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Integrating comprehensive two-dimensional gas chromatography mass spectrometry and parallel two-dimensional liquid chromatography mass spectrometry for untargeted metabolomics.

Prodhan MAI, Shi B, Song M, He L, Yuan F, Yin X, Bohman P, McClain CJ, Zhang X.

Analyst. 2019 Jul 21;144(14):4331-4341. doi: 10.1039/c9an00560a. Epub 2019 Jun 13.


Profiling of Polar Metabolites in Mouse Feces Using Four Analytical Platforms to Study the Effects Of Cathelicidin-Related Antimicrobial Peptide in Alcoholic Liver Disease.

He L, Li F, Yin X, Bohman P, Kim S, McClain CJ, Feng W, Zhang X.

J Proteome Res. 2019 Jul 5;18(7):2875-2884. doi: 10.1021/acs.jproteome.9b00181. Epub 2019 Jun 12.


Chalcone Derivative L6H21 Reduces EtOH + LPS-Induced Liver Injury Through Inhibition of NLRP3 Inflammasome Activation.

Kong X, Wu G, Chen S, Zhang L, Li F, Shao T, Ren L, Chen SY, Zhang H, McClain CJ, Feng W.

Alcohol Clin Exp Res. 2019 Jun 4. doi: 10.1111/acer.14120. [Epub ahead of print]


Mechanisms, Biomarkers and Targets for Therapy in Alcohol-associated Liver Injury: From Genetics to Nutrition: Summary of the ISBRA 2018 Symposium.

Kirpich IA, Warner DR, Feng W, Joshi-Barve S, McClain CJ, Seth D, Zhong W, Zhou Z, Osna NA, Kharbanda KK.

Alcohol. 2019 May 23. pii: S0741-8329(19)30069-2. doi: 10.1016/j.alcohol.2019.05.004. [Epub ahead of print] Review.


Are Sexual Minorities Less Likely to Participate in Surveys? An Examination of Proxy Nonresponse Measures and Associated Biases with Sexual Orientation in a Population-Based Health Survey.

Lee S, Fredriksen-Goldsen KI, McClain C, Kim HJ, Suzer-Gurtekin ZT.

Field methods. 2018 Aug;30(3):208-224. doi: 10.1177/1525822X18777736. Epub 2018 Jun 14.


Likes, comments, and shares of marine organism imagery on Facebook.

McClain CR.

PeerJ. 2019 Apr 24;7:e6795. doi: 10.7717/peerj.6795. eCollection 2019.


Phosphodiesterase 4 Inhibition as a Therapeutic Target for Alcoholic Liver Disease: From Bedside to Bench.

Rodriguez WE, Wahlang B, Wang Y, Zhang J, Vadhanam MV, Joshi-Barve S, Bauer P, Cannon R, Ahmadi AR, Sun Z, Cameron A, Barve S, Maldonado C, McClain C, Gobejishvili L.

Hepatology. 2019 May 13. doi: 10.1002/hep.30761. [Epub ahead of print]


Biomarkers of Macrophage Activation and Immune Danger Signals Predict Clinical Outcomes in Alcoholic Hepatitis.

Saha B, Tornai D, Kodys K, Adejumo A, Lowe P, McClain C, Mitchell M, McCullough A, Dasarathy S, Kroll-Desrosiers A, Barton B, Radaeva S, Szabo G.

Hepatology. 2019 Mar 19. doi: 10.1002/hep.30617. [Epub ahead of print]


Simultaneous Quantification of Nucleosides and Nucleotides from Biological Samples.

He L, Wei X, Ma X, Yin X, Song M, Donninger H, Yaddanapudi K, McClain CJ, Zhang X.

J Am Soc Mass Spectrom. 2019 Jun;30(6):987-1000. doi: 10.1007/s13361-019-02140-7. Epub 2019 Mar 7.


Porphyromonas gingivalis as a Possible Risk Factor in the Development/Severity of Acute Alcoholic Hepatitis.

Zhou Y, Vatsalya V, Gobejishvili L, Lamont RJ, McClain CJ, Feng W.

Hepatol Commun. 2018 Dec 14;3(2):293-304. doi: 10.1002/hep4.1296. eCollection 2019 Feb.


