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Items: 1 to 50 of 151

1.

Xenogeneic Regulation of the Bacterial Transcription Machinery.

Tabib-Salazar A, Mulvenna N, Severinov K, Matthews SJ, Wigneshweraraj S.

J Mol Biol. 2019 Feb 15. pii: S0022-2836(19)30085-3. doi: 10.1016/j.jmb.2019.02.008. [Epub ahead of print] Review.

2.

Efficient Single-Strand Break Repair Requires Binding to Both Poly(ADP-Ribose) and DNA by the Central BRCT Domain of XRCC1.

Polo LM, Xu Y, Hornyak P, Garces F, Zeng Z, Hailstone R, Matthews SJ, Caldecott KW, Oliver AW, Pearl LH.

Cell Rep. 2019 Jan 15;26(3):573-581.e5. doi: 10.1016/j.celrep.2018.12.082.

3.

Physical Determinants of Amyloid Assembly in Biofilm Formation.

Andreasen M, Meisl G, Taylor JD, Michaels TCT, Levin A, Otzen DE, Chapman MR, Dobson CM, Matthews SJ, Knowles TPJ.

MBio. 2019 Jan 8;10(1). pii: e02279-18. doi: 10.1128/mBio.02279-18.

4.

Trials, Tribulations, and Triumphs: Research and Publishing From the Undergraduate Perspective.

Matthews SJ, Rosa MN.

Front Psychol. 2018 Dec 3;9:2411. doi: 10.3389/fpsyg.2018.02411. eCollection 2018. No abstract available.

5.

Protein assemblies ejected directly from native membranes yield complexes for mass spectrometry.

Chorev DS, Baker LA, Wu D, Beilsten-Edmands V, Rouse SL, Zeev-Ben-Mordehai T, Jiko C, Samsudin F, Gerle C, Khalid S, Stewart AG, Matthews SJ, Grünewald K, Robinson CV.

Science. 2018 Nov 16;362(6416):829-834. doi: 10.1126/science.aau0976. Erratum in: Science. 2019 Apr 26;364(6438):.

6.

T7 phage factor required for managing RpoS in Escherichia coli.

Tabib-Salazar A, Liu B, Barker D, Burchell L, Qimron U, Matthews SJ, Wigneshweraraj S.

Proc Natl Acad Sci U S A. 2018 Jun 5;115(23):E5353-E5362. doi: 10.1073/pnas.1800429115. Epub 2018 May 22.

7.

Ecology and Biogenesis of Functional Amyloids in Pseudomonas.

Rouse SL, Matthews SJ, Dueholm MS.

J Mol Biol. 2018 Oct 12;430(20):3685-3695. doi: 10.1016/j.jmb.2018.05.004. Epub 2018 May 16. Review.

8.

Successful pregnancy in a woman previously suffering from β-thalassemia following transplantation of ovarian tissue cryopreserved before puberty.

Matthews SJ, Picton H, Ernst E, Andersen CY.

Minerva Ginecol. 2018 Aug;70(4):432-435. doi: 10.23736/S0026-4784.18.04240-5. Epub 2018 Apr 24.

PMID:
29696941
9.

Full shut-off of Escherichia coli RNA-polymerase by T7 phage requires a small phage-encoded DNA-binding protein.

Tabib-Salazar A, Liu B, Shadrin A, Burchell L, Wang Z, Wang Z, Goren MG, Yosef I, Qimron U, Severinov K, Matthews SJ, Wigneshweraraj S.

Nucleic Acids Res. 2017 Jul 27;45(13):7697-7707. doi: 10.1093/nar/gkx370.

10.

Facet-Dependent Interactions of Islet Amyloid Polypeptide with Gold Nanoparticles: Implications for Fibril Formation and Peptide-Induced Lipid Membrane Disruption.

Wang ST, Lin Y, Todorova N, Xu Y, Mazo M, Rana S, Leonardo V, Amdursky N, Spicer CD, Alexander BD, Edwards AA, Matthews SJ, Yarovsky I, Stevens MM.

Chem Mater. 2017 Feb 28;29(4):1550-1560. doi: 10.1021/acs.chemmater.6b04144. Epub 2017 Feb 13.

11.

Structural insights into functional amyloid inhibition in Gram -ve bacteria.

Hawthorne W, Rouse S, Sewell L, Matthews SJ.

Biochem Soc Trans. 2016 Dec 15;44(6):1643-1649. Review.

12.

PARP3 is a sensor of nicked nucleosomes and monoribosylates histone H2B(Glu2).

Grundy GJ, Polo LM, Zeng Z, Rulten SL, Hoch NC, Paomephan P, Xu Y, Sweet SM, Thorne AW, Oliver AW, Matthews SJ, Pearl LH, Caldecott KW.

