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Items: 1 to 50 of 81

1.

Recent Changes in the Scaffold Diversity of Organic Chemistry As Seen in the CAS Registry.

Lipkus AH, Watkins SP, Gengras K, McBride MJ, Wills TJ.

J Org Chem. 2019 Nov 1;84(21):13948-13956. doi: 10.1021/acs.joc.9b02111. Epub 2019 Oct 23.

PMID:
31603683
2.

The Carboxy-Terminal Region of Flavobacterium johnsoniae SprB Facilitates Its Secretion by the Type IX Secretion System and Propulsion by the Gliding Motility Machinery.

Kulkarni SS, Johnston JJ, Zhu Y, Hying ZT, McBride MJ.

J Bacteriol. 2019 Sep 6;201(19). pii: e00218-19. doi: 10.1128/JB.00218-19. Print 2019 Oct 1.

PMID:
31262839
3.

Biochemical and Structural Characterization of XoxG and XoxJ and Their Roles in Lanthanide-Dependent Methanol Dehydrogenase Activity.

Featherston ER, Rose HR, McBride MJ, Taylor EM, Boal AK, Cotruvo JA Jr.

Chembiochem. 2019 Sep 16;20(18):2360-2372. doi: 10.1002/cbic.201900184. Epub 2019 Aug 7.

PMID:
31017712
4.

Structures of Class Id Ribonucleotide Reductase Catalytic Subunits Reveal a Minimal Architecture for Deoxynucleotide Biosynthesis.

Rose HR, Maggiolo AO, McBride MJ, Palowitch GM, Pandelia ME, Davis KM, Yennawar NH, Boal AK.

Biochemistry. 2019 Apr 9;58(14):1845-1860. doi: 10.1021/acs.biochem.8b01252. Epub 2019 Mar 22.

PMID:
30855138
5.

Bacteroidetes Gliding Motility and the Type IX Secretion System.

McBride MJ.

Microbiol Spectr. 2019 Jan;7(1). doi: 10.1128/microbiolspec.PSIB-0002-2018.

PMID:
30767845
6.

A non-canonical SWI/SNF complex is a synthetic lethal target in cancers driven by BAF complex perturbation.

Michel BC, D'Avino AR, Cassel SH, Mashtalir N, McKenzie ZM, McBride MJ, Valencia AM, Zhou Q, Bocker M, Soares LMM, Pan J, Remillard DI, Lareau CA, Zullow HJ, Fortoul N, Gray NS, Bradner JE, Chan HM, Kadoch C.

Nat Cell Biol. 2018 Dec;20(12):1410-1420. doi: 10.1038/s41556-018-0221-1. Epub 2018 Nov 5.

7.

Binding of TMPRSS2-ERG to BAF Chromatin Remodeling Complexes Mediates Prostate Oncogenesis.

Sandoval GJ, Pulice JL, Pakula H, Schenone M, Takeda DY, Pop M, Boulay G, Williamson KE, McBride MJ, Pan J, St Pierre R, Hartman E, Garraway LA, Carr SA, Rivera MN, Li Z, Ronco L, Hahn WC, Kadoch C.

Mol Cell. 2018 Aug 16;71(4):554-566.e7. doi: 10.1016/j.molcel.2018.06.040. Epub 2018 Aug 2.

8.

The SS18-SSX Fusion Oncoprotein Hijacks BAF Complex Targeting and Function to Drive Synovial Sarcoma.

McBride MJ, Pulice JL, Beird HC, Ingram DR, D'Avino AR, Shern JF, Charville GW, Hornick JL, Nakayama RT, Garcia-Rivera EM, Araujo DM, Wang WL, Tsai JW, Yeagley M, Wagner AJ, Futreal PA, Khan J, Lazar AJ, Kadoch C.

Cancer Cell. 2018 Jun 11;33(6):1128-1141.e7. doi: 10.1016/j.ccell.2018.05.002. Epub 2018 May 31.