Ergogenic Effect of Neuromuscular Electrical Stimulation During Rest and Submaximal Exercise.

Tseh W, Champion HM, Ek S, Frazier WR, Kinslow AE, McClain CW, Barreira TV.

Int J Exerc Sci. 2019 Jan 1;12(3):203-313. eCollection 2019.


Introduction to the Virtual Issue "Translational Studies in AUD: Liver Disease".

Kirpich IA, McClain CJ.

Alcohol Clin Exp Res. 2019 Apr;43(4):593-596. doi: 10.1111/acer.13967. Epub 2019 Feb 27. No abstract available.


Health Professional Training and Capacity Strengthening Through International Academic Partnerships: The First Five Years of the Human Resources for Health Program in Rwanda.

Cancedda C, Cotton P, Shema J, Rulisa S, Riviello R, Adams LV, Farmer PE, Kagwiza JN, Kyamanywa P, Mukamana D, Mumena C, Tumusiime DK, Mukashyaka L, Ndenga E, Twagirumugabe T, Mukara KB, Dusabejambo V, Walker TD, Nkusi E, Bazzett-Matabele L, Butera A, Rugwizangoga B, Kabayiza JC, Kanyandekwe S, Kalisa L, Ntirenganya F, Dixson J, Rogo T, McCall N, Corden M, Wong R, Mukeshimana M, Gatarayiha A, Ntagungira EK, Yaman A, Musabeyezu J, Sliney A, Nuthulaganti T, Kernan M, Okwi P, Rhatigan J, Barrow J, Wilson K, Levine AC, Reece R, Koster M, Moresky RT, O'Flaherty JE, Palumbo PE, Ginwalla R, Binanay CA, Thielman N, Relf M, Wright R, Hill M, Chyun D, Klar RT, McCreary LL, Hughes TL, Moen M, Meeks V, Barrows B, Durieux ME, McClain CD, Bunts A, Calland FJ, Hedt-Gauthier B, Milner D, Raviola G, Smith SE, Tuteja M, Magriples U, Rastegar A, Arnold L, Magaziner I, Binagwaho A.

Int J Health Policy Manag. 2018 Aug 6;7(11):1024-1039. doi: 10.15171/ijhpm.2018.61.


Copper-Fructose Interactions: A Novel Mechanism in the Pathogenesis of NAFLD.

Song M, Vos MB, McClain CJ.

Nutrients. 2018 Nov 21;10(11). pii: E1815. doi: 10.3390/nu10111815. Review.


Plant-Derived Exosomal MicroRNAs Shape the Gut Microbiota.

Teng Y, Ren Y, Sayed M, Hu X, Lei C, Kumar A, Hutchins E, Mu J, Deng Z, Luo C, Sundaram K, Sriwastva MK, Zhang L, Hsieh M, Reiman R, Haribabu B, Yan J, Jala VR, Miller DM, Van Keuren-Jensen K, Merchant ML, McClain CJ, Park JW, Egilmez NK, Zhang HG.

Cell Host Microbe. 2018 Nov 14;24(5):637-652.e8. doi: 10.1016/j.chom.2018.10.001. Epub 2018 Oct 25.


Alterations in Serum Zinc and Polyunsaturated Fatty Acid Concentrations in Treatment-Naive HIV-Diagnosed Alcohol-Dependent Subjects with Liver Injury.

Vatsalya V, Cave MC, Kumar R, Srivastava S, Khanal S, Jenson AB, Schwandt ML, Barve SS, Ramchandani VA, McClain CJ.

AIDS Res Hum Retroviruses. 2019 Jan;35(1):92-99. doi: 10.1089/AID.2018.0124. Epub 2018 Dec 11.


Ethanol and unsaturated dietary fat induce unique patterns of hepatic ω-6 and ω-3 PUFA oxylipins in a mouse model of alcoholic liver disease.

Warner DR, Liu H, Ghosh Dastidar S, Warner JB, Prodhan MAI, Yin X, Zhang X, Feldstein AE, Gao B, Prough RA, McClain CJ, Kirpich IA.

PLoS One. 2018 Sep 26;13(9):e0204119. doi: 10.1371/journal.pone.0204119. eCollection 2018.