Nat Commun. 2016 Aug 17;7:12404. doi: 10.1038/ncomms12404.

13.

A Comparative Structure/Function Analysis of Two Type IV Pilin DNA Receptors Defines a Novel Mode of DNA Binding.

Berry JL, Xu Y, Ward PN, Lea SM, Matthews SJ, Pelicic V.

Structure. 2016 Jun 7;24(6):926-34. doi: 10.1016/j.str.2016.04.001. Epub 2016 May 5.

14.

Electrostatically-guided inhibition of Curli amyloid nucleation by the CsgC-like family of chaperones.

Taylor JD, Hawthorne WJ, Lo J, Dear A, Jain N, Meisl G, Andreasen M, Fletcher C, Koch M, Darvill N, Scull N, Escalera-Maurer A, Sefer L, Wenman R, Lambert S, Jean J, Xu Y, Turner B, Kazarian SG, Chapman MR, Bubeck D, de Simone A, Knowles TP, Matthews SJ.

Sci Rep. 2016 Apr 21;6:24656. doi: 10.1038/srep24656.

15.

Correction: A Conserved Interaction between a C-Terminal Motif in Norovirus VPg and the HEAT-1 Domain of eIF4G Is Essential for Translation Initiation.

Leen EN, Sorgeloos F, Correia S, Chaudhry Y, Cannac F, Pastore C, Xu Y, Graham SC, Matthews SJ, Goodfellow IG, Curry S.

PLoS Pathog. 2016 Mar 11;12(3):e1005509. doi: 10.1371/journal.ppat.1005509. eCollection 2016 Mar. No abstract available.

16.

Structures of the DfsB Protein Family Suggest a Cationic, Helical Sibling Lethal Factor Peptide.

Taylor JD, Taylor G, Hare SA, Matthews SJ.

J Mol Biol. 2016 Feb 13;428(3):554-560. doi: 10.1016/j.jmb.2016.01.013. Epub 2016 Jan 21.

17.

A Conserved Interaction between a C-Terminal Motif in Norovirus VPg and the HEAT-1 Domain of eIF4G Is Essential for Translation Initiation.

Leen EN, Sorgeloos F, Correia S, Chaudhry Y, Cannac F, Pastore C, Xu Y, Graham SC, Matthews SJ, Goodfellow IG, Curry S.

PLoS Pathog. 2016 Jan 6;12(1):e1005379. doi: 10.1371/journal.ppat.1005379. eCollection 2016 Jan. Erratum in: PLoS Pathog. 2016 Mar;12(3):e1005509.

18.

Structural analysis of haemoglobin binding by HpuA from the Neisseriaceae family.

Wong CT, Xu Y, Gupta A, Garnett JA, Matthews SJ, Hare SA.

Nat Commun. 2015 Dec 16;6:10172. doi: 10.1038/ncomms10172.

19.

Structural Insight into Archaic and Alternative Chaperone-Usher Pathways Reveals a Novel Mechanism of Pilus Biogenesis.

Pakharukova N, Garnett JA, Tuittila M, Paavilainen S, Diallo M, Xu Y, Matthews SJ, Zavialov AV.

PLoS Pathog. 2015 Nov 20;11(11):e1005269. doi: 10.1371/journal.ppat.1005269. eCollection 2015 Nov.

20.

Heterogeneous Compression of Large Collections of Evolutionary Trees.

Matthews SJ.

IEEE/ACM Trans Comput Biol Bioinform. 2015 Jul-Aug;12(4):807-14. doi: 10.1109/TCBB.2014.2366756.

PMID:
26357320
21.

Purification, crystallization and preliminary X-ray diffraction analysis of the Escherichia coli common pilus chaperone EcpB.

Garnett JA, Diallo M, Matthews SJ.

Acta Crystallogr F Struct Biol Commun. 2015 Jun;71(Pt 6):676-9. doi: 10.1107/S2053230X15006354. Epub 2015 May 20.

22.

New insight into the molecular control of bacterial functional amyloids.

Taylor JD, Matthews SJ.

Front Cell Infect Microbiol. 2015 Apr 8;5:33. doi: 10.3389/fcimb.2015.00033. eCollection 2015. Review.

23.

The bacterial curli system possesses a potent and selective inhibitor of amyloid formation.

Evans ML, Chorell E, Taylor JD, Åden J, Götheson A, Li F, Koch M, Sefer L, Matthews SJ, Wittung-Stafshede P, Almqvist F, Chapman MR.

Mol Cell. 2015 Feb 5;57(3):445-55. doi: 10.1016/j.molcel.2014.12.025. Epub 2015 Jan 22.

24.

The Escherichia coli effector EspJ blocks Src kinase activity via amidation and ADP ribosylation.

