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Draft Genome Sequences of Four Lactococcus lactis Strains Isolated from Diverse Niches, Including Dairy Products, Grass, and Green Peas.

Roman Naranjo D, Callanan M, McAuliffe O.

Microbiol Resour Announc. 2019 Aug 29;8(35). pii: e00834-19. doi: 10.1128/MRA.00834-19.


Inhibition of L. monocytogenes Biofilm Formation by the Amidase Domain of the Phage vB_LmoS_293 Endolysin.

Pennone V, Sanz-Gaitero M, O'Connor P, Coffey A, Jordan K, van Raaij MJ, McAuliffe O.

Viruses. 2019 Aug 6;11(8). pii: E722. doi: 10.3390/v11080722.


Understanding and Exploiting Phage-Host Interactions.

Stone E, Campbell K, Grant I, McAuliffe O.

Viruses. 2019 Jun 18;11(6). pii: E567. doi: 10.3390/v11060567. Review.


Draft Genome Sequences of the Type Strains of Six Macrococcus Species.

Mazhar S, Altermann E, Hill C, McAuliffe O.

Microbiol Resour Announc. 2019 May 9;8(19). pii: e00344-19. doi: 10.1128/MRA.00344-19.


Draft Genome Sequences of Macrococcus caseolyticus, Macrococcus canis, Macrococcus bohemicus, and Macrococcus goetzii.

Mazhar S, Altermann E, Hill C, McAuliffe O.

Microbiol Resour Announc. 2019 May 9;8(19). pii: e00343-19. doi: 10.1128/MRA.00343-19.


Bacteriophages in Food Applications: From Foe to Friend.

O'Sullivan L, Bolton D, McAuliffe O, Coffey A.

Annu Rev Food Sci Technol. 2019 Mar 25;10:151-172. doi: 10.1146/annurev-food-032818-121747. Epub 2019 Jan 11.


Symposium review: Genomic investigations of flavor formation by dairy microbiota.

McAuliffe O, Kilcawley K, Stefanovic E.

J Dairy Sci. 2019 Jan;102(1):909-922. doi: 10.3168/jds.2018-15385. Epub 2018 Oct 19. Review.


The Genus Macrococcus: An Insight Into Its Biology, Evolution, and Relationship With Staphylococcus.

Mazhar S, Hill C, McAuliffe O.

Adv Appl Microbiol. 2018;105:1-50. doi: 10.1016/bs.aambs.2018.05.002. Epub 2018 Jun 13.


Listeria monocytogenes in Foods.

Jordan K, McAuliffe O.

Adv Food Nutr Res. 2018;86:181-213. doi: 10.1016/bs.afnr.2018.02.006. Epub 2018 Apr 3. Review.


Evaluation of the Potential of Lactobacillus paracasei Adjuncts for Flavor Compounds Development and Diversification in Short-Aged Cheddar Cheese.

Stefanovic E, Kilcawley KN, Roces C, Rea MC, O'Sullivan M, Sheehan JJ, McAuliffe O.

Front Microbiol. 2018 Jul 5;9:1506. doi: 10.3389/fmicb.2018.01506. eCollection 2018.


A rapid PCR-based method to discriminate Macrococcus caseolyticus and Macrococcus canis from closely-related Staphylococcus species based on the ctaC gene sequence.

Mazhar S, Hill C, McAuliffe O.

J Microbiol Methods. 2018 Sep;152:36-38. doi: 10.1016/j.mimet.2018.07.008. Epub 2018 Jul 17.


Comparison of Staphylococcus Phage K with Close Phage Relatives Commonly Employed in Phage Therapeutics.

Ajuebor J, Buttimer C, Arroyo-Moreno S, Chanishvili N, Gabriel EM, O'Mahony J, McAuliffe O, Neve H, Franz C, Coffey A.

Antibiotics (Basel). 2018 Apr 25;7(2). pii: E37. doi: 10.3390/antibiotics7020037.


Comparative genomics of Cp8viruses with special reference to Campylobacter phage vB_CjeM_los1, isolated from a slaughterhouse in Ireland.

O'Sullivan L, Lucid A, Neve H, Franz CMAP, Bolton D, McAuliffe O, Paul Ross R, Coffey A.