9.

Draft Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain MS-FC-4.

Bartelme RP, Barbier P, Lipscomb RS, LaPatra SE, Newton RJ, Evenhuis JP, McBride MJ.

Genome Announc. 2018 May 17;6(20). pii: e00429-18. doi: 10.1128/genomeA.00429-18.

10.

Disruption of mammalian SWI/SNF and polycomb complexes in human sarcomas: mechanisms and therapeutic opportunities.

McBride MJ, Kadoch C.

J Pathol. 2018 Apr;244(5):638-649. doi: 10.1002/path.5042. Epub 2018 Mar 6. Review.

11.

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria.

Ficko-Blean E, Préchoux A, Thomas F, Rochat T, Larocque R, Zhu Y, Stam M, Génicot S, Jam M, Calteau A, Viart B, Ropartz D, Pérez-Pascual D, Correc G, Matard-Mann M, Stubbs KA, Rogniaux H, Jeudy A, Barbeyron T, Médigue C, Czjzek M, Vallenet D, McBride MJ, Duchaud E, Michel G.

Nat Commun. 2017 Nov 22;8(1):1685. doi: 10.1038/s41467-017-01832-6.

12.

Untangling Flavobacterium johnsoniae Gliding Motility and Protein Secretion.

Johnston JJ, Shrivastava A, McBride MJ.

J Bacteriol. 2017 Dec 20;200(2). pii: e00362-17. doi: 10.1128/JB.00362-17. Print 2018 Jan 15.

13.

SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters.

Nakayama RT, Pulice JL, Valencia AM, McBride MJ, McKenzie ZM, Gillespie MA, Ku WL, Teng M, Cui K, Williams RT, Cassel SH, Qing H, Widmer CJ, Demetri GD, Irizarry RA, Zhao K, Ranish JA, Kadoch C.

Nat Genet. 2017 Nov;49(11):1613-1623. doi: 10.1038/ng.3958. Epub 2017 Sep 25.

14.

The Type IX Secretion System Is Required for Virulence of the Fish Pathogen Flavobacterium columnare.

Li N, Zhu Y, LaFrentz BR, Evenhuis JP, Hunnicutt DW, Conrad RA, Barbier P, Gullstrand CW, Roets JE, Powers JL, Kulkarni SS, Erbes DH, García JC, Nie P, McBride MJ.

Appl Environ Microbiol. 2017 Nov 16;83(23). pii: e01769-17. doi: 10.1128/AEM.01769-17. Print 2017 Dec 1.

15.

The unusual cellulose utilization system of the aerobic soil bacterium Cytophaga hutchinsonii.

Zhu Y, McBride MJ.

Appl Microbiol Biotechnol. 2017 Oct;101(19):7113-7127. doi: 10.1007/s00253-017-8467-2. Epub 2017 Aug 29. Review.

PMID:
28849247
16.

Cancer-Specific Retargeting of BAF Complexes by a Prion-like Domain.

Boulay G, Sandoval GJ, Riggi N, Iyer S, Buisson R, Naigles B, Awad ME, Rengarajan S, Volorio A, McBride MJ, Broye LC, Zou L, Stamenkovic I, Kadoch C, Rivera MN.

Cell. 2017 Sep 21;171(1):163-178.e19. doi: 10.1016/j.cell.2017.07.036. Epub 2017 Aug 24.

17.

The NLRP3 inflammasome contributes to sarcopenia and lower muscle glycolytic potential in old mice.

McBride MJ, Foley KP, D'Souza DM, Li YE, Lau TC, Hawke TJ, Schertzer JD.

Am J Physiol Endocrinol Metab. 2017 Aug 1;313(2):E222-E232. doi: 10.1152/ajpendo.00060.2017. Epub 2017 May 23.

18.

Diverse C-Terminal Sequences Involved in Flavobacterium johnsoniae Protein Secretion.

Kulkarni SS, Zhu Y, Brendel CJ, McBride MJ.

