Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 49

1.

Partition of Repeat-Induced Point Mutations Reveals Structural Aspects of Homologous DNA-DNA Pairing.

Mazur AK, Gladyshev E.

Biophys J. 2018 Aug 21;115(4):605-615. doi: 10.1016/j.bpj.2018.06.030. Epub 2018 Jul 21.

PMID:
30086830
2.

Weak nanoscale chaos and anomalous relaxation in DNA.

Mazur AK.

Phys Rev E. 2017 Jun;95(6-1):062417. doi: 10.1103/PhysRevE.95.062417. Epub 2017 Jun 26.

PMID:
28709320
3.

Homologous Pairing between Long DNA Double Helices.

Mazur AK.

Phys Rev Lett. 2016 Apr 15;116(15):158101. doi: 10.1103/PhysRevLett.116.158101. Epub 2016 Apr 12.

PMID:
27127987
4.

Assessment of toxicity using dehydrogenases activity and mathematical modeling.

Matyja K, Małachowska-Jutsz A, Mazur AK, Grabas K.

Ecotoxicology. 2016 Jul;25(5):924-39. doi: 10.1007/s10646-016-1650-x. Epub 2016 Mar 28.

PMID:
27021434
5.

Algebraic Statistics of Poincaré Recurrences in a DNA Molecule.

Mazur AK, Shepelyansky DL.

Phys Rev Lett. 2015 Oct 30;115(18):188104. doi: 10.1103/PhysRevLett.115.188104. Epub 2015 Oct 30.

PMID:
26565502
6.

Atomic force microscopy study of DNA flexibility on short length scales: smooth bending versus kinking.

Mazur AK, Maaloum M.

Nucleic Acids Res. 2014 Dec 16;42(22):14006-12. doi: 10.1093/nar/gku1192. Epub 2014 Nov 20.

7.

DNA flexibility on short length scales probed by atomic force microscopy.

Mazur AK, Maaloum M.

Phys Rev Lett. 2014 Feb 14;112(6):068104. Epub 2014 Feb 14.

PMID:
24580711
8.

Comment on "Length scale dependence of DNA mechanical properties".

Mazur AK.

Phys Rev Lett. 2013 Oct 25;111(17):179801. Epub 2013 Oct 25. No abstract available.

PMID:
24206521
9.

On the origin of thermal untwisting of DNA.

Mazur AK.

J Phys Chem B. 2013 Feb 14;117(6):1857-61. doi: 10.1021/jp311408h. Epub 2013 Jan 30.

PMID:
23331263
10.

Torque transfer coefficient in DNA under torsional stress.

Mazur AK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Jul;86(1 Pt 1):011914. Epub 2012 Jul 16.

PMID:
23005459
11.

Local elasticity of strained DNA studied by all-atom simulations.

Mazur AK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2011 Aug;84(2 Pt 1):021903. Epub 2011 Aug 3.

PMID:
21929016
12.

Mycoplasma gallisepticum produces a histone-like protein that recognizes base mismatches in DNA.

Kamashev D, Oberto J, Serebryakova M, Gorbachev A, Zhukova Y, Levitskii S, Mazur AK, Govorun V.

Biochemistry. 2011 Oct 11;50(40):8692-702. doi: 10.1021/bi2009097. Epub 2011 Sep 14.

PMID:
21877760
13.

Anharmonic torsional stiffness of DNA revealed under small external torques.

Mazur AK.

Phys Rev Lett. 2010 Jul 2;105(1):018102. Epub 2010 Jun 29.

PMID:
20867482
14.

Modeling DNA Dynamics under Steady Deforming Forces and Torques.

Mazur AK.

J Chem Theory Comput. 2009 Aug 11;5(8):2149-57. doi: 10.1021/ct900124n.

PMID:
26613154
15.

Analysis of accordion DNA stretching revealed by the gold cluster ruler.

Mazur AK.

Phys Rev E Stat Nonlin Soft Matter Phys. 2009 Jul;80(1 Pt 1):010901. Epub 2009 Jul 2.

PMID:
19658644
16.

Kinetic and thermodynamic DNA elasticity at micro- and mesoscopic scales.

Mazur AK.

J Phys Chem B. 2009 Feb 19;113(7):2077-89. doi: 10.1021/jp8098945.

PMID:
19209945
17.

The electrostatic origin of low-hydration polymorphism in DNA.

Mazur AK.

Chemphyschem. 2008 Dec 22;9(18):2691-4. doi: 10.1002/cphc.200800446.

PMID:
19006154
18.

Statistics of time-limited ensembles of bent DNA conformations.

Mazur AK.

J Phys Chem B. 2008 Apr 24;112(16):4975-82. doi: 10.1021/jp711815x. Epub 2008 Mar 29.

PMID:
18373376
19.

The potential for dose dumping in normal tissues with IMRT for pelvic and H&N cancers.

Reddy NM, Mazur AK, Sampath S, Osian A, Sood BM, Ravi A, Nori D.

Med Dosim. 2008 Spring;33(1):55-61. doi: 10.1016/j.meddos.2007.05.001.

PMID:
18262124
20.

HU binds and folds single-stranded DNA.

Kamashev D, Balandina A, Mazur AK, Arimondo PB, Rouviere-Yaniv J.

Nucleic Acids Res. 2008 Feb;36(3):1026-36. Epub 2007 Dec 20.

21.

Ion dynamics and water percolation effects in DNA polymorphism.

Brovchenko I, Krukau A, Oleinikova A, Mazur AK.

J Am Chem Soc. 2008 Jan 9;130(1):121-31. Epub 2007 Dec 6.

PMID:
18052374
22.

