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Items: 48

1.

Long-Term Effects of a Novel Continuous Remote Care Intervention Including Nutritional Ketosis for the Management of Type 2 Diabetes: A 2-Year Non-randomized Clinical Trial.

Athinarayanan SJ, Adams RN, Hallberg SJ, McKenzie AL, Bhanpuri NH, Campbell WW, Volek JS, Phinney SD, McCarter JP.

Front Endocrinol (Lausanne). 2019 Jun 5;10:348. doi: 10.3389/fendo.2019.00348. eCollection 2019.

2.

Post hoc analyses of surrogate markers of non-alcoholic fatty liver disease (NAFLD) and liver fibrosis in patients with type 2 diabetes in a digitally supported continuous care intervention: an open-label, non-randomised controlled study.

Vilar-Gomez E, Athinarayanan SJ, Adams RN, Hallberg SJ, Bhanpuri NH, McKenzie AL, Campbell WW, McCarter JP, Phinney SD, Volek JS, Chalasani N.

BMJ Open. 2019 Feb 25;9(2):e023597. doi: 10.1136/bmjopen-2018-023597.

3.

Improvement in patient-reported sleep in type 2 diabetes and prediabetes participants receiving a continuous care intervention with nutritional ketosis.

Siegmann MJ, Athinarayanan SJ, Hallberg SJ, McKenzie AL, Bhanpuri NH, Campbell WW, McCarter JP, Phinney SD, Volek JS, Van Dort CJ.

Sleep Med. 2019 Mar;55:92-99. doi: 10.1016/j.sleep.2018.12.014. Epub 2019 Jan 3.

4.

Cardiovascular disease risk factor responses to a type 2 diabetes care model including nutritional ketosis induced by sustained carbohydrate restriction at 1 year: an open label, non-randomized, controlled study.

Bhanpuri NH, Hallberg SJ, Williams PT, McKenzie AL, Ballard KD, Campbell WW, McCarter JP, Phinney SD, Volek JS.

Cardiovasc Diabetol. 2018 May 1;17(1):56. doi: 10.1186/s12933-018-0698-8.

5.

Author Correction: Effectiveness and Safety of a Novel Care Model for the Management of Type 2 Diabetes at 1 Year: An Open-Label, Non-Randomized, Controlled Study.

Hallberg SJ, McKenzie AL, Williams PT, Bhanpuri NH, Peters AL, Campbell WW, Hazbun TL, Volk BM, McCarter JP, Phinney SD, Volek JS.

Diabetes Ther. 2018 Apr;9(2):613-621. doi: 10.1007/s13300-018-0386-4.

6.

Effectiveness and Safety of a Novel Care Model for the Management of Type 2 Diabetes at 1 Year: An Open-Label, Non-Randomized, Controlled Study.

Hallberg SJ, McKenzie AL, Williams PT, Bhanpuri NH, Peters AL, Campbell WW, Hazbun TL, Volk BM, McCarter JP, Phinney SD, Volek JS.

Diabetes Ther. 2018 Apr;9(2):583-612. doi: 10.1007/s13300-018-0373-9. Epub 2018 Feb 7. Erratum in: Diabetes Ther. 2018 Mar 5;:.

7.

A Novel Intervention Including Individualized Nutritional Recommendations Reduces Hemoglobin A1c Level, Medication Use, and Weight in Type 2 Diabetes.

McKenzie AL, Hallberg SJ, Creighton BC, Volk BM, Link TM, Abner MK, Glon RM, McCarter JP, Volek JS, Phinney SD.

JMIR Diabetes. 2017 Mar 7;2(1):e5. doi: 10.2196/diabetes.6981.

8.

Thermodynamic evaluation of ligand binding in the plant-like phosphoethanolamine methyltransferases of the parasitic nematode Haemonchus contortus.

Lee SG, Haakenson W, McCarter JP, Williams DJ, Hresko MC, Jez JM.

J Biol Chem. 2011 Nov 4;286(44):38060-8. doi: 10.1074/jbc.M111.290619. Epub 2011 Sep 13.

9.

The draft genome of the parasitic nematode Trichinella spiralis.

Mitreva M, Jasmer DP, Zarlenga DS, Wang Z, Abubucker S, Martin J, Taylor CM, Yin Y, Fulton L, Minx P, Yang SP, Warren WC, Fulton RS, Bhonagiri V, Zhang X, Hallsworth-Pepin K, Clifton SW, McCarter JP, Appleton J, Mardis ER, Wilson RK.