J Bacteriol. 2017 May 25;199(12). pii: e00884-16. doi: 10.1128/JB.00884-16. Print 2017 Jun 15.

19.

Genetic analyses unravel the crucial role of a horizontally acquired alginate lyase for brown algal biomass degradation by Zobellia galactanivorans.

Zhu Y, Thomas F, Larocque R, Li N, Duffieux D, Cladière L, Souchaud F, Michel G, McBride MJ.

Environ Microbiol. 2017 Jun;19(6):2164-2181. doi: 10.1111/1462-2920.13699. Epub 2017 Mar 21.

PMID:
28205313
20.

A polysaccharide utilization locus from Flavobacterium johnsoniae enables conversion of recalcitrant chitin.

Larsbrink J, Zhu Y, Kharade SS, Kwiatkowski KJ, Eijsink VG, Koropatkin NM, McBride MJ, Pope PB.

Biotechnol Biofuels. 2016 Nov 28;9:260. eCollection 2016.

21.

Complete Genome Sequence of the Fish Pathogen Flavobacterium columnare Strain C#2.

Bartelme RP, Newton RJ, Zhu Y, Li N, LaFrentz BR, McBride MJ.

Genome Announc. 2016 Jun 23;4(3). pii: e00624-16. doi: 10.1128/genomeA.00624-16.

22.

Periplasmic Cytophaga hutchinsonii Endoglucanases Are Required for Use of Crystalline Cellulose as the Sole Source of Carbon and Energy.

Zhu Y, Han L, Hefferon KL, Silvaggi NR, Wilson DB, McBride MJ.

Appl Environ Microbiol. 2016 Jul 15;82(15):4835-4845. doi: 10.1128/AEM.01298-16. Print 2016 Aug 1.

23.

Comparative Analysis of Cellulophaga algicola and Flavobacterium johnsoniae Gliding Motility.

Zhu Y, McBride MJ.

J Bacteriol. 2016 May 27;198(12):1743-1754. doi: 10.1128/JB.01020-15. Print 2016 Jun 15.

24.

Flavobacterium gliding motility and the type IX secretion system.

McBride MJ, Nakane D.

Curr Opin Microbiol. 2015 Dec;28:72-7. doi: 10.1016/j.mib.2015.07.016. Epub 2015 Oct 23. Review.

PMID:
26461123
25.

Deposition, exhumation, and paleoclimate of an ancient lake deposit, Gale crater, Mars.

Grotzinger JP, Gupta S, Malin MC, Rubin DM, Schieber J, Siebach K, Sumner DY, Stack KM, Vasavada AR, Arvidson RE, Calef F 3rd, Edgar L, Fischer WF, Grant JA, Griffes J, Kah LC, Lamb MP, Lewis KW, Mangold N, Minitti ME, Palucis M, Rice M, Williams RM, Yingst RA, Blake D, Blaney D, Conrad P, Crisp J, Dietrich WE, Dromart G, Edgett KS, Ewing RC, Gellert R, Hurowitz JA, Kocurek G, Mahaffy P, McBride MJ, McLennan SM, Mischna M, Ming D, Milliken R, Newsom H, Oehler D, Parker TJ, Vaniman D, Wiens RC, Wilson SA.

Science. 2015 Oct 9;350(6257):aac7575. doi: 10.1126/science.aac7575.

26.

Gene deletion strategy to examine the involvement of the two chondroitin lyases in Flavobacterium columnare virulence.

Li N, Qin T, Zhang XL, Huang B, Liu ZX, Xie HX, Zhang J, McBride MJ, Nie P.

Appl Environ Microbiol. 2015 Nov;81(21):7394-402. doi: 10.1128/AEM.01586-15. Epub 2015 Aug 7.

27.

Outer membrane proteins related to SusC and SusD are not required for Cytophaga hutchinsonii cellulose utilization.