Young JC, Clements A, Lang AE, Garnett JA, Munera D, Arbeloa A, Pearson J, Hartland EL, Matthews SJ, Mousnier A, Barry DJ, Way M, Schlosser A, Aktories K, Frankel G.

Nat Commun. 2014 Dec 19;5:5887. doi: 10.1038/ncomms6887.

25.

Structural basis of Toxoplasma gondii MIC2-associated protein interaction with MIC2.

Huynh MH, Liu B, Henry M, Liew L, Matthews SJ, Carruthers VB.

J Biol Chem. 2015 Jan 16;290(3):1432-41. doi: 10.1074/jbc.M114.613646. Epub 2014 Nov 19.

26.

Structure based modification of Bluetongue virus helicase protein VP6 to produce a viable VP6-truncated BTV.

Matsuo E, Leon E, Matthews SJ, Roy P.

Biochem Biophys Res Commun. 2014 Sep 5;451(4):603-8. doi: 10.1016/j.bbrc.2014.08.028. Epub 2014 Aug 14.

27.

A new method to determine in vivo interactomes reveals binding of the Legionella pneumophila effector PieE to multiple rab GTPases.

Mousnier A, Schroeder GN, Stoneham CA, So EC, Garnett JA, Yu L, Matthews SJ, Choudhary JS, Hartland EL, Frankel G.

MBio. 2014 Aug 12;5(4). pii: e01148-14. doi: 10.1128/mBio.01148-14.

28.

Structural insight into SUMO chain recognition and manipulation by the ubiquitin ligase RNF4.

Xu Y, Plechanovová A, Simpson P, Marchant J, Leidecker O, Kraatz S, Hay RT, Matthews SJ.

Nat Commun. 2014 Jun 27;5:4217. doi: 10.1038/ncomms5217.

29.

A reflective teaching challenge to motivate educational innovation.

Edwards RA, Kirwin J, Gonyeau M, Matthews SJ, Lancaster J, DiVall M.

Am J Pharm Educ. 2014 Jun 17;78(5):103. doi: 10.5688/ajpe785103.

30.

The peptide-binding cavity is essential for Als3-mediated adhesion of Candida albicans to human cells.

Lin J, Oh SH, Jones R, Garnett JA, Salgado PS, Rusnakova S, Matthews SJ, Hoyer LL, Cota E.

J Biol Chem. 2014 Jun 27;289(26):18401-12. doi: 10.1074/jbc.M114.547877. Epub 2014 May 6.

31.

The crystal structure of NS5A domain 1 from genotype 1a reveals new clues to the mechanism of action for dimeric HCV inhibitors.

Lambert SM, Langley DR, Garnett JA, Angell R, Hedgethorne K, Meanwell NA, Matthews SJ.

Protein Sci. 2014 Jun;23(6):723-34. doi: 10.1002/pro.2456. Epub 2014 Apr 5.

32.

Insight into the HIV-1 Vif SOCS-box-ElonginBC interaction.

Lu Z, Bergeron JR, Atkinson RA, Schaller T, Veselkov DA, Oregioni A, Yang Y, Matthews SJ, Malim MH, Sanderson MR.

Open Biol. 2013 Nov 13;3(11):130100. doi: 10.1098/rsob.130100.

33.

Unpredictable feeding impairs glucose tolerance in growing lambs.

Jaquiery AL, Oliver MH, Landon-Lane N, Matthews SJ, Harding JE, Bloomfield FH.

PLoS One. 2013 Apr 16;8(4):e61040. doi: 10.1371/journal.pone.0061040. Print 2013.

34.

The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase.

Tabib-Salazar A, Liu B, Doughty P, Lewis RA, Ghosh S, Parsy ML, Simpson PJ, O'Dwyer K, Matthews SJ, Paget MS.

Nucleic Acids Res. 2013 Jun;41(11):5679-91. doi: 10.1093/nar/gkt277. Epub 2013 Apr 19.

35.

Specific DNA recognition mediated by a type IV pilin.

Cehovin A, Simpson PJ, McDowell MA, Brown DR, Noschese R, Pallett M, Brady J, Baldwin GS, Lea SM, Matthews SJ, Pelicic V.

Proc Natl Acad Sci U S A. 2013 Feb 19;110(8):3065-70. doi: 10.1073/pnas.1218832110. Epub 2013 Feb 5.

36.

Crystal structure of human CDC7 kinase in complex with its activator DBF4.

Hughes S, Elustondo F, Di Fonzo A, Leroux FG, Wong AC, Snijders AP, Matthews SJ, Cherepanov P.

Nat Struct Mol Biol. 2012 Nov;19(11):1101-7. doi: 10.1038/nsmb.2404. Epub 2012 Oct 14.

PMID:
23064647
37.

Telaprevir: a hepatitis C NS3/4A protease inhibitor.