Urinary acrolein metabolite levels in severe acute alcoholic hepatitis patients.

Vatsalya V, Kong M, Gobejishvili L, Chen WY, Srivastava S, Barve S, McClain C, Joshi-Barve S.

Am J Physiol Gastrointest Liver Physiol. 2019 Jan 1;316(1):G115-G122. doi: 10.1152/ajpgi.00209.2018. Epub 2018 Sep 20.


Energetic increases lead to niche packing in deep-sea wood falls.

McClain CR, Nunnally C, Chapman ASA, Barry JP.

Biol Lett. 2018 Sep 12;14(9). pii: 20180294. doi: 10.1098/rsbl.2018.0294.


Sprague Dawley Rag2-Null Rats Created from Engineered Spermatogonial Stem Cells Are Immunodeficient and Permissive to Human Xenografts.

Noto FK, Adjan-Steffey V, Tong M, Ravichandran K, Zhang W, Arey A, McClain CB, Ostertag E, Mazhar S, Sangodkar J, DiFeo A, Crawford J, Narla G, Jamling TY.

Mol Cancer Ther. 2018 Nov;17(11):2481-2489. doi: 10.1158/1535-7163.MCT-18-0156. Epub 2018 Sep 11.


Oxidized linoleic acid metabolites induce liver mitochondrial dysfunction, apoptosis, and NLRP3 activation in mice.

Schuster S, Johnson CD, Hennebelle M, Holtmann T, Taha AY, Kirpich IA, Eguchi A, Ramsden CE, Papouchado BG, McClain CJ, Feldstein AE.

J Lipid Res. 2018 Sep;59(9):1597-1609. doi: 10.1194/jlr.M083741. Epub 2018 Jul 3.


Effects of diets enriched in linoleic acid and its peroxidation products on brain fatty acids, oxylipins, and aldehydes in mice.

Ramsden CE, Hennebelle M, Schuster S, Keyes GS, Johnson CD, Kirpich IA, Dahlen JE, Horowitz MS, Zamora D, Feldstein AE, McClain CJ, Muhlhausler BS, Makrides M, Gibson RA, Taha AY.

Biochim Biophys Acta Mol Cell Biol Lipids. 2018 Oct;1863(10):1206-1213. doi: 10.1016/j.bbalip.2018.07.007. Epub 2018 Jul 25.


Corrigendum to 'Role of cAMP and phosphodiesterase signaling in liver health and disease' [Cell. Signal. 49 (2018)105-115].

Wahlang B, McClain C, Barve S, Gobejishvili L.

Cell Signal. 2019 Jan;53:414. doi: 10.1016/j.cellsig.2018.06.014. Epub 2018 Jul 2. No abstract available.


Association of serum zinc with markers of liver injury in very heavy drinking alcohol-dependent patients.

Vatsalya V, Kong M, Cave MC, Liu N, Schwandt ML, George DT, Ramchandani VA, McClain CJ.

J Nutr Biochem. 2018 Sep;59:49-55. doi: 10.1016/j.jnutbio.2018.05.003. Epub 2018 May 12.


Hexavalent Chromium Sources and Distribution in California Groundwater.

Hausladen DM, Alexander-Ozinskas A, McClain C, Fendorf S.

Environ Sci Technol. 2018 Aug 7;52(15):8242-8251. doi: 10.1021/acs.est.7b06627. Epub 2018 Jul 13.


Simultaneous quantification of straight-chain and branched-chain short chain fatty acids by gas chromatography mass spectrometry.

He L, Prodhan MAI, Yuan F, Yin X, Lorkiewicz PK, Wei X, Feng W, McClain C, Zhang X.

J Chromatogr B Analyt Technol Biomed Life Sci. 2018 Aug 15;1092:359-367. doi: 10.1016/j.jchromb.2018.06.028. Epub 2018 Jun 18.


Role of cAMP and phosphodiesterase signaling in liver health and disease.

Wahlang B, McClain C, Barve S, Gobejishvili L.

Cell Signal. 2018 Sep;49:105-115. doi: 10.1016/j.cellsig.2018.06.005. Epub 2018 Jun 11. Erratum in: Cell Signal. 2019 Jan;53:414.


