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Pneumococcal Disease: A Systematic Review of Health Utilities, Resource Use, Costs, and Economic Evaluations of Interventions.

Shiri T, Khan K, Keaney K, Mukherjee G, McCarthy ND, Petrou S.

Value Health. 2019 Nov;22(11):1329-1344. doi: 10.1016/j.jval.2019.06.011. Epub 2019 Sep 10. Review.


A systematic review of source attribution of human campylobacteriosis using multilocus sequence typing.

Cody AJ, Maiden MC, Strachan NJ, McCarthy ND.

Euro Surveill. 2019 Oct;24(43). doi: 10.2807/1560-7917.ES.2019.24.43.1800696.


Two centuries of immunisation in the UK (part II).

Lang S, Loving S, McCarthy ND, Ramsay ME, Salisbury D, Pollard AJ.

Arch Dis Child. 2020 Mar;105(3):216-222. doi: 10.1136/archdischild-2019-317707. Epub 2019 Jul 13.


Two centuries of immunisation in the UK (part 1).

Lang S, Loving S, McCarthy ND, Ramsay ME, Salisbury D, Pollard AJ.

Arch Dis Child. 2020 Feb;105(2):115-121. doi: 10.1136/archdischild-2019-317314. Epub 2019 Jul 4.


The impact of childhood pneumococcal vaccination on hospital admissions in England: a whole population observational study.

Shiri T, McCarthy ND, Petrou S.

BMC Infect Dis. 2019 Jun 10;19(1):510. doi: 10.1186/s12879-019-4119-8.


Universal antenatal screening for group B streptococcus may cause more harm than good.

Seedat F, Geppert J, Stinton C, Patterson J, Freeman K, Johnson SA, Fraser H, Brown CS, Uthman OA, Tan B, Robinson ER, McCarthy ND, Clarke A, Marshall J, Visintin C, Mackie A, Taylor-Phillips S.

BMJ. 2019 Feb 20;364:l463. doi: 10.1136/bmj.l463. No abstract available.


Online market research panel members as controls in case-control studies to investigate gastrointestinal disease outbreaks: early experiences and lessons learnt from the UK - ERRATUM.

Mook P, McCormick J, Kanagarajah S, Adak GK, Cleary P, Elson R, Gobin M, Hawker J, Inns T, Sinclair C, Trienekens SCM, Vivancos R, McCarthy ND.

Epidemiol Infect. 2018 Sep;146(12):1611. doi: 10.1017/S0950268818000213. Epub 2018 Jul 19. No abstract available.


Bacterial Load and Molecular Markers Associated With Early-onset Group B Streptococcus: A Systematic Review and Meta-analysis.

Seedat F, Brown CS, Stinton C, Patterson J, Geppert J, Freeman K, Tan B, Johnson SA, Fraser H, Uthman OA, Robinson ER, McCarthy ND, Clarke A, Taylor-Phillips S.

Pediatr Infect Dis J. 2018 Dec;37(12):e306-e314. doi: 10.1097/INF.0000000000002050.


Online market research panel members as controls in case-control studies to investigate gastrointestinal disease outbreaks: early experiences and lessons learnt from the UK.

Mook P, McCormick J, Kanagarajah S, Adak GK, Cleary P, Elson R, Gobin M, Hawker J, Inns T, Sinclair C, Trienekens SCM, Vivancos R, McCarthy ND.

Epidemiol Infect. 2018 Mar;146(4):458-464. doi: 10.1017/S0950268817002953. Epub 2018 Jan 15. Erratum in: Epidemiol Infect. 2018 Sep;146(12):1611.


Comparative efficacy of drugs for treating giardiasis: a systematic update of the literature and network meta-analysis of randomized clinical trials.

Ordóñez-Mena JM, McCarthy ND, Fanshawe TR.

J Antimicrob Chemother. 2018 Mar 1;73(3):596-606. doi: 10.1093/jac/dkx430.


