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Magnetic Resonance-only Workflow: Implementation in a UK Centre.

Pearson RA, Brooks R, Driver S, Frew JA, Pedley ID, Pilling K, Richmond N, Walker C, West S, Wilkinson M, Wyatt J, McCallum H.

Clin Oncol (R Coll Radiol). 2019 Nov 27. pii: S0936-6555(19)30482-0. doi: 10.1016/j.clon.2019.10.009. [Epub ahead of print] No abstract available.


Conserving adaptive potential: lessons from Tasmanian devils and their transmissible cancer.

Hohenlohe PA, McCallum HI, Jones ME, Lawrance MF, Hamede RK, Storfer A.

Conserv Genet. 2019 Feb;20(1):81-87. doi: 10.1007/s10592-019-01157-5. Epub 2019 Feb 14.


Tracing the rise of malignant cell lines: Distribution, epidemiology and evolutionary interactions of two transmissible cancers in Tasmanian devils.

James S, Jennings G, Kwon YM, Stammnitz M, Fraik A, Storfer A, Comte S, Pemberton D, Fox S, Brown B, Pye R, Woods G, Lyons B, Hohenlohe PA, McCallum H, Siddle H, Thomas F, Ujvari B, Murchison EP, Jones M, Hamede R.

Evol Appl. 2019 Jun 28;12(9):1772-1780. doi: 10.1111/eva.12831. eCollection 2019 Oct.


Synchronous shedding of multiple bat paramyxoviruses coincides with peak periods of Hendra virus spillover.

Peel AJ, Wells K, Giles J, Boyd V, Burroughs A, Edson D, Crameri G, Baker ML, Field H, Wang LF, McCallum H, Plowright RK, Clark N.

Emerg Microbes Infect. 2019;8(1):1314-1323. doi: 10.1080/22221751.2019.1661217.


Contemporary Demographic Reconstruction Methods Are Robust to Genome Assembly Quality: A Case Study in Tasmanian Devils.

Patton AH, Margres MJ, Stahlke AR, Hendricks S, Lewallen K, Hamede RK, Ruiz-Aravena M, Ryder O, McCallum HI, Jones ME, Hohenlohe PA, Storfer A.

Mol Biol Evol. 2019 Dec 1;36(12):2906-2921. doi: 10.1093/molbev/msz191.


Sampling to elucidate the dynamics of infections in reservoir hosts.

Plowright RK, Becker DJ, McCallum H, Manlove KR.

Philos Trans R Soc Lond B Biol Sci. 2019 Sep 30;374(1782):20180336. doi: 10.1098/rstb.2018.0336. Epub 2019 Aug 12.


Dose-response and transmission: the nexus between reservoir hosts, environment and recipient hosts.

Lunn TJ, Restif O, Peel AJ, Munster VJ, de Wit E, Sokolow S, van Doremalen N, Hudson P, McCallum H.

Philos Trans R Soc Lond B Biol Sci. 2019 Sep 30;374(1782):20190016. doi: 10.1098/rstb.2019.0016. Epub 2019 Aug 12.


Ecological interventions to prevent and manage zoonotic pathogen spillover.

Sokolow SH, Nova N, Pepin KM, Peel AJ, Pulliam JRC, Manlove K, Cross PC, Becker DJ, Plowright RK, McCallum H, De Leo GA.

Philos Trans R Soc Lond B Biol Sci. 2019 Sep 30;374(1782):20180342. doi: 10.1098/rstb.2018.0342. Epub 2019 Aug 12.


IPEM Topical Report: A 2018 IPEM survey of MRI use for external beam radiotherapy treatment planning in the UK.

Speight R, Schmidt MA, Liney GP, Johnstone RI, Eccles CL, Dubec M, George B, Henry A, McCallum H.

Phys Med Biol. 2019 Sep 5;64(17):175021. doi: 10.1088/1361-6560/ab2c7c.


Interpreting mosquito feeding patterns in Australia through an ecological lens: an analysis of blood meal studies.

Stephenson EB, Murphy AK, Jansen CC, Peel AJ, McCallum H.

Parasit Vectors. 2019 Apr 4;12(1):156. doi: 10.1186/s13071-019-3405-z.


Applying a commercial atlas-based synthetic Computed Tomography algorithm to patients with hip prostheses for prostate Magnetic Resonance-only radiotherapy.

Wyatt J, McCallum H.

Radiother Oncol. 2019 Apr;133:100-105. doi: 10.1016/j.radonc.2018.12.029. Epub 2019 Jan 22.


Individual and temporal variation in pathogen load predicts long-term impacts of an emerging infectious disease.

Wells K, Hamede RK, Jones ME, Hohenlohe PA, Storfer A, McCallum HI.

Ecology. 2019 Mar;100(3):e02613. doi: 10.1002/ecy.2613. Epub 2019 Feb 15.