Arch Virol. 2018 Aug;163(8):2139-2154. doi: 10.1007/s00705-018-3845-3. Epub 2018 Apr 23.


Diversity of Listeria monocytogenes strains isolated from Agaricus bisporus mushroom production.

Pennone V, Lehardy A, Coffey A, Mcauliffe O, Jordan K.

J Appl Microbiol. 2018 Aug;125(2):586-595. doi: 10.1111/jam.13773. Epub 2018 May 23.


Symposium review: Lactococcus lactis from nondairy sources: Their genetic and metabolic diversity and potential applications in cheese.

McAuliffe O.

J Dairy Sci. 2018 Apr;101(4):3597-3610. doi: 10.3168/jds.2017-13331. Epub 2018 Feb 13. Review.


Bacteriophage endolysins and their applications.

Ajuebor J, McAuliffe O, O'Mahony J, Ross RP, Hill C, Coffey A.

Sci Prog. 2016 Jun 1;99(2):183-199. doi: 10.3184/003685016X14627913637705.


Draft Genome Sequences of Three Lactobacillusparacasei Strains, Members of the Nonstarter Microbiota of Mature Cheddar Cheese.

Stefanovic E, Fitzgerald G, McAuliffe O.

Genome Announc. 2017 Jul 20;5(29). pii: e00655-17. doi: 10.1128/genomeA.00655-17.


Strains of the Lactobacillus casei group show diverse abilities for the production of flavor compounds in 2 model systems.

Stefanovic E, Thierry A, Maillard MB, Bertuzzi A, Rea MC, Fitzgerald G, McAuliffe O, Kilcawley KN.

J Dairy Sci. 2017 Sep;100(9):6918-6929. doi: 10.3168/jds.2016-12408. Epub 2017 Jul 12.


Genetic, enzymatic and metabolite profiling of the Lactobacillus casei group reveals strain biodiversity and potential applications for flavour diversification.

Stefanovic E, Kilcawley KN, Rea MC, Fitzgerald GF, McAuliffe O.

J Appl Microbiol. 2017 May;122(5):1245-1261. doi: 10.1111/jam.13420. Epub 2017 Apr 4.


Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB.

Buttimer C, Hendrix H, Oliveira H, Casey A, Neve H, McAuliffe O, Ross RP, Hill C, Noben JP, O'Mahony J, Lavigne R, Coffey A.

Front Microbiol. 2017 Jan 24;8:44. doi: 10.3389/fmicb.2017.00044. eCollection 2017.


Bacteriophages and Bacterial Plant Diseases.

Buttimer C, McAuliffe O, Ross RP, Hill C, O'Mahony J, Coffey A.

Front Microbiol. 2017 Jan 20;8:34. doi: 10.3389/fmicb.2017.00034. eCollection 2017. Review.


Bacteriophage-based tools: recent advances and novel applications.

O'Sullivan L, Buttimer C, McAuliffe O, Bolton D, Coffey A.

F1000Res. 2016 Nov 29;5:2782. eCollection 2016. Review.


Inhibition of Listeria monocytogenes biofilms by bacteriocin-producing bacteria isolated from mushroom substrate.

Bolocan AS, Pennone V, O'Connor PM, Coffey A, Nicolau AI, McAuliffe O, Jordan K.

J Appl Microbiol. 2017 Jan;122(1):279-293. doi: 10.1111/jam.13337. Epub 2016 Dec 12.


The Eighth Central European Conference "Chemistry towards Biology": Snapshot.

Perczel A, Atanasov AG, Sklenář V, Nováček J, Papoušková V, Kadeřávek P, Žídek L, Kozłowski H, Wątły J, Hecel A, Kołkowska P, Koča J, Svobodová-Vařeková R, Pravda L, Sehnal D, Horský V, Geidl S, Enriz RD, Matějka P, Jeništová A, Dendisová M, Kokaislová A, Weissig V, Olsen M, Coffey A, Ajuebor J, Keary R, Sanz-Gaitero M, van Raaij MJ, McAuliffe O, Waltenberger B, Mocan A, Šmejkal K, Heiss EH, Diederich M, Musioł R, Košmrlj J, Polański J, Jampílek J.

