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Items: 50

1.

Fungal species boundaries in the genomics era.

Matute DR, Sepúlveda VE.

Fungal Genet Biol. 2019 Jul 4:103249. doi: 10.1016/j.fgb.2019.103249. [Epub ahead of print] Review.

2.

Wolbachia Acquisition by Drosophila yakuba-clade Hosts and Transfer of Incompatibility Loci Between Distantly Related Wolbachia.

Cooper BS, Vanderpool D, Conner WR, Matute DR, Turelli M.

Genetics. 2019 Jun 21. pii: genetics.302349.2019. doi: 10.1534/genetics.119.302349. [Epub ahead of print]

3.

Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia.

Mideros MF, Turissini DA, Guayazán N, Ibarra-Avila H, Danies G, Cárdenas M, Myers K, Tabima J, Goss EM, Bernal A, Lagos LE, Grajales A, Gonzalez LN, Cooke DEL, Fry WE, Grünwald N, Matute DR, Restrepo S.

Persoonia. 2018 Dec;41:39-55. doi: 10.3767/persoonia.2018.41.03.

4.

Speciation: On the Scent of Mate Discrimination Genes.

Coughlan JM, Matute DR.

Curr Biol. 2018 Dec 17;28(24):R1389-R1391. doi: 10.1016/j.cub.2018.10.055.

PMID:
30562530
5.

Gene exchange between two divergent species of the fungal human pathogen, Coccidioides.

Maxwell CS, Mattox K, Turissini DA, Teixeira MM, Barker BM, Matute DR.

Evolution. 2019 Jan;73(1):42-58. doi: 10.1111/evo.13643. Epub 2018 Dec 4.

PMID:
30414183
6.

Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change.

Nagy O, Nuez I, Savisaar R, Peluffo AE, Yassin A, Lang M, Stern DL, Matute DR, David JR, Courtier-Orgogozo V.

Curr Biol. 2018 Nov 5;28(21):3450-3457.e13. doi: 10.1016/j.cub.2018.08.047. Epub 2018 Oct 18.

PMID:
30344115
7.

Recent admixture between species of the fungal pathogen Histoplasma.

Maxwell CS, Sepulveda VE, Turissini DA, Goldman WE, Matute DR.

Evol Lett. 2018 Jun 22;2(3):210-220. doi: 10.1002/evl3.59. eCollection 2018 Jun.

8.

Genetic divergence and the number of hybridizing species affect the path to homoploid hybrid speciation.

Comeault AA, Matute DR.

Proc Natl Acad Sci U S A. 2018 Sep 25;115(39):9761-9766. doi: 10.1073/pnas.1809685115. Epub 2018 Sep 12.

9.

A Maladaptive Combination of Traits Contributes to the Maintenance of a Drosophila Hybrid Zone.

Cooper BS, Sedghifar A, Nash WT, Comeault AA, Matute DR.

Curr Biol. 2018 Sep 24;28(18):2940-2947.e6. doi: 10.1016/j.cub.2018.07.005. Epub 2018 Aug 30.

PMID:
30174184
10.

The Role of Transposable Elements in Speciation.

Serrato-Capuchina A, Matute DR.

Genes (Basel). 2018 May 15;9(5). pii: E254. doi: 10.3390/genes9050254. Review.

11.

Supervised machine learning reveals introgressed loci in the genomes of Drosophila simulans and D. sechellia.

Schrider DR, Ayroles J, Matute DR, Kern AD.

PLoS Genet. 2018 Apr 23;14(4):e1007341. doi: 10.1371/journal.pgen.1007341. eCollection 2018 Apr.

12.

When genes move, genomes collide.

Brandvain Y, Matute DR.

PLoS Genet. 2018 Apr 12;14(4):e1007286. doi: 10.1371/journal.pgen.1007286. eCollection 2018 Apr. No abstract available.

13.

Genome Sequences Reveal Cryptic Speciation in the Human Pathogen Histoplasma capsulatum.

Sepúlveda VE, Márquez R, Turissini DA, Goldman WE, Matute DR.

MBio. 2017 Dec 5;8(6). pii: e01339-17. doi: 10.1128/mBio.01339-17.

14.

The Rate of Evolution of Postmating-Prezygotic Reproductive Isolation in Drosophila.

Turissini DA, McGirr JA, Patel SS, David JR, Matute DR.

Mol Biol Evol. 2018 Feb 1;35(2):312-334. doi: 10.1093/molbev/msx271.

15.

Fine scale mapping of genomic introgressions within the Drosophila yakuba clade.

Turissini DA, Matute DR.

PLoS Genet. 2017 Sep 5;13(9):e1006971. doi: 10.1371/journal.pgen.1006971. eCollection 2017 Sep.

16.

Species boundaries in the human pathogen Paracoccidioides.

Turissini DA, Gomez OM, Teixeira MM, McEwen JG, Matute DR.

Fungal Genet Biol. 2017 Sep;106:9-25. doi: 10.1016/j.fgb.2017.05.007. Epub 2017 Jun 9.

17.