Review of the Amphibian Immune Response to Chytridiomycosis, and Future Directions.

Grogan LF, Robert J, Berger L, Skerratt LF, Scheele BC, Castley JG, Newell DA, McCallum HI.

Front Immunol. 2018 Nov 9;9:2536. doi: 10.3389/fimmu.2018.02536. eCollection 2018. Review.


The Genomic Basis of Tumor Regression in Tasmanian Devils (Sarcophilus harrisii).

Margres MJ, Ruiz-Aravena M, Hamede R, Jones ME, Lawrance MF, Hendricks SA, Patton A, Davis BW, Ostrander EA, McCallum H, Hohenlohe PA, Storfer A.

Genome Biol Evol. 2018 Nov 1;10(11):3012-3025. doi: 10.1093/gbe/evy229.


Large-effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer.

Margres MJ, Jones ME, Epstein B, Kerlin DH, Comte S, Fox S, Fraik AK, Hendricks SA, Huxtable S, Lachish S, Lazenby B, O'Rourke SM, Stahlke AR, Wiench CG, Hamede R, Schönfeld B, McCallum H, Miller MR, Hohenlohe PA, Storfer A.

Mol Ecol. 2018 Nov;27(21):4189-4199. doi: 10.1111/mec.14853. Epub 2018 Oct 5.


The devil is in the details: Genomics of transmissible cancers in Tasmanian devils.

Storfer A, Hohenlohe PA, Margres MJ, Patton A, Fraik AK, Lawrance M, Ricci LE, Stahlke AR, McCallum HI, Jones ME.

PLoS Pathog. 2018 Aug 2;14(8):e1007098. doi: 10.1371/journal.ppat.1007098. eCollection 2018 Aug. No abstract available.


Environmental drivers of spatiotemporal foraging intensity in fruit bats and implications for Hendra virus ecology.

Giles JR, Eby P, Parry H, Peel AJ, Plowright RK, Westcott DA, McCallum H.

Sci Rep. 2018 Jun 22;8(1):9555. doi: 10.1038/s41598-018-27859-3.


The non-human reservoirs of Ross River virus: a systematic review of the evidence.

Stephenson EB, Peel AJ, Reid SA, Jansen CC, McCallum H.

Parasit Vectors. 2018 Mar 19;11(1):188. doi: 10.1186/s13071-018-2733-8. Review.


Pathogen spillover during land conversion.

Faust CL, McCallum HI, Bloomfield LSP, Gottdenker NL, Gillespie TR, Torney CJ, Dobson AP, Plowright RK.

Ecol Lett. 2018 Apr;21(4):471-483. doi: 10.1111/ele.12904. Epub 2018 Feb 21.


Global spread of helminth parasites at the human-domestic animal-wildlife interface.

Wells K, Gibson DI, Clark NJ, Ribas A, Morand S, McCallum HI.

Glob Chang Biol. 2018 Jul;24(7):3254-3265. doi: 10.1111/gcb.14064. Epub 2018 Feb 13.


Systematic Review of Synthetic Computed Tomography Generation Methodologies for Use in Magnetic Resonance Imaging-Only Radiation Therapy.

Johnstone E, Wyatt JJ, Henry AM, Short SC, Sebag-Montefiore D, Murray L, Kelly CG, McCallum HM, Speight R.

Int J Radiat Oncol Biol Phys. 2018 Jan 1;100(1):199-217. doi: 10.1016/j.ijrobp.2017.08.043. Epub 2017 Sep 8. Review.


UK quantitative WB-DWI technical workgroup: consensus meeting recommendations on optimisation, quality control, processing and analysis of quantitative whole-body diffusion-weighted imaging for cancer.

Barnes A, Alonzi R, Blackledge M, Charles-Edwards G, Collins DJ, Cook G, Coutts G, Goh V, Graves M, Kelly C, Koh DM, McCallum H, Miquel ME, O'Connor J, Padhani A, Pearson R, Priest A, Rockall A, Stirling J, Taylor S, Tunariu N, van der Meulen J, Walls D, Winfield J, Punwani S.

Br J Radiol. 2018 Jan;91(1081):20170577. doi: 10.1259/bjr.20170577. Epub 2017 Dec 7.


Investigating the generalisation of an atlas-based synthetic-CT algorithm to another centre and MR scanner for prostate MR-only radiotherapy.

Wyatt JJ, Dowling JA, Kelly CG, McKenna J, Johnstone E, Speight R, Henry A, Greer PB, McCallum HM.

Phys Med Biol. 2017 Nov 21;62(24):N548-N560. doi: 10.1088/1361-6560/aa9676.


Conditions affecting the timing and magnitude of Hendra virus shedding across pteropodid bat populations in Australia.