Matthews SJ, Lancaster JW.

Clin Ther. 2012 Sep;34(9):1857-82. doi: 10.1016/j.clinthera.2012.07.011. Epub 2012 Aug 28. Review.

PMID:
22951253
38.

Follow-up assessment of a faculty peer observation and evaluation program.

DiVall M, Barr J, Gonyeau M, Matthews SJ, Van Amburgh J, Qualters D, Trujillo J.

Am J Pharm Educ. 2012 May 10;76(4):61. doi: 10.5688/ajpe76461.

39.

Changes in protein dynamics of the DNA repair dioxygenase AlkB upon binding of Fe(2+) and 2-oxoglutarate.

Bleijlevens B, Shivarattan T, van den Boom KS, de Haan A, van der Zwan G, Simpson PJ, Matthews SJ.

Biochemistry. 2012 Apr 24;51(16):3334-41. doi: 10.1021/bi201699e. Epub 2012 Apr 9.

PMID:
22443471
40.

A Toll/interleukin (IL)-1 receptor domain protein from Yersinia pestis interacts with mammalian IL-1/Toll-like receptor pathways but does not play a central role in the virulence of Y. pestis in a mouse model of bubonic plague.

Spear AM, Rana RR, Jenner DC, Flick-Smith HC, Oyston PC, Simpson P, Matthews SJ, Byrne B, Atkins HS.

Microbiology. 2012 Jun;158(Pt 6):1593-606. doi: 10.1099/mic.0.055012-0. Epub 2012 Mar 8.

PMID:
22403187
41.

Fidaxomicin: the newest addition to the armamentarium against Clostridium difficile infections.

Lancaster JW, Matthews SJ.

Clin Ther. 2012 Jan;34(1):1-13. doi: 10.1016/j.clinthera.2011.12.003. Review.

PMID:
22284993
42.

Geofold: topology-based protein unfolding pathways capture the effects of engineered disulfides on kinetic stability.

Ramakrishnan V, Srinivasan SP, Salem SM, Matthews SJ, Colón W, Zaki M, Bystroff C.

Proteins. 2012 Mar;80(3):920-34. doi: 10.1002/prot.23249. Epub 2011 Dec 21.

43.

An efficient and extensible approach for compressing phylogenetic trees.

Matthews SJ, Williams TL.

BMC Bioinformatics. 2011 Oct 18;12 Suppl 10:S16. doi: 10.1186/1471-2105-12-S10-S16.

44.

Crystallographic analysis of polypyrimidine tract-binding protein-Raver1 interactions involved in regulation of alternative splicing.

Joshi A, Coelho MB, Kotik-Kogan O, Simpson PJ, Matthews SJ, Smith CW, Curry S.

Structure. 2011 Dec 7;19(12):1816-25. doi: 10.1016/j.str.2011.09.020.

45.

Structural basis for the broad specificity to host-cell ligands by the pathogenic fungus Candida albicans.

Salgado PS, Yan R, Taylor JD, Burchell L, Jones R, Hoyer LL, Matthews SJ, Simpson PJ, Cota E.

Proc Natl Acad Sci U S A. 2011 Sep 20;108(38):15775-9. doi: 10.1073/pnas.1103496108. Epub 2011 Sep 6.

46.

Atomic resolution insights into curli fiber biogenesis.

Taylor JD, Zhou Y, Salgado PS, Patwardhan A, McGuffie M, Pape T, Grabe G, Ashman E, Constable SC, Simpson PJ, Lee WC, Cota E, Chapman MR, Matthews SJ.

Structure. 2011 Sep 7;19(9):1307-16. doi: 10.1016/j.str.2011.05.015.

47.

Urinary tract infections in the elderly population.

Matthews SJ, Lancaster JW.

Am J Geriatr Pharmacother. 2011 Oct;9(5):286-309. doi: 10.1016/j.amjopharm.2011.07.002. Epub 2011 Aug 12. Review.

PMID:
21840265
48.

Yersinia pestis TIR-domain protein forms dimers that interact with the human adaptor protein MyD88.

Rana RR, Simpson P, Zhang M, Jennions M, Ukegbu C, Spear AM, Alguel Y, Matthews SJ, Atkins HS, Byrne B.

Microb Pathog. 2011 Sep;51(3):89-95. doi: 10.1016/j.micpath.2011.05.004. Epub 2011 May 27.

49.

Angiographic embolisation of pelvic ring injuries. Treatment algorithm and review of the literature.

Karadimas EJ, Nicolson T, Kakagia DD, Matthews SJ, Richards PJ, Giannoudis PV.

Int Orthop. 2011 Sep;35(9):1381-90. doi: 10.1007/s00264-011-1271-1. Epub 2011 May 17. Review.

50.

Enzymatic activities and functional interdