffman MP, Leone A, Istrail S, Materna SC, Samanta MP, Stolc V, Tongprasit W, Tu Q, Bergeron KF, Brandhorst BP, Whittle J, Berney K, Bottjer DJ, Calestani C, Peterson K, Chow E, Yuan QA, Elhaik E, Graur D, Reese JT, Bosdet I, Heesun S, Marra MA, Schein J, Anderson MK, Brockton V, Buckley KM, Cohen AH, Fugmann SD, Hibino T, Loza-Coll M, Majeske AJ, Messier C, Nair SV, Pancer Z, Terwilliger DP, Agca C, Arboleda E, Chen N, Churcher AM, Hallböök F, Humphrey GW, Idris MM, Kiyama T, Liang S, Mellott D, Mu X, Murray G, Olinski RP, Raible F, Rowe M, Taylor JS, Tessmar-Raible K, Wang D, Wilson KH, Yaguchi S, Gaasterland T, Galindo BE, Gunaratne HJ, Juliano C, Kinukawa M, Moy GW, Neill AT, Nomura M, Raisch M, Reade A, Roux MM, Song JL, Su YH, Townley IK, Voronina E, Wong JL, Amore G, Branno M, Brown ER, Cavalieri V, Duboc V, Duloquin L, Flytzanis C, Gache C, Lapraz F, Lepage T, Locascio A, Martinez P, Matassi G, Matranga V, Range R, Rizzo F, Röttinger E, Beane W, Bradham C, Byrum C, Glenn T, Hussain S, Manning G, Miranda E, Thomason R, Walton K, Wikramanayke A, Wu SY, Xu R, Brown CT, Chen L, Gray RF, Lee PY, Nam J, Oliveri P, Smith J, Muzny D, Bell S, Chacko J, Cree A, Curry S, Davis C, Dinh H, Dugan-Rocha S, Fowler J, Gill R, Hamilton C, Hernandez J, Hines S, Hume J, Jackson L, Jolivet A, Kovar C, Lee S, Lewis L, Miner G, Morgan M, Nazareth LV, Okwuonu G, Parker D, Pu LL, Thorn R, Wright R.

Science. 2006 Nov 10;314(5801):941-52. Erratum in: Science. 2007 Feb 9;315(5813):766.

35.

Protein tyrosine and serine-threonine phosphatases in the sea urchin, Strongylocentrotus purpuratus: identification and potential functions.

Byrum CA, Walton KD, Robertson AJ, Carbonneau S, Thomason RT, Coffman JA, McClay DR.

Dev Biol. 2006 Dec 1;300(1):194-218. Epub 2006 Aug 25.

36.

A genome-wide survey of the evolutionarily conserved Wnt pathways in the sea urchin Strongylocentrotus purpuratus.

Croce JC, Wu SY, Byrum C, Xu R, Duloquin L, Wikramanayake AH, Gache C, McClay DR.

Dev Biol. 2006 Dec 1;300(1):121-31. Epub 2006 Aug 24.

37.

Genomics and expression profiles of the Hedgehog and Notch signaling pathways in sea urchin development.

Walton KD, Croce JC, Glenn TD, Wu SY, McClay DR.

Dev Biol. 2006 Dec 1;300(1):153-64. Epub 2006 Sep 1.

38.

Repression of mesodermal fate by foxa, a key endoderm regulator of the sea urchin embryo.

Oliveri P, Walton KD, Davidson EH, McClay DR.

Development. 2006 Nov;133(21):4173-81.

39.

The sea urchin kinome: a first look.

Bradham CA, Foltz KR, Beane WS, Arnone MI, Rizzo F, Coffman JA, Mushegian A, Goel M, Morales J, Geneviere AM, Lapraz F, Robertson AJ, Kelkar H, Loza-Coll M, Townley IK, Raisch M, Roux MM, Lepage T, Gache C, McClay DR, Manning G.

Dev Biol. 2006 Dec 1;300(1):180-93. Epub 2006 Sep 12.

40.

Lineage-specific expansions provide genomic complexity among sea urchin GTPases.

Beane WS, Voronina E, Wessel GM, McClay DR.

Dev Biol. 2006 Dec 1;300(1):165-79. Epub 2006 Aug 24.

41.

The genomic underpinnings of apoptosis in Strongylocentrotus purpuratus.

Robertson AJ, Croce J, Carbonneau S, Voronina E, Miranda E, McClay DR, Coffman JA.

Dev Biol. 2006 Dec 1;300(1):321-34. Epub 2006 Aug 30.

42.

The canonical Wnt pathway in embryonic axis polarity.

Croce JC, McClay DR.

Semin Cell Dev Biol. 2006 Apr;17(2):168-74. Epub 2006 Apr 25. Review.

PMID:
16714126
43.

p38 MAPK in development and cancer.

Bradham C, McClay DR.

Cell Cycle. 2006 Apr;5(8):824-8. Epub 2006 Apr 17. Review.

PMID:
16627995
44.

RhoA regulates initiation of invagination, but not convergent extension, during sea urchin gastrulation.

Beane WS, Gross JM, McClay DR.

Dev Biol. 2006 Apr 1;292(1):213-25. Epub 2006 Feb 3.

45.

Frizzled5/8 is required in secondary mesenchyme cells to initiate archenteron invagination during sea urchin development.

Croce J, Duloquin L, Lhomond G, McClay DR, Gache C.

Development. 2006 Feb;133(3):547-57. Epub 2006 Jan 5.

46.

p38 MAPK is essential for secondary axis specification and patterning in sea urchin embryos.

Bradham CA, McClay DR.

Development. 2006 Jan;133(1):21-32. Epub 2005 Nov 30.

47.
49.

Methods for embryo dissociation and analysis of cell adhesion.

McClay DR.

Methods Cell Biol. 2004;74:311-29. Review. No abstract available.

PMID:
15575613
50.

Blastomere isolation and transplantation.

Sweet H, Amemiya S, Ransick A, Minokawa T, McClay DR, Wikramanayake A, Kuraishi R, Kiyomoto M, Nishida H, Henry J.

Methods Cell Biol. 2004;74:243-71. Review. No abstract available.

PMID:
15575610

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