Zhu Y, Kwiatkowski KJ, Yang T, Kharade SS, Bahr CM, Koropatkin NM, Liu W, McBride MJ.

Appl Microbiol Biotechnol. 2015 Aug;99(15):6339-50. doi: 10.1007/s00253-015-6555-8. Epub 2015 Apr 7.

PMID:
25846333
28.

Determination of Abraham model solute descriptors for the monomeric and dimeric forms of trans-cinnamic acid using measured solubilities from the Open Notebook Science Challenge.

Bradley JC, Abraham MH, Acree WE Jr, Lang AS, Beck SN, Bulger DA, Clark EA, Condron LN, Costa ST, Curtin EM, Kurtu SB, Mangir MI, McBride MJ.

Chem Cent J. 2015 Mar 22;9:11. doi: 10.1186/s13065-015-0080-9. eCollection 2015.

29.

Flavobacterium johnsoniae PorV is required for secretion of a subset of proteins targeted to the type IX secretion system.

Kharade SS, McBride MJ.

J Bacteriol. 2015 Jan 1;197(1):147-58. doi: 10.1128/JB.02085-14. Epub 2014 Oct 20.

30.

Bacteria that glide with helical tracks.

Nan B, McBride MJ, Chen J, Zusman DR, Oster G.

Curr Biol. 2014 Feb 17;24(4):R169-73. doi: 10.1016/j.cub.2013.12.034. Review.

31.

Flavobacterium johnsoniae chitinase ChiA is required for chitin utilization and is secreted by the type IX secretion system.

Kharade SS, McBride MJ.

J Bacteriol. 2014 Mar;196(5):961-70. doi: 10.1128/JB.01170-13. Epub 2013 Dec 20.

32.

Deletion of the Cytophaga hutchinsonii type IX secretion system gene sprP results in defects in gliding motility and cellulose utilization.

Zhu Y, McBride MJ.

Appl Microbiol Biotechnol. 2014 Jan;98(2):763-75. doi: 10.1007/s00253-013-5355-2. Epub 2013 Nov 21.

PMID:
24257839
33.

Helical flow of surface protein required for bacterial gliding motility.

Nakane D, Sato K, Wada H, McBride MJ, Nakayama K.

Proc Natl Acad Sci U S A. 2013 Jul 2;110(27):11145-50. doi: 10.1073/pnas.1219753110. Epub 2013 Jun 18.

34.

Flavobacterium johnsoniae GldK, GldL, GldM, and SprA are required for secretion of the cell surface gliding motility adhesins SprB and RemA.

Shrivastava A, Johnston JJ, van Baaren JM, McBride MJ.

J Bacteriol. 2013 Jul;195(14):3201-12. doi: 10.1128/JB.00333-13. Epub 2013 May 10.

35.

Gliding motility and Por secretion system genes are widespread among members of the phylum bacteroidetes.

McBride MJ, Zhu Y.

J Bacteriol. 2013 Jan;195(2):270-8. doi: 10.1128/JB.01962-12. Epub 2012 Nov 2.

36.

Flavobacterium johnsoniae RemA is a mobile cell surface lectin involved in gliding.

Shrivastava A, Rhodes RG, Pochiraju S, Nakane D, McBride MJ.

J Bacteriol. 2012 Jul;194(14):3678-88. doi: 10.1128/JB.00588-12. Epub 2012 May 11.

37.

Mutations in Flavobacterium johnsoniae sprE result in defects in gliding motility and protein secretion.

Rhodes RG, Samarasam MN, Van Groll EJ, McBride MJ.

J Bacteriol. 2011 Oct;193(19):5322-7. doi: 10.1128/JB.05480-11. Epub 2011 Jul 22.

38.

Development and use of a gene deletion strategy for Flavobacterium johnsoniae to identify the redundant gliding motility genes remF, remG, remH, and remI.

Rhodes RG, Pucker HG, McBride MJ.

J Bacteriol. 2011 May;193(10):2418-28. doi: 10.1128/JB.00117-11. Epub 2011 Mar 18.