Wormlike chain theory and bending of short DNA.

Mazur AK.

Phys Rev Lett. 2007 May 25;98(21):218102. Epub 2007 May 24.

PMID:
17677812
23.

Water clustering and percolation in low hydration DNA shells.

Brovchenko I, Krukau A, Oleinikova A, Mazur AK.

J Phys Chem B. 2007 Mar 29;111(12):3258-66. Epub 2007 Mar 8.

PMID:
17388475
24.

Water percolation governs polymorphic transitions and conductivity of DNA.

Brovchenko I, Krukau A, Oleinikova A, Mazur AK.

Phys Rev Lett. 2006 Sep 29;97(13):137801. Epub 2006 Sep 28.

PMID:
17026075
25.

Evaluation of elastic properties of atomistic DNA models.

Mazur AK.

Biophys J. 2006 Dec 15;91(12):4507-18. Epub 2006 Sep 29.

26.

Comparison of different torsion angle approaches for NMR structure determination.

Bardiaux B, Malliavin TE, Nilges M, Mazur AK.

J Biomol NMR. 2006 Mar;34(3):153-66.

PMID:
16604424
27.

Structural changes of region 1-16 of the Alzheimer disease amyloid beta-peptide upon zinc binding and in vitro aging.

Zirah S, Kozin SA, Mazur AK, Blond A, Cheminant M, Ségalas-Milazzo I, Debey P, Rebuffat S.

J Biol Chem. 2006 Jan 27;281(4):2151-61. Epub 2005 Nov 21.

28.

Electrostatic Polymer Condensation and the A/B Polymorphism in DNA:  Sequence Effects.

Mazur AK.

J Chem Theory Comput. 2005 Mar;1(2):325-36. doi: 10.1021/ct049926d.

PMID:
26641304
29.

Single-stranded breaks relax intrinsic curvature in DNA?

Kamashev DE, Mazur AK.

Biochemistry. 2004 Jun 29;43(25):8160-8.

PMID:
15209512
30.

Molecular cloning and characterization of an endo-1,3-beta-D-glucanase from the mollusk Spisula sachalinensis.

Kozhemyako VB, Rebrikov DV, Lukyanov SA, Bogdanova EA, Marin A, Mazur AK, Kovalchuk SN, Agafonova EV, Sova VV, Elyakova LA, Rasskazov VA.

Comp Biochem Physiol B Biochem Mol Biol. 2004 Feb;137(2):169-78.

PMID:
14990213
31.

Titration in silico of reversible B <=> A transitions in DNA.

Mazur AK.

J Am Chem Soc. 2003 Jul 2;125(26):7849-59.

PMID:
12823003
32.

DNA dynamics in a water drop without counterions.

Mazur AK.

J Am Chem Soc. 2002 Dec 11;124(49):14707-15.

PMID:
12465982
33.

Comparative bending dynamics in DNA with and without regularly repeated adenine tracts.

Mazur AK, Kamashev DE.

Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Jul;66(1 Pt 1):011917. Epub 2002 Jul 29.

PMID:
12241394
34.

Sheep prion protein synthetic peptide spanning helix 1 and beta-strand 2 (residues 142-166) shows beta-hairpin structure in solution.

Kozin SA, Bertho G, Mazur AK, Rabesona H, Girault JP, Haertlé T, Takahashi M, Debey P, Hoa GH.

J Biol Chem. 2001 Dec 7;276(49):46364-70. Epub 2001 Sep 27.

35.
36.
38.

The catalytic mechanism of alpha-amylases based upon enzyme crystal structures and model building calculations.

Mazur AK, Haser R, Payan F.

Biochem Biophys Res Commun. 1994 Oct 14;204(1):297-302.

PMID:
7945374
39.

Multiple attack mechanism in the porcine pancreatic alpha-amylase hydrolysis of amylose and amylopectin.

Mazur AK, Nakatani H.

Arch Biochem Biophys. 1993 Oct;306(1):29-38.

PMID:
8215418
40.
41.

[Multiple attack in the mechanism of endoglucanase action].

Bezukladnikov PV, Eliakova LA, Mazur AK.

Bioorg Khim. 1992 Sep;18(9):1141-63. Review. Russian.

PMID:
1472113
42.

Schematic methods for probabilistic enzyme kinetics.

Mazur AK, Kuchinski AV.

J Theor Biol. 1992 Apr 7;155(3):387-407.

PMID:
1619958
43.

[Global optimization of the conformational energy of oligopeptides using a tunnel algorithm].

Petukhov MG, Dorofeev VE, Abagian RA, Mazur AK.

Biofizika. 1992 Mar-Apr;37(2):226-30. Russian.

PMID:
7578315
44.

A probabilistic view on steady-state enzyme reactions.

Mazur AK.

J Theor Biol. 1991 Jan 21;148(2):229-42.

PMID:
2016891
45.
46.
47.

Most-probable distribution at enzyme depolymerization of polysaccharides.

Mazur AK.

Biopolymers. 1984 May;23(5):859-76. No abstract available.

PMID:
6608966
48.

[Kinetics of glucose accumulation during depolymerization of polysaccharides by enzymes with different mechanisms of action].

Mazur AK, Eliakova LA.

Mol Biol (Mosk). 1983 Jan-Feb;17(1):101-11. Russian. No abstract available.

PMID:
6865932
49.

[Computer modeling of enzymatic hydrolysis of a linear polysaccharide by endoglycanases].

Eliakova LA, Mazur AK.

Mol Biol (Mosk). 1982 May-Jun;16(3):499-510. Russian.

PMID:
6980368

Supplemental Content

Loading ...
Support Center