Intestinal HIF-1α deletion exacerbates alcoholic liver disease by inducing intestinal dysbiosis and barrier dysfunction.

Shao T, Zhao C, Li F, Gu Z, Liu L, Zhang L, Wang Y, He L, Liu Y, Liu Q, Chen Y, Donde H, Wang R, Jala VR, Barve S, Chen SY, Zhang X, Chen Y, McClain CJ, Feng W.

J Hepatol. 2018 Oct;69(4):886-895. doi: 10.1016/j.jhep.2018.05.021. Epub 2018 May 25.


Jumonji: Welcome to the World of Interferon Signaling in Alcohol and HCV.

Moghe A, Barve SS, McClain CJ, Joshi-Barve S.

Cell Mol Gastroenterol Hepatol. 2017 Dec 9;5(2):163-164. doi: 10.1016/j.jcmgh.2017.11.009. eCollection 2018. No abstract available.


Liver Disease in a Residential Cohort With Elevated Polychlorinated Biphenyl Exposures.

Clair HB, Pinkston CM, Rai SN, Pavuk M, Dutton ND, Brock GN, Prough RA, Falkner KC, McClain CJ, Cave MC.

Toxicol Sci. 2018 Jul 1;164(1):39-49. doi: 10.1093/toxsci/kfy076.


Role of Nutrition in Alcoholic Liver Disease: Summary of the Symposium at the ESBRA 2017 Congress.

Kharbanda KK, Ronis MJJ, Shearn CT, Petersen DR, Zakhari S, Warner DR, Feldstein AE, McClain CJ, Kirpich IA.

Biomolecules. 2018 Mar 26;8(2). pii: E16. doi: 10.3390/biom8020016.


Energetic tradeoffs control the size distribution of aquatic mammals.

Gearty W, McClain CR, Payne JL.

Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):4194-4199. doi: 10.1073/pnas.1712629115. Epub 2018 Mar 26.


Surface fitting for calculating the second dimension retention index in comprehensive two-dimensional gas chromatography mass spectrometry.

Prodhan MAI, Yin X, Kim S, McClain C, Zhang X.

J Chromatogr A. 2018 Mar 2;1539:62-70. doi: 10.1016/j.chroma.2018.01.049. Epub 2018 Jan 31.


Rodent Models of Alcoholic Liver Disease: Role of Binge Ethanol Administration.

Ghosh Dastidar S, Warner JB, Warner DR, McClain CJ, Kirpich IA.

Biomolecules. 2018 Jan 13;8(1). pii: E3. doi: 10.3390/biom8010003. Review.


Guidelines and checklists for short-term missions in global pediatric surgery: Recommendations from the American Academy of Pediatrics Delivery of Surgical Care Global Health Subcommittee, American Pediatric Surgical Association Global Pediatric Surgery Committee, Society for Pediatric Anesthesia Committee on International Education and Service, and American Pediatric Surgical Nurses Association, Inc. Global Health Special Interest Group.

Butler M, Drum E, Evans FM, Fitzgerald T, Fraser J, Holterman AX, Jen H, Kynes JM, Kreiss J, McClain CD, Newton M, Nwomeh B, O'Neill J, Ozgediz D, Politis G, Rice H, Rothstein D, Sanchez J, Singleton M, Yudkowitz FS.

J Pediatr Surg. 2018 Apr;53(4):828-836. doi: 10.1016/j.jpedsurg.2017.11.037. Epub 2017 Nov 15.


Increased energy differentially increases richness and abundance of optimal body sizes in deep-sea wood falls.

McClain CR, Barry JP, Webb TJ.

Ecology. 2018 Jan;99(1):184-195. doi: 10.1002/ecy.2055. Epub 2017 Dec 4.


More Alcohol, More Liver Injury: Not Always True.

Kirpich I, McClain C.

Alcohol Alcohol. 2017 Nov 1;52(6):627-628. doi: 10.1093/alcalc/agx064. Review.


Dietary copper-fructose interactions alter gut microbial activity in male rats.

Song M, Li X, Zhang X, Shi H, Vos MB, Wei X, Wang Y, Gao H, Rouchka EC, Yin X, Zhou Z, Prough RA, Cave MC, McClain CJ.