Adverse events in women and children who have received intrapartum antibiotic prophylaxis treatment: a systematic review.

Seedat F, Stinton C, Patterson J, Geppert J, Tan B, Robinson ER, McCarthy ND, Uthman OA, Freeman K, Johnson SA, Fraser H, Brown CS, Clarke A, Taylor-Phillips S.

BMC Pregnancy Childbirth. 2017 Jul 26;17(1):247. doi: 10.1186/s12884-017-1432-3. Review.


Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

Pascoe B, Méric G, Yahara K, Wimalarathna H, Murray S, Hitchings MD, Sproston EL, Carrillo CD, Taboada EN, Cooper KK, Huynh S, Cody AJ, Jolley KA, Maiden MCJ, McCarthy ND, Didelot X, Parker CT, Sheppard SK.

Mol Ecol. 2017 Sep;26(17):4497-4508. doi: 10.1111/mec.14176. Epub 2017 Jun 19.


Core Genome Multilocus Sequence Typing Scheme for Stable, Comparative Analyses of Campylobacter jejuni and C. coli Human Disease Isolates.

Cody AJ, Bray JE, Jolley KA, McCarthy ND, Maiden MCJ.

J Clin Microbiol. 2017 Jul;55(7):2086-2097. doi: 10.1128/JCM.00080-17. Epub 2017 Apr 26.


Indirect effects of childhood pneumococcal conjugate vaccination on invasive pneumococcal disease: a systematic review and meta-analysis.

Shiri T, Datta S, Madan J, Tsertsvadze A, Royle P, Keeling MJ, McCarthy ND, Petrou S.

Lancet Glob Health. 2017 Jan;5(1):e51-e59. doi: 10.1016/S2214-109X(16)30306-0. Review.


A quantitative review of healthcare professionals' questions to a local immunization advice service: 4299 enquiries from 3 years.

Ford KJ, Lang S, Pollard AJ, McCarthy ND.

J Public Health (Oxf). 2016 Sep;38(3):578-584. Epub 2015 Aug 27.


Integration of Genomic and Other Epidemiologic Data to Investigate and Control a Cross-Institutional Outbreak of Streptococcus pyogenes.

Chalker VJ, Smith A, Al-Shahib A, Botchway S, Macdonald E, Daniel R, Phillips S, Platt S, Doumith M, Tewolde R, Coelho J, Jolley KA, Underwood A, McCarthy ND.

Emerg Infect Dis. 2016 Jun;22(6):973-80. doi: 10.3201/eid2206.142050.


Genetic Diversity of Campylobacter jejuni and Campylobacter coli Isolates from Conventional Broiler Flocks and the Impacts of Sampling Strategy and Laboratory Method.

Vidal AB, Colles FM, Rodgers JD, McCarthy ND, Davies RH, Maiden MCJ, Clifton-Hadley FA.

Appl Environ Microbiol. 2016 Apr 4;82(8):2347-2355. doi: 10.1128/AEM.03693-15. Print 2016 Apr.


Wild bird-associated Campylobacter jejuni isolates are a consistent source of human disease, in Oxfordshire, United Kingdom.

Cody AJ, McCarthy ND, Bray JE, Wimalarathna HM, Colles FM, Jansen van Rensburg MJ, Dingle KE, Waldenström J, Maiden MC.

Environ Microbiol Rep. 2015 Oct;7(5):782-8. doi: 10.1111/1758-2229.12314. Epub 2015 Sep 8.


Partial Failure of Milk Pasteurization as a Risk for the Transmission of Campylobacter From Cattle to Humans.

Fernandes AM, Balasegaram S, Willis C, Wimalarathna HM, Maiden MC, McCarthy ND.

Clin Infect Dis. 2015 Sep 15;61(6):903-9. doi: 10.1093/cid/civ431. Epub 2015 Jun 10.


The long-term dynamics of Campylobacter colonizing a free-range broiler breeder flock: an observational study.

Colles FM, McCarthy ND, Bliss CM, Layton R, Maiden MC.

Environ Microbiol. 2015 Apr;17(4):938-46. doi: 10.1111/1462-2920.12415. Epub 2014 Mar 11.


Descriptive epidemiology of school outbreaks of seasonal influenza B during 2012/2013 in the Thames Valley, United Kingdom.

McCann LJ, Suchanek O, McCarthy ND, Mannes T.

Public Health. 2014 Dec;128(12):1121-4. doi: 10.1016/j.puhe.2014.08.016. Epub 2014 Nov 25. No abstract available.


McCarthy et al. respond to "evaluating case-chaos for outbreaks investigations".

McCarthy ND, Gillespie IA, Mook P, Adak GK, O'Brien SJ.

Am J Epidemiol. 2014 Aug 15;180(4):412-3. doi: 10.1093/aje/kwu120. Epub 2014 Jul 2. No abstract available.


Immunisation errors reported to a vaccine advice service: intelligence to improve practice.

Lang S, Ford KJ, John T, Pollard AJ, McCarthy ND.

Qual Prim Care. 2014;22(3):139-46.


Assessment of Mycobacterium tuberculosis transmission in Oxfordshire, UK, 2007-12, with whole pathogen genome sequences: an observational study.

Walker TM, Lalor MK, Broda A, Ortega LS, Morgan M, Parker L, Churchill S, Bennett K, Golubchik T, Giess AP, Del Ojo Elias C, Jeffery KJ, Bowler ICJW, Laurenson IF, Barrett A, Drobniewski F, McCarthy ND, Anderson LF, Abubakar I, Thomas HL, Monk P, Smith EG, Walker AS, Crook DW, Peto TEA, Conlon CP.

Lancet Respir Med. 2014 Apr;2(4):285-292. doi: 10.1016/S2213-2600(14)70027-X. Epub 2014 Mar 4.


Approaches to the detection of very small, common, and easily missed outbreaks that together contribute substantially to human Cryptosporidium infection.

Briggs AD, Boxall NS, Van Santen D, Chalmers RM, McCarthy ND.

Epidemiol Infect. 2014 Sep;142(9):1869-76. doi: 10.1017/S0950268814000673. Epub 2014 Apr 2.


Three authors reply.

McCarthy ND, Gillespie IA, O'Brien SJ.

Am J Epidemiol. 2013 May 1;177(9):1022. doi: 10.1093/aje/kwt058. Epub 2013 Apr 12. No abstract available.


Re: "The 'case-chaos study' L adjunct or alternative to conventional case-control study methodology". The authors reply.

Gillespie IA, Mook P, Adak GK, O'Brien SJ, McCarthy ND.

Am J Epidemiol. 2014 Jan 15;179(2):262-3. No abstract available.


Self-reported adverse events in adolescents aged 13-18 years after mass vaccination with pertussis-containing vaccine, following a school outbreak.

McCann LJ, Ford KJ, Pollard AJ, Kulkarni R, Amirthalingam G, Smith A, McCarthy ND.

Public Health. 2013 Dec;127(12):1133-6. doi: 10.1016/j.puhe.2013.09.007. Epub 2013 Nov 22. No abstract available.


MLST revisited: the gene-by-gene approach to bacterial genomics.

Maiden MC, Jansen van Rensburg MJ, Bray JE, Earle SG, Ford SA, Jolley KA, McCarthy ND.

Nat Rev Microbiol. 2013 Oct;11(10):728-36. doi: 10.1038/nrmicro3093. Epub 2013 Sep 2. Review.


Duck liver-associated outbreak of Campylobacteriosis among humans, United Kingdom, 2011.

Abid M, Wimalarathna H, Mills J, Saldana L, Pang W, Richardson JF, Maiden MC, McCarthy ND.

Emerg Infect Dis. 2013 Aug;19(8):1310-3. doi: 10.3201/eid1908.121535.


Widespread acquisition of antimicrobial resistance among Campylobacter isolates from UK retail poultry and evidence for clonal expansion of resistant lineages.

Wimalarathna HM, Richardson JF, Lawson AJ, Elson R, Meldrum R, Little CL, Maiden MC, McCarthy ND, Sheppard SK.

BMC Microbiol. 2013 Jul 15;13:160. doi: 10.1186/1471-2180-13-160.


Real-time genomic epidemiological evaluation of human Campylobacter isolates by use of whole-genome multilocus sequence typing.

Cody AJ, McCarthy ND, Jansen van Rensburg M, Isinkaye T, Bentley SD, Parkhill J, Dingle KE, Bowler IC, Jolley KA, Maiden MC.

J Clin Microbiol. 2013 Aug;51(8):2526-34. doi: 10.1128/JCM.00066-13. Epub 2013 May 22.


UK hantavirus, renal failure, and pet rats.

Taori SK, Jameson LJ, Campbell A, Drew PJ, McCarthy ND, Hart J, Osborne JC, Sudhanva M, Brooks TJ.

Lancet. 2013 Mar 23;381(9871):1070. doi: 10.1016/S0140-6736(13)60599-1. Epub 2013 Mar 22. No abstract available.


Marked host specificity and lack of phylogeographic population structure of Campylobacter jejuni in wild birds.

Griekspoor P, Colles FM, McCarthy ND, Hansbro PM, Ashhurst-Smith C, Olsen B, Hasselquist D, Maiden MC, Waldenström J.

Mol Ecol. 2013 Mar;22(5):1463-72. doi: 10.1111/mec.12144. Epub 2013 Jan 29.


Progressive genome-wide introgression in agricultural Campylobacter coli.

Sheppard SK, Didelot X, Jolley KA, Darling AE, Pascoe B, Meric G, Kelly DJ, Cody A, Colles FM, Strachan NJ, Ogden ID, Forbes K, French NP, Carter P, Miller WG, McCarthy ND, Owen R, Litrup E, Egholm M, Affourtit JP, Bentley SD, Parkhill J, Maiden MC, Falush D.

Mol Ecol. 2013 Feb;22(4):1051-64. doi: 10.1111/mec.12162. Epub 2012 Dec 20.


The "case-chaos study" as an adjunct or alternative to conventional case-control study methodology.

Gillespie IA, Mook P, Adak GK, O'Brien SJ, McCarthy ND.

Am J Epidemiol. 2012 Sep 15;176(6):497-505. Epub 2012 Aug 8.


Molecular epidemiology of human Campylobacter jejuni shows association between seasonal and international patterns of disease.

McCarthy ND, Gillespie IA, Lawson AJ, Richardson J, Neal KR, Hawtin PR, Maiden MC, O'Brien SJ.

Epidemiol Infect. 2012 Dec;140(12):2247-55. doi: 10.1017/S0950268812000192. Epub 2012 Feb 28.


The prevalence of Campylobacter amongst a free-range broiler breeder flock was primarily affected by flock age.

Colles FM, McCarthy ND, Layton R, Maiden MC.

PLoS One. 2011;6(12):e22825. doi: 10.1371/journal.pone.0022825. Epub 2011 Dec 12.


Campylobacter populations in wild and domesticated Mallard ducks (Anas platyrhynchos).

Colles FM, Ali JS, Sheppard SK, McCarthy ND, Maiden MC.

Environ Microbiol Rep. 2011 Oct;3(5):574-580.


Changes in serogroup and genotype prevalence among carried meningococci in the United Kingdom during vaccine implementation.

Ibarz-Pavón AB, Maclennan J, Andrews NJ, Gray SJ, Urwin R, Clarke SC, Walker AM, Evans MR, Kroll JS, Neal KR, Ala'aldeen D, Crook DW, Cann K, Harrison S, Cunningham R, Baxter D, Kaczmarski E, McCarthy ND, Jolley KA, Cameron JC, Stuart JM, Maiden MC.

J Infect Dis. 2011 Oct 1;204(7):1046-53. doi: 10.1093/infdis/jir466.


Transmission and control in an institutional pandemic influenza A(H1N1) 2009 outbreak.

Arinaminpathy N, Raphaely N, Saldana L, Hodgekiss C, Dandridge J, Knox K, McCarthy ND.

Epidemiol Infect. 2012 Jun;140(6):1102-10. doi: 10.1017/S0950268811001518. Epub 2011 Aug 23.


Niche segregation and genetic structure of Campylobacter jejuni populations from wild and agricultural host species.

Sheppard SK, Colles FM, McCarthy ND, Strachan NJ, Ogden ID, Forbes KJ, Dallas JF, Maiden MC.

Mol Ecol. 2011 Aug;20(16):3484-90. doi: 10.1111/j.1365-294X.2011.05179.x. Epub 2011 Jul 18.


Introgression in the genus Campylobacter: generation and spread of mosaic alleles.

Sheppard SK, McCarthy ND, Jolley KA, Maiden MCJ.

Microbiology. 2011 Apr;157(Pt 4):1066-1074. doi: 10.1099/mic.0.045153-0. Epub 2011 Jan 6.


Evolution of an agriculture-associated disease causing Campylobacter coli clade: evidence from national surveillance data in Scotland.

Sheppard SK, Dallas JF, Wilson DJ, Strachan NJ, McCarthy ND, Jolley KA, Colles FM, Rotariu O, Ogden ID, Forbes KJ, Maiden MC.

PLoS One. 2010 Dec 15;5(12):e15708. doi: 10.1371/journal.pone.0015708.


Campylobacter genotypes from poultry transportation crates indicate a source of contamination and transmission.

Hastings R, Colles FM, McCarthy ND, Maiden MC, Sheppard SK.

J Appl Microbiol. 2011 Jan;110(1):266-76. doi: 10.1111/j.1365-2672.2010.04883.x. Epub 2010 Nov 9.


Host association of Campylobacter genotypes transcends geographic variation.

Sheppard SK, Colles F, Richardson J, Cody AJ, Elson R, Lawson A, Brick G, Meldrum R, Little CL, Owen RJ, Maiden MC, McCarthy ND.

Appl Environ Microbiol. 2010 Aug;76(15):5269-77. doi: 10.1128/AEM.00124-10. Epub 2010 Jun 4.


Comparison of Campylobacter populations isolated from a free-range broiler flock before and after slaughter.

Colles FM, McCarthy ND, Sheppard SK, Layton R, Maiden MC.

Int J Food Microbiol. 2010 Feb 28;137(2-3):259-64. doi: 10.1016/j.ijfoodmicro.2009.12.021. Epub 2010 Jan 4.


MLST clustering of Campylobacter jejuni isolates from patients with gastroenteritis, reactive arthritis and Guillain-Barré syndrome.

Nielsen LN, Sheppard SK, McCarthy ND, Maiden MC, Ingmer H, Krogfelt KA.

J Appl Microbiol. 2010 Feb;108(2):591-9. doi: 10.1111/j.1365-2672.2009.04444.x. Epub 2009 Jun 25.


Campylobacter genotyping to determine the source of human infection.

Sheppard SK, Dallas JF, Strachan NJ, MacRae M, McCarthy ND, Wilson DJ, Gormley FJ, Falush D, Ogden ID, Maiden MC, Forbes KJ.

Clin Infect Dis. 2009 Apr 15;48(8):1072-8. doi: 10.1086/597402.


Campylobacter genotypes from food animals, environmental sources and clinical disease in Scotland 2005/6.

Sheppard SK, Dallas JF, MacRae M, McCarthy ND, Sproston EL, Gormley FJ, Strachan NJ, Ogden ID, Maiden MC, Forbes KJ.

Int J Food Microbiol. 2009 Aug 31;134(1-2):96-103. doi: 10.1016/j.ijfoodmicro.2009.02.010. Epub 2009 Feb 20.

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