A nonrandom subset of olfactory genes is associated with host preference in the fruit fly Drosophila orena.

Comeault AA, Serrato-Capuchina A, Turissini DA, McLaughlin PJ, David JR, Matute DR.

Evol Lett. 2017 May 9;1(2):73-85. doi: 10.1002/evl3.7. eCollection 2017 Jun.

18.

The ability of Drosophila hybrids to locate food declines with parental divergence.

Turissini DA, Comeault AA, Liu G, Lee YC, Matute DR.

Evolution. 2017 Apr;71(4):960-973. doi: 10.1111/evo.13180. Epub 2017 Feb 17.

PMID:
28085186
19.

The Effect of Temperature on Drosophila Hybrid Fitness.

Miller CJ, Matute DR.

G3 (Bethesda). 2017 Feb 9;7(2):377-385. doi: 10.1534/g3.116.034926.

20.

Wolbachia in the Drosophila yakuba Complex: Pervasive Frequency Variation and Weak Cytoplasmic Incompatibility, but No Apparent Effect on Reproductive Isolation.

Cooper BS, Ginsberg PS, Turelli M, Matute DR.

Genetics. 2017 Jan;205(1):333-351. doi: 10.1534/genetics.116.196238. Epub 2016 Nov 7.

21.

Evolutionary Genetics: Reuse, Recycle, Converge.

Miller CJJ, Matute DR.

Curr Biol. 2016 Sep 26;26(18):R838-R840. doi: 10.1016/j.cub.2016.07.075.

22.

Correlated evolution of male and female reproductive traits drive a cascading effect of reinforcement in Drosophila yakuba.

Comeault AA, Venkat A, Matute DR.

Proc Biol Sci. 2016 Jul 27;283(1835). pii: 20160730. doi: 10.1098/rspb.2016.0730.

23.

Reinforcement's incidental effects on reproductive isolation between conspecifics.

Comeault AA, Matute DR.

Curr Zool. 2016 Apr;62(2):135-143. doi: 10.1093/cz/zow002. Epub 2016 Mar 9.

24.

Correction: Fine Mapping of Dominant X-Linked Incompatibility Alleles in Drosophila Hybrids.

Matute DR, Gavin-Smyth J.

PLoS Genet. 2015 Oct 7;11(10):e1005558. doi: 10.1371/journal.pgen.1005558. eCollection 2015 Oct. No abstract available.

25.

Noisy neighbors can hamper the evolution of reproductive isolation by reinforcing selection.

Matute DR.

Am Nat. 2015 Feb;185(2):253-69. doi: 10.1086/679504. Epub 2015 Jan 14.

PMID:
25616143
26.

The evolution of reproductive isolation in the Drosophila yakuba complex of species.

Turissini DA, Liu G, David JR, Matute DR.

J Evol Biol. 2015 Mar;28(3):557-75. doi: 10.1111/jeb.12588.

27.

Speciation: the strength of natural selection driving reinforcement.

Matute DR, Ortiz-Barrientos D.

Curr Biol. 2014 Oct 6;24(19):R955-7. doi: 10.1016/j.cub.2014.08.033.

28.

The magnitude of behavioral isolation is affected by characteristics of the mating community.

Matute DR.

Ecol Evol. 2014 Jul;4(14):2945-56. doi: 10.1002/ece3.1142. Epub 2014 Jun 22.

29.

Variable post-zygotic isolation in Drosophila melanogaster/D. simulans hybrids.

Matute DR, Gavin-Smyth J, Liu G.

J Evol Biol. 2014 Aug;27(8):1691-705. doi: 10.1111/jeb.12422. Epub 2014 Jun 12.

30.

Speciation in fungal and oomycete plant pathogens.

Restrepo S, Tabima JF, Mideros MF, Grünwald NJ, Matute DR.

Annu Rev Phytopathol. 2014;52:289-316. doi: 10.1146/annurev-phyto-102313-050056. Epub 2014 May 30. Review.

PMID:
24906125
31.

Hybridization occurs between Drosophila simulans and D. sechellia in the Seychelles archipelago.

Matute DR, Ayroles JF.

J Evol Biol. 2014 Jun;27(6):1057-68. doi: 10.1111/jeb.12391. Epub 2014 Apr 28.

32.

Fine mapping of dominant X-linked incompatibility alleles in Drosophila hybrids.

Matute DR, Gavin-Smyth J.

PLoS Genet. 2014 Apr 17;10(4):e1004270. doi: 10.1371/journal.pgen.1004270. eCollection 2014 Apr. Erratum in: PLoS Genet. 2015 Oct;11(10):e1005558.

33.

The role of founder effects on the evolution of reproductive isolation.

Matute DR.

J Evol Biol. 2013 Nov;26(11):2299-311. doi: 10.1111/jeb.12246. Epub 2013 Oct 1.

34.

Macroevolutionary speciation rates are decoupled from the evolution of intrinsic reproductive isolation in Drosophila and birds.

Rabosky DL, Matute DR.