Páez DJ, Giles J, McCallum H, Field H, Jordan D, Peel AJ, Plowright RK.

Epidemiol Infect. 2017 Nov;145(15):3143-3153. doi: 10.1017/S0950268817002138. Epub 2017 Sep 25.


Pathways to zoonotic spillover.

Plowright RK, Parrish CR, McCallum H, Hudson PJ, Ko AI, Graham AL, Lloyd-Smith JO.

Nat Rev Microbiol. 2017 Aug;15(8):502-510. doi: 10.1038/nrmicro.2017.45. Epub 2017 May 30. Review.


Persistent infections support maintenance of a coronavirus in a population of Australian bats (Myotis macropus).

Jeong J, Smith CS, Peel AJ, Plowright RK, Kerlin DH, McBroom J, McCallum H.

Epidemiol Infect. 2017 Jul;145(10):2053-2061. doi: 10.1017/S0950268817000991. Epub 2017 May 22.


Infection of the fittest: devil facial tumour disease has greatest effect on individuals with highest reproductive output.

Wells K, Hamede RK, Kerlin DH, Storfer A, Hohenlohe PA, Jones ME, McCallum HI.

Ecol Lett. 2017 Jun;20(6):770-778. doi: 10.1111/ele.12776. Epub 2017 May 10.


Null expectations for disease dynamics in shrinking habitat: dilution or amplification?

Faust CL, Dobson AP, Gottdenker N, Bloomfield LSP, McCallum HI, Gillespie TR, Diuk-Wasser M, Plowright RK.

Philos Trans R Soc Lond B Biol Sci. 2017 Jun 5;372(1722). pii: 20160173. doi: 10.1098/rstb.2016.0173.


What is a vector?

Wilson AJ, Morgan ER, Booth M, Norman R, Perkins SE, Hauffe HC, Mideo N, Antonovics J, McCallum H, Fenton A.

Philos Trans R Soc Lond B Biol Sci. 2017 May 5;372(1719). pii: 20160085. doi: 10.1098/rstb.2016.0085. Review.


Breaking beta: deconstructing the parasite transmission function.

McCallum H, Fenton A, Hudson PJ, Lee B, Levick B, Norman R, Perkins SE, Viney M, Wilson AJ, Lello J.

Philos Trans R Soc Lond B Biol Sci. 2017 May 5;372(1719). pii: 20160084. doi: 10.1098/rstb.2016.0084.


Integral Projection Models for host-parasite systems with an application to amphibian chytrid fungus.

Wilber MQ, Langwig KE, Kilpatrick AM, McCallum HI, Briggs CJ.

Methods Ecol Evol. 2016 Oct;7(10):1182-1194. doi: 10.1111/2041-210X.12561. Epub 2016 Apr 28.


Models of Eucalypt phenology predict bat population flux.

Giles JR, Plowright RK, Eby P, Peel AJ, McCallum H.

Ecol Evol. 2016 Sep 21;6(20):7230-7245. eCollection 2016 Oct.


Widespread white matter and conduction defects in PSEN1-related spastic paraparesis.

Soosman SK, Joseph-Mathurin N, Braskie MN, Bordelon YM, Wharton D, Casado M, Coppola G, McCallum H, Nuwer M, Coutin-Churchman P, Apostolova LG, Benzinger T, Ringman JM.

Neurobiol Aging. 2016 Nov;47:201-209. doi: 10.1016/j.neurobiolaging.2016.07.030. Epub 2016 Aug 8.


Rapid evolutionary response to a transmissible cancer in Tasmanian devils.

Epstein B, Jones M, Hamede R, Hendricks S, McCallum H, Murchison EP, Schönfeld B, Wiench C, Hohenlohe P, Storfer A.

Nat Commun. 2016 Aug 30;7:12684. doi: 10.1038/ncomms12684.


Transmission or Within-Host Dynamics Driving Pulses of Zoonotic Viruses in Reservoir-Host Populations.

Plowright RK, Peel AJ, Streicker DG, Gilbert AT, McCallum H, Wood J, Baker ML, Restif O.

PLoS Negl Trop Dis. 2016 Aug 4;10(8):e0004796. doi: 10.1371/journal.pntd.0004796. eCollection 2016 Aug. Review.


Disease-induced decline of an apex predator drives invasive dominated states and threatens biodiversity.

Hollings T, Jones M, Mooney N, McCallum H.

Ecology. 2016 Feb;97(2):394-405.


Models for managing wildlife disease.


Parasitology. 2016 Jun;143(7):805-20. doi: 10.1017/S0031182015000980. Epub 2015 Aug 18. Review.


Lose biodiversity, gain disease.

McCallum HI.

Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8523-4. doi: 10.1073/pnas.1510607112. Epub 2015 Jun 29. No abstract available.