Nat Genet. 2011 Mar;43(3):228-35. doi: 10.1038/ng.769. Epub 2011 Feb 20.

10.

The transcriptomes of the cattle parasitic nematode Ostertagia ostartagi.

Abubucker S, Zarlenga DS, Martin J, Yin Y, Wang Z, McCarter JP, Gasbarree L, Wilson RK, Mitreva M.

Vet Parasitol. 2009 May 26;162(1-2):89-99. doi: 10.1016/j.vetpar.2009.02.023. Epub 2009 Feb 27.

11.

Molecular determinants archetypical to the phylum Nematoda.

Yin Y, Martin J, Abubucker S, Wang Z, Wyrwicz L, Rychlewski L, McCarter JP, Wilson RK, Mitreva M.

BMC Genomics. 2009 Mar 18;10:114. doi: 10.1186/1471-2164-10-114.

12.

Sequence mining and transcript profiling to explore cyst nematode parasitism.

Elling AA, Mitreva M, Gai X, Martin J, Recknor J, Davis EL, Hussey RS, Nettleton D, McCarter JP, Baum TJ.

BMC Genomics. 2009 Jan 30;10:58. doi: 10.1186/1471-2164-10-58.

13.

NemaPath: online exploration of KEGG-based metabolic pathways for nematodes.

Wylie T, Martin J, Abubucker S, Yin Y, Messina D, Wang Z, McCarter JP, Mitreva M.

BMC Genomics. 2008 Nov 4;9:525. doi: 10.1186/1471-2164-9-525.

14.

Nematology: terra incognita no more.

McCarter JP.

Nat Biotechnol. 2008 Aug;26(8):882-4. doi: 10.1038/nbt0808-882. No abstract available.

PMID:
18688240
15.

Intestinal transcriptomes of nematodes: comparison of the parasites Ascaris suum and Haemonchus contortus with the free-living Caenorhabditis elegans.

Yin Y, Martin J, Abubucker S, Scott AL, McCarter JP, Wilson RK, Jasmer DP, Mitreva M.

PLoS Negl Trop Dis. 2008 Aug 6;2(8):e269. doi: 10.1371/journal.pntd.0000269.

16.

The canine hookworm genome: analysis and classification of Ancylostoma caninum survey sequences.

Abubucker S, Martin J, Yin Y, Fulton L, Yang SP, Hallsworth-Pepin K, Johnston JS, Hawdon J, McCarter JP, Wilson RK, Mitreva M.

Mol Biochem Parasitol. 2008 Feb;157(2):187-92. Epub 2007 Nov 9.

17.

Ivermectin resistance in Onchocerca volvulus: toward a genetic basis.

Lustigman S, McCarter JP.

PLoS Negl Trop Dis. 2007 Aug 30;1(1):e76. No abstract available.

18.

Divergent evolution of arrested development in the dauer stage of Caenorhabditis elegans and the infective stage of Heterodera glycines.

Elling AA, Mitreva M, Recknor J, Gai X, Martin J, Maier TR, McDermott JP, Hewezi T, McK Bird D, Davis EL, Hussey RS, Nettleton D, McCarter JP, Baum TJ.

Genome Biol. 2007;8(10):R211.

19.

Genomics and emerging drug discovery technologies.

Berriman M, Lustigman S, McCarter JP.

Expert Opin Drug Discov. 2007 Oct;2(s1):S83-9. doi: 10.1517/17460441.2.S1.S83.

PMID:
23489036
20.

Draft genome of the filarial nematode parasite Brugia malayi.

Ghedin E, Wang S, Spiro D, Caler E, Zhao Q, Crabtree J, Allen JE, Delcher AL, Guiliano DB, Miranda-Saavedra D, Angiuoli SV, Creasy T, Amedeo P, Haas B, El-Sayed NM, Wortman JR, Feldblyum T, Tallon L, Schatz M, Shumway M, Koo H, Salzberg SL, Schobel S, Pertea M, Pop M, White O, Barton GJ, Carlow CK, Crawford MJ, Daub J, Dimmic MW, Estes CF, Foster JM, Ganatra M, Gregory WF, Johnson NM, Jin J, Komuniecki R, Korf I, Kumar S, Laney S, Li BW, Li W, Lindblom TH, Lustigman S, Ma D, Maina CV, Martin DM, McCarter JP, McReynolds L, Mitreva M, Nutman TB, Parkinson J, Peregrín-Alvarez JM, Poole C, Ren Q, Saunders L, Sluder AE, Smith K, Stanke M, Unnasch TR, Ware J, Wei AD, Weil G, Williams DJ, Zhang Y, Williams SA, Fraser-Liggett C, Slatko B, Blaxter ML, Scott AL.