Molecules. 2016 Oct 17;21(10). pii: E1381.


Advances in the genomics and metabolomics of dairy lactobacilli: A review.

Stefanovic E, Fitzgerald G, McAuliffe O.

Food Microbiol. 2017 Feb;61:33-49. doi: 10.1016/ Epub 2016 Aug 31. Review.


Genome Sequence of Jumbo Phage vB_AbaM_ME3 of Acinetobacter baumanni.

Buttimer C, O'Sullivan L, Elbreki M, Neve H, McAuliffe O, Ross RP, Hill C, O'Mahony J, Coffey A.

Genome Announc. 2016 Aug 25;4(4). pii: e00431-16. doi: 10.1128/genomeA.00431-16.


Draft Genome Sequences of Listeria monocytogenes Serotype 4b Strains 944 and 2993 and Serotype 1/2c Strains 198 and 2932.

Casey A, McAuliffe O, Fox EM, Leong D, Gahan CG, Jordan K.

Genome Announc. 2016 Jun 2;4(3). pii: e00482-16. doi: 10.1128/genomeA.00482-16.


The impact of virtual fracture clinics on medical education - a medical student perspective.

McAuliffe O, Lami M, Lami T.

Med Educ Online. 2016 Mar 15;21:30950. doi: 10.3402/meo.v21.30950. eCollection 2016. No abstract available.


Draft Genome Sequence of Lactobacillus casei DPC6800, an Isolate with the Potential to Diversify Flavor in Cheese.

Stefanovic E, Casey A, Cotter P, Cavanagh D, Fitzgerald G, McAuliffe O.

Genome Announc. 2016 Mar 3;4(2). pii: e00063-16. doi: 10.1128/genomeA.00063-16.


Teledermatology in medical education - a 'rash' decision?

Lami M, Malabanan K, McAuliffe O.

Med Educ Online. 2015 Dec 15;20:30576. doi: 10.3402/meo.v20.30576. eCollection 2015. No abstract available.


Characterization of a Bacteriophage-Derived Murein Peptidase for Elimination of Antibiotic-Resistant Staphylococcus aureus.

Keary R, Sanz-Gaitero M, van Raaij MJ, O'Mahony J, Fenton M, McAuliffe O, Hill C, Ross RP, Coffey A.

Curr Protein Pept Sci. 2016;17(2):183-90. Review.


A tail of two phages: genomic and functional analysis of Listeria monocytogenes phages vB_LmoS_188 and vB_LmoS_293 reveal the receptor-binding proteins involved in host specificity.

Casey A, Jordan K, Neve H, Coffey A, McAuliffe O.

Front Microbiol. 2015 Oct 9;6:1107. doi: 10.3389/fmicb.2015.01107. eCollection 2015.


Characterisation of the antibacterial properties of a bacterial derived peptidoglycan hydrolase (LysCs4), active against C. sakazakii and other Gram-negative food-related pathogens.

Endersen L, Coffey A, Ross RP, McAuliffe O, Hill C, O'Mahony J.

Int J Food Microbiol. 2015 Dec 23;215:79-85. doi: 10.1016/j.ijfoodmicro.2015.08.007. Epub 2015 Aug 14.


Differential Gene Expression of Three Gene Targets among Persistent and Nonpersistent Listeria monocytogenes Strains in the Presence or Absence of Benzethonium Chloride.

Mazza R, Mazzette R, McAuliffe O, Jordan K, Fox EM.

J Food Prot. 2015 Aug;78(8):1569-73. doi: 10.4315/0362-028X.JFP-14-510.


Complete Genome Sequence of Listeria monocytogenes Strain DPC6895, a Serotype 1/2b Isolate from Bovine Raw Milk.

Casey A, McAuliffe O, Coffey A, Hunt K, Fanning S, Fox E, Jordan K.

Genome Announc. 2015 Jun 11;3(3). pii: e00629-15. doi: 10.1128/genomeA.00629-15.


Complete Genome Sequences of vB_LmoS_188 and vB_LmoS_293, Two Bacteriophages with Specificity for Listeria monocytogenes Strains of Serotypes 4b and 4e.