Correlates of Recent Declines of Rodents in Northern and Southern Australia: Habitat Structure Is Critical.

Lawes MJ, Fisher DO, Johnson CN, Blomberg SP, Frank AS, Fritz SA, McCallum H, VanDerWal J, Abbott BN, Legge S, Letnic M, Thomas CR, Thurgate N, Fisher A, Gordon IJ, Kutt A.

PLoS One. 2015 Jun 25;10(6):e0130626. doi: 10.1371/journal.pone.0130626. eCollection 2015.


Relaxation of risk-sensitive behaviour of prey following disease-induced decline of an apex predator, the Tasmanian devil.

Hollings T, McCallum H, Kreger K, Mooney N, Jones M.

Proc Biol Sci. 2015 Jul 7;282(1810). pii: 20150124. doi: 10.1098/rspb.2015.0124.


Ecological dynamics of emerging bat virus spillover.

Plowright RK, Eby P, Hudson PJ, Smith IL, Westcott D, Bryden WL, Middleton D, Reid PA, McFarlane RA, Martin G, Tabor GM, Skerratt LF, Anderson DL, Crameri G, Quammen D, Jordan D, Freeman P, Wang LF, Epstein JH, Marsh GA, Kung NY, McCallum H.

Proc Biol Sci. 2015 Jan 7;282(1798):20142124. doi: 10.1098/rspb.2014.2124. Review.


Moving Beyond Too Little, Too Late: Managing Emerging Infectious Diseases in Wild Populations Requires International Policy and Partnerships.

Voyles J, Kilpatrick AM, Collins JP, Fisher MC, Frick WF, McCallum H, Willis CK, Blehert DS, Murray KA, Puschendorf R, Rosenblum EB, Bolker BM, Cheng TL, Langwig KE, Lindner DL, Toothman M, Wilber MQ, Briggs CJ.

Ecohealth. 2015 Sep;12(3):404-7. doi: 10.1007/s10393-014-0980-5. Epub 2014 Oct 7. No abstract available.


Over-wintering tadpoles of Mixophyes fasciolatus act as reservoir host for Batrachochytrium dendrobatidis.

Narayan EJ, Graham C, McCallum H, Hero JM.

PLoS One. 2014 Mar 19;9(3):e92499. doi: 10.1371/journal.pone.0092499. eCollection 2014.


Wildlife disease ecology in changing landscapes: Mesopredator release and toxoplasmosis.

Hollings T, Jones M, Mooney N, McCallum H.

Int J Parasitol Parasites Wildl. 2013 Mar 5;2:110-8. doi: 10.1016/j.ijppaw.2013.02.002. eCollection 2013 Dec.


Students in the perioperative learning environment and emotional support.

McCallum H.

J Perioper Pract. 2013 Jul-Aug;23(7-8):158-62.


Ex vivo restimulation of human PBMC expands a CD3+CD4-CD8- γδ+ T cell population that can confound the evaluation of CD4 and CD8 T cell responses to vaccination.

Sedgmen BJ, Papalia L, Wang L, Dyson AR, McCallum HA, Simson CM, Pearse MJ, Maraskovsky E, Hung D, Eomois PP, Hartel G, Barnden MJ, Rockman SP.

Clin Dev Immunol. 2013;2013:186420. doi: 10.1155/2013/186420. Epub 2013 Aug 26.


Trophic cascades following the disease-induced decline of an apex predator, the Tasmanian devil.

Hollings T, Jones M, Mooney N, McCallum H.

Conserv Biol. 2014 Feb;28(1):63-75. doi: 10.1111/cobi.12152. Epub 2013 Sep 11.


Non-invasive monitoring of glucocorticoid physiology within highland and lowland populations of native Australian Great Barred Frog (Mixophyes fasciolatus).

Graham CM, Narayan EJ, McCallum H, Hero JM.

Gen Comp Endocrinol. 2013 Sep 15;191:24-30. doi: 10.1016/j.ygcen.2013.05.012. Epub 2013 May 30.


Variability in prostate and seminal vesicle delineations defined on magnetic resonance images, a multi-observer, -center and -sequence study.

Nyholm T, Jonsson J, Söderström K, Bergström P, Carlberg A, Frykholm G, Behrens CF, Geertsen PF, Trepiakas R, Hanvey S, Sadozye A, Ansari J, McCallum H, Frew J, McMenemin R, Zackrisson B.

Radiat Oncol. 2013 May 24;8:126. doi: 10.1186/1748-717X-8-126.


Whether the weather drives patterns of endemic amphibian chytridiomycosis: a pathogen proliferation approach.

Murray KA, Skerratt LF, Garland S, Kriticos D, McCallum H.

PLoS One. 2013 Apr 17;8(4):e61061. doi: 10.1371/journal.pone.0061061. Print 2013.

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