Science. 2007 Sep 21;317(5845):1756-60.

21.

Parasitic nematodes - from genomes to control.

Mitreva M, Zarlenga DS, McCarter JP, Jasmer DP.

Vet Parasitol. 2007 Aug 19;148(1):31-42. Epub 2007 Jun 7. Review.

PMID:
17560034
22.

Phosphoethanolamine N-methyltransferase (PMT-1) catalyses the first reaction of a new pathway for phosphocholine biosynthesis in Caenorhabditis elegans.

Brendza KM, Haakenson W, Cahoon RE, Hicks LM, Palavalli LH, Chiapelli BJ, McLaird M, McCarter JP, Williams DJ, Hresko MC, Jez JM.

Biochem J. 2007 Jun 15;404(3):439-48.

23.

Brugia malayi: effects of radiation and culture on gene expression in infective larvae.

Li BW, Rush AC, Weil GJ, McCarter JP, Mitreva M.

Mol Biochem Parasitol. 2006 Oct;149(2):201-7. Epub 2006 Jun 22.

PMID:
16824625
24.

Identification and analysis of genes expressed in the adult filarial parasitic nematode Dirofilaria immitis.

Yin Y, Martin J, McCarter JP, Clifton SW, Wilson RK, Mitreva M.

Int J Parasitol. 2006 Jun;36(7):829-39. Epub 2006 Mar 31.

PMID:
16697384
25.

Defining the role of phosphomethylethanolamine N-methyltransferase from Caenorhabditis elegans in phosphocholine biosynthesis by biochemical and kinetic analysis.

Palavalli LH, Brendza KM, Haakenson W, Cahoon RE, McLaird M, Hicks LM, McCarter JP, Williams DJ, Hresko MC, Jez JM.

Biochemistry. 2006 May 16;45(19):6056-65.

PMID:
16681378
26.

Codon usage patterns in Nematoda: analysis based on over 25 million codons in thirty-two species.

Mitreva M, Wendl MC, Martin J, Wylie T, Yin Y, Larson A, Parkinson J, Waterston RH, McCarter JP.

Genome Biol. 2006;7(8):R75.

27.

Detection of putative secreted proteins in the plant-parasitic nematode Heterodera schachtii.

Vanholme B, Mitreva M, Van Criekinge W, Logghe M, Bird D, McCarter JP, Gheysen G.

Parasitol Res. 2006 Apr;98(5):414-24. Epub 2005 Dec 28.

PMID:
16380840
28.

Nematode gene sequences: update for december 2005.

McCarter JP, Bird DM, Mitreva M.

J Nematol. 2005 Dec;37(4):417-21. No abstract available.

29.

A white paper on nematode comparative genomics.

Bird DM, Blaxter ML, McCarter JP, Mitreva M, Sternberg PW, Thomas WK.

J Nematol. 2005 Dec;37(4):408-16.

30.

Comparative genomics of nematodes.

Mitreva M, Blaxter ML, Bird DM, McCarter JP.

Trends Genet. 2005 Oct;21(10):573-81.

PMID:
16099532
31.

Expressed sequence tags from life cycle stages of Trichinella spiralis: application to biology and parasite control.

Mitreva M, Appleton J, McCarter JP, Jasmer DP.

Vet Parasitol. 2005 Sep 5;132(1-2):13-7. Review.

PMID:
15993542
32.

An expressed sequence tag analysis of the life-cycle of the parasitic nematode Strongyloides ratti.

Thompson FJ, Mitreva M, Barker GL, Martin J, Waterston RH, McCarter JP, Viney ME.

Mol Biochem Parasitol. 2005 Jul;142(1):32-46. Epub 2005 Apr 18. Erratum in: Mol Biochem Parasitol. 2005 Oct;143(2):250. Waterson, Robert H [corrected to Waterston, Robert H].