Proc Natl Acad Sci U S A. 2013 Sep 17;110(38):15354-9. doi: 10.1073/pnas.1305529110. Epub 2013 Sep 3.

35.

The influence of abdominal pigmentation on desiccation and ultraviolet resistance in two species of Drosophila.

Matute DR, Harris A.

Evolution. 2013 Aug;67(8):2451-60. doi: 10.1111/evo.12122. Epub 2013 May 3.

PMID:
23888866
36.

Embryonic lethality leads to hybrid male inviability in hybrids between Drosophila melanogaster and D. santomea.

Gavin-Smyth J, Matute DR.

Ecol Evol. 2013 Jun;3(6):1580-9. doi: 10.1002/ece3.573. Epub 2013 Apr 23.

37.

Revisiting an old riddle: what determines genetic diversity levels within species?

Leffler EM, Bullaughey K, Matute DR, Meyer WK, Ségurel L, Venkat A, Andolfatto P, Przeworski M.

PLoS Biol. 2012;10(9):e1001388. doi: 10.1371/journal.pbio.1001388. Epub 2012 Sep 11.

38.

Reinforcement can overcome gene flow during speciation in Drosophila.

Matute DR.

Curr Biol. 2010 Dec 21;20(24):2229-33. doi: 10.1016/j.cub.2010.11.036. Epub 2010 Dec 2.

39.

A test of the snowball theory for the rate of evolution of hybrid incompatibilities.

Matute DR, Butler IA, Turissini DA, Coyne JA.

Science. 2010 Sep 17;329(5998):1518-21. doi: 10.1126/science.1193440.

40.

Reinforcement of gametic isolation in Drosophila.

Matute DR.

PLoS Biol. 2010 Mar 23;8(3):e1000341. doi: 10.1371/journal.pbio.1000341.

41.

Little effect of the tan locus on pigmentation in female hybrids between Drosophila santomea and D. melanogaster.

Matute DR, Butler IA, Coyne JA.

Cell. 2009 Dec 11;139(6):1180-8. doi: 10.1016/j.cell.2009.10.033.

42.

Intrinsic reproductive isolation between two sister species of Drosophila.

Matute DR, Coyne JA.

Evolution. 2010 Apr 1;64(4):903-20. doi: 10.1111/j.1558-5646.2009.00879.x. Epub 2009 Nov 5.

PMID:
19891626
43.

Temperature-based extrinsic reproductive isolation in two species of Drosophila.

Matute DR, Novak CJ, Coyne JA.

Evolution. 2009 Mar;63(3):595-612. doi: 10.1111/j.1558-5646.2008.00588.x. Epub 2008 Dec 12.

PMID:
19087181
44.

Evidence for positive selection in putative virulence factors within the Paracoccidioides brasiliensis species complex.

Matute DR, Quesada-Ocampo LM, Rauscher JT, McEwen JG.

PLoS Negl Trop Dis. 2008 Sep 17;2(9):e296. doi: 10.1371/journal.pntd.0000296.

45.

Background selection at the chitin synthase II (chs2) locus in Paracoccidioides brasiliensis species complex.

Matute DR, Torres IP, Salgado-Salazar C, Restrepo A, McEwen JG.

Fungal Genet Biol. 2007 May;44(5):357-67. Epub 2007 Jan 19.

PMID:
17331762
46.

Genome size and ploidy of Paracoccidioides brasiliensis reveals a haploid DNA content: flow cytometry and GP43 sequence analysis.

Almeida AJ, Matute DR, Carmona JA, Martins M, Torres I, McEwen JG, Restrepo A, Leão C, Ludovico P, Rodrigues F.

Fungal Genet Biol. 2007 Jan;44(1):25-31. Epub 2006 Aug 1.

PMID:
16879998
47.

Hunting for insect-specific protein domains.

Matute DR, Barreto-Hernandez E, Falquet L.

In Silico Biol. 2006;6(1-2):35-42.

PMID:
16789911
48.

Microsatellite analysis of three phylogenetic species of Paracoccidioides brasiliensis.

Matute DR, Sepulveda VE, Quesada LM, Goldman GH, Taylor JW, Restrepo A, McEwen JG.

J Clin Microbiol. 2006 Jun;44(6):2153-7.

49.

Cryptic speciation and recombination in the fungus Paracoccidioides brasiliensis as revealed by gene genealogies.

Matute DR, McEwen JG, Puccia R, Montes BA, San-Blas G, Bagagli E, Rauscher JT, Restrepo A, Morais F, Niño-Vega G, Taylor JW.

Mol Biol Evol. 2006 Jan;23(1):65-73. Epub 2005 Sep 8.

PMID:
16151188
50.

The naked-tailed armadillo Cabassous centralis (Miller 1899): a new host to Paracoccidioides brasiliensis. Molecular identification of the isolate.

Corredor GG, Peralta LA, Castaño JH, Zuluaga JS, Henao B, Arango M, Tabares AM, Matute DR, McEwen JG, Restrepo A.

Med Mycol. 2005 May;43(3):275-80.

PMID:
16010854

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