Casey A, Jordan K, Coffey A, McAuliffe O.

Genome Announc. 2015 Apr 9;3(2). pii: e00040-15. doi: 10.1128/genomeA.00040-15.


Evaluation of Lactococcus lactis Isolates from Nondairy Sources with Potential Dairy Applications Reveals Extensive Phenotype-Genotype Disparity and Implications for a Revised Species.

Cavanagh D, Casey A, Altermann E, Cotter PD, Fitzgerald GF, McAuliffe O.

Appl Environ Microbiol. 2015 Jun 15;81(12):3961-72. doi: 10.1128/AEM.04092-14. Epub 2015 Apr 3.


From field to fermentation: the origins of Lactococcus lactis and its domestication to the dairy environment.

Cavanagh D, Fitzgerald GF, McAuliffe O.

Food Microbiol. 2015 May;47:45-61. doi: 10.1016/ Epub 2014 Nov 11. Review.


Complete Genome Sequence of vB_EcoM_112, a T-Even-Type Bacteriophage Specific for Escherichia coli O157:H7.

Coffey B, Ross RP, O'Flynn G, O'Sullivan O, Casey A, Callanan M, Coffey A, McAuliffe O.

Genome Announc. 2014 Nov 13;2(6). pii: e00393-14. doi: 10.1128/genomeA.00393-14.


Genome analysis of Cronobacter phage vB_CsaP_Ss1 reveals an endolysin with potential for biocontrol of Gram-negative bacterial pathogens.

Endersen L, Guinane CM, Johnston C, Neve H, Coffey A, Ross RP, McAuliffe O, O'Mahony J.

J Gen Virol. 2015 Feb;96(Pt 2):463-77. doi: 10.1099/vir.0.068494-0. Epub 2014 Nov 4.


Genome analysis of the staphylococcal temperate phage DW2 and functional studies on the endolysin and tail hydrolase.

Keary R, McAuliffe O, Ross RP, Hill C, O'Mahony J, Coffey A.

Bacteriophage. 2014 Mar 6;4:e28451. eCollection 2014.


Extraction and analysis of plasmid DNA from Listeria monocytogenes.

Casey A, McAuliffe O.

Methods Mol Biol. 2014;1157:181-6. doi: 10.1007/978-1-4939-0703-8_15.


Transcriptome analysis of Listeria monocytogenes exposed to biocide stress reveals a multi-system response involving cell wall synthesis, sugar uptake, and motility.

Casey A, Fox EM, Schmitz-Esser S, Coffey A, McAuliffe O, Jordan K.

Front Microbiol. 2014 Feb 28;5:68. doi: 10.3389/fmicb.2014.00068. eCollection 2014.


Phages of non-dairy lactococci: isolation and characterization of ΦL47, a phage infecting the grass isolate Lactococcus lactis ssp. cremoris DPC6860.

Cavanagh D, Guinane CM, Neve H, Coffey A, Ross RP, Fitzgerald GF, McAuliffe O.

Front Microbiol. 2014 Jan 13;4:417. doi: 10.3389/fmicb.2013.00417. eCollection 2014 Jan 13.


Phage therapy in the food industry.

Endersen L, O'Mahony J, Hill C, Ross RP, McAuliffe O, Coffey A.

Annu Rev Food Sci Technol. 2014;5:327-49. doi: 10.1146/annurev-food-030713-092415. Epub 2014 Jan 9. Review.


Characterization of plant-derived lactococci on the basis of their volatile compounds profile when grown in milk.

Alemayehu D, Hannon JA, McAuliffe O, Ross RP.

Int J Food Microbiol. 2014 Feb 17;172:57-61. doi: 10.1016/j.ijfoodmicro.2013.11.024. Epub 2013 Dec 3.


Bacteriophage-Derived Peptidase CHAP(K) Eliminates and Prevents Staphylococcal Biofilms.

Fenton M, Keary R, McAuliffe O, Ross RP, O'Mahony J, Coffey A.

Int J Microbiol. 2013;2013:625341. doi: 10.1155/2013/625341. Epub 2013 Feb 3.


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