PMID:
15907559
33.

Investigating hookworm genomes by comparative analysis of two Ancylostoma species.

Mitreva M, McCarter JP, Arasu P, Hawdon J, Martin J, Dante M, Wylie T, Xu J, Stajich JE, Kapulkin W, Clifton SW, Waterston RH, Wilson RK.

BMC Genomics. 2005 Apr 26;6:58.

34.

RNAi-based discovery and validation of new drug targets in filarial nematodes.

Behm CA, Bendig MM, McCarter JP, Sluder AE.

Trends Parasitol. 2005 Mar;21(3):97-100. Review.

PMID:
15734653
35.

A transcriptomic analysis of the phylum Nematoda.

Parkinson J, Mitreva M, Whitton C, Thomson M, Daub J, Martin J, Schmid R, Hall N, Barrell B, Waterston RH, McCarter JP, Blaxter ML.

Nat Genet. 2004 Dec;36(12):1259-67. Epub 2004 Nov 14.

PMID:
15543149
37.

Gene discovery in the adenophorean nematode Trichinella spiralis: an analysis of transcription from three life cycle stages.

Mitreva M, Jasmer DP, Appleton J, Martin J, Dante M, Wylie T, Clifton SW, Waterston RH, McCarter JP.

Mol Biochem Parasitol. 2004 Oct;137(2):277-91.

PMID:
15383298
38.

Genomic filtering: an approach to discovering novel antiparasitics.

McCarter JP.

Trends Parasitol. 2004 Oct;20(10):462-8. Review.

PMID:
15363439
39.

A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans.

Mitreva M, Elling AA, Dante M, Kloek AP, Kalyanaraman A, Aluru S, Clifton SW, Bird DM, Baum TJ, McCarter JP.

Mol Genet Genomics. 2004 Sep;272(2):138-48. Epub 2004 Aug 28.

PMID:
15338281
40.

Comparative genomics of gene expression in the parasitic and free-living nematodes Strongyloides stercoralis and Caenorhabditis elegans.

Mitreva M, McCarter JP, Martin J, Dante M, Wylie T, Chiapelli B, Pape D, Clifton SW, Nutman TB, Waterston RH.

Genome Res. 2004 Feb;14(2):209-20.

41.

Nematode.net: a tool for navigating sequences from parasitic and free-living nematodes.

Wylie T, Martin JC, Dante M, Mitreva MD, Clifton SW, Chinwalla A, Waterston RH, Wilson RK, McCarter JP.

Nucleic Acids Res. 2004 Jan 1;32(Database issue):D423-6.

42.

Nematode gene sequences: update for december 2003.

McCarter JP, Mitreva M, Clifton SW, Bird DM, Waterston RH.

J Nematol. 2003 Dec;35(4):465-9. No abstract available.

43.

400000 nematode ESTs on the Net.

Parkinson J, Mitreva M, Hall N, Blaxter M, McCarter JP.

Trends Parasitol. 2003 Jul;19(7):283-6.

PMID:
12855373
44.

Horizontally transferred genes in plant-parasitic nematodes: a high-throughput genomic approach.

Scholl EH, Thorne JL, McCarter JP, Bird DM.

Genome Biol. 2003;4(6):R39. Epub 2003 May 19.

45.

Analysis and functional classification of transcripts from the nematode Meloidogyne incognita.

McCarter JP, Mitreva MD, Martin J, Dante M, Wylie T, Rao U, Pape D, Bowers Y, Theising B, Murphy CV, Kloek AP, Chiapelli BJ, Clifton SW, Bird DM, Waterston RH.

Genome Biol. 2003;4(4):R26. Epub 2003 Mar 31.

46.

Nematode gene sequences, update for june 2002.

McCarter JP, Clifton SW, Bird DM, Waterson RH.

J Nematol. 2002 Jun;34(2):71-4. No abstract available.

47.

Nematode gene sequences, december 2000 update.

McCarter JP, Bird DM, Clifton SW, Waterston RH.

J Nematol. 2000 Dec;32(4):331-3. No abstract available.

48.

Caenorhabditis globin genes: rapid intronic divergence contrasts with conservation of silent exonic sites.

Kloek AP, McCarter JP, Setterquist RA, Schedl T, Goldberg DE.

J Mol Evol. 1996 Aug;43(2):101-8.

PMID:
8660434

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