39.

Flavobacterium johnsoniae sprB is part of an operon spanning the additional gliding motility genes sprC, sprD, and sprF.

Rhodes RG, Nelson SS, Pochiraju S, McBride MJ.

J Bacteriol. 2011 Feb;193(3):599-610. doi: 10.1128/JB.01203-10. Epub 2010 Dec 3.

40.

Shining a light on an opportunistic pathogen.

McBride MJ.

J Bacteriol. 2010 Dec;192(24):6325-6. doi: 10.1128/JB.01141-10. Epub 2010 Oct 15. No abstract available.

41.

Flavobacterium johnsoniae gldN and gldO are partially redundant genes required for gliding motility and surface localization of SprB.

Rhodes RG, Samarasam MN, Shrivastava A, van Baaren JM, Pochiraju S, Bollampalli S, McBride MJ.

J Bacteriol. 2010 Mar;192(5):1201-11. doi: 10.1128/JB.01495-09. Epub 2009 Dec 28.

42.

A protein secretion system linked to bacteroidete gliding motility and pathogenesis.

Sato K, Naito M, Yukitake H, Hirakawa H, Shoji M, McBride MJ, Rhodes RG, Nakayama K.

Proc Natl Acad Sci U S A. 2010 Jan 5;107(1):276-81. doi: 10.1073/pnas.0912010107. Epub 2009 Dec 4.

43.

Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis.

McBride MJ, Xie G, Martens EC, Lapidus A, Henrissat B, Rhodes RG, Goltsman E, Wang W, Xu J, Hunnicutt DW, Staroscik AM, Hoover TR, Cheng YQ, Stein JL.

Appl Environ Microbiol. 2009 Nov;75(21):6864-75. doi: 10.1128/AEM.01495-09. Epub 2009 Aug 28.

44.

The surprisingly diverse ways that prokaryotes move.

Jarrell KF, McBride MJ.

Nat Rev Microbiol. 2008 Jun;6(6):466-76. doi: 10.1038/nrmicro1900. Epub 2008 May 7. Review.

PMID:
18461074
45.

SprB is a cell surface component of the Flavobacterium johnsoniae gliding motility machinery.

Nelson SS, Bollampalli S, McBride MJ.

J Bacteriol. 2008 Apr;190(8):2851-7. doi: 10.1128/JB.01904-07. Epub 2008 Feb 15.

46.

Cell surface filaments of the gliding bacterium Flavobacterium johnsoniae revealed by cryo-electron tomography.

Liu J, McBride MJ, Subramaniam S.

J Bacteriol. 2007 Oct;189(20):7503-6. Epub 2007 Aug 10.

47.

Flavobacterium johnsoniae SprA is a cell surface protein involved in gliding motility.

Nelson SS, Glocka PP, Agarwal S, Grimm DP, McBride MJ.

J Bacteriol. 2007 Oct;189(19):7145-50. Epub 2007 Jul 20.

48.

Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii.

Xie G, Bruce DC, Challacombe JF, Chertkov O, Detter JC, Gilna P, Han CS, Lucas S, Misra M, Myers GL, Richardson P, Tapia R, Thayer N, Thompson LS, Brettin TS, Henrissat B, Wilson DB, McBride MJ.

Appl Environ Microbiol. 2007 Jun;73(11):3536-46. Epub 2007 Mar 30.

49.

Digital versus local anesthesia for finger lacerations: a randomized controlled trial.

Chale S, Singer AJ, Marchini S, McBride MJ, Kennedy D.

Acad Emerg Med. 2006 Oct;13(10):1046-50. Epub 2006 Sep 13.

50.

A mutation in Flavobacterium psychrophilum tlpB inhibits gliding motility and induces biofilm formation.

Alvarez B, Secades P, Prieto M, McBride MJ, Guijarro JA.

Appl Environ Microbiol. 2006 Jun;72(6):4044-53.

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