Am J Physiol Gastrointest Liver Physiol. 2018 Jan 1;314(1):G119-G130. doi: 10.1152/ajpgi.00378.2016. Epub 2017 Oct 12.


Development, Prevention, and Treatment of Alcohol-Induced Organ Injury: The Role of Nutrition.

Barve S, Chen SY, Kirpich I, Watson WH, Mcclain C.

Alcohol Res. 2017;38(2):289-302. Review.


Acrolein Disrupts Tight Junction Proteins and Causes Endoplasmic Reticulum Stress-Mediated Epithelial Cell Death Leading to Intestinal Barrier Dysfunction and Permeability.

Chen WY, Wang M, Zhang J, Barve SS, McClain CJ, Joshi-Barve S.

Am J Pathol. 2017 Dec;187(12):2686-2697. doi: 10.1016/j.ajpath.2017.08.015. Epub 2017 Sep 19.


Dietary Linoleic Acid and Its Oxidized Metabolites Exacerbate Liver Injury Caused by Ethanol via Induction of Hepatic Proinflammatory Response in Mice.

Warner DR, Liu H, Miller ME, Ramsden CE, Gao B, Feldstein AE, Schuster S, McClain CJ, Kirpich IA.

Am J Pathol. 2017 Oct;187(10):2232-2245. doi: 10.1016/j.ajpath.2017.06.008.


Activation of autophagy attenuates EtOH-LPS-induced hepatic steatosis and injury through MD2 associated TLR4 signaling.

Kong X, Yang Y, Ren L, Shao T, Li F, Zhao C, Liu L, Zhang H, McClain CJ, Feng W.

Sci Rep. 2017 Aug 24;7(1):9292. doi: 10.1038/s41598-017-09045-z.


Phosphodiesterase 4b expression plays a major role in alcohol-induced neuro-inflammation.

Avila DV, Myers SA, Zhang J, Kharebava G, McClain CJ, Kim HY, Whittemore SR, Gobejishvili L, Barve S.

Neuropharmacology. 2017 Oct;125:376-385. doi: 10.1016/j.neuropharm.2017.08.011. Epub 2017 Aug 12.


Rate of hepatitis C viral clearance by human livers in human patients: Liver transplantation modeling primary infection and implications for studying entry inhibition.

Hughes MG Jr, Tucker WW, Reddy S, Brier ME, Koch D, McClain CJ, Jonsson CB, Matoba N, Chung D.

PLoS One. 2017 Jul 21;12(7):e0180719. doi: 10.1371/journal.pone.0180719. eCollection 2017.


The Evolution of Energetic Scaling across the Vertebrate Tree of Life.

Uyeda JC, Pennell MW, Miller ET, Maia R, McClain CR.

Am Nat. 2017 Aug;190(2):185-199. doi: 10.1086/692326. Epub 2017 May 31.


Analysis of Stable Isotope Assisted Metabolomics Data Acquired by High Resolution Mass Spectrometry.

Wei X, Lorkiewicz PK, Shi B, Salabei JK, Hill BG, Kim S, McClain CJ, Zhang X.

Anal Methods. 2017 Apr 21;9(15):2275-2283. doi: 10.1039/C7AY00291B. Epub 2017 Mar 10.


Practices and promises of Facebook for science outreach: Becoming a "Nerd of Trust".

McClain CR.

PLoS Biol. 2017 Jun 27;15(6):e2002020. doi: 10.1371/journal.pbio.2002020. eCollection 2017 Jun.


Low Hepatic Tissue Copper in Pediatric Nonalcoholic Fatty Liver Disease.

Mendoza M, Caltharp S, Song M, Collin L, Konomi JV, McClain CJ, Vos MB.

J Pediatr Gastroenterol Nutr. 2017 Jul;65(1):89-92. doi: 10.1097/MPG.0000000000001571.


Analysis of stable isotope assisted metabolomics data acquired by GC-MS.

Wei X, Shi B, Koo I, Yin X, Lorkiewicz P, Suhail H, Rattan R, Giri S, McClain CJ, Zhang X.

Anal Chim Acta. 2017 Aug 8;980:25-32. doi: 10.1016/j.aca.2017.05.002. Epub 2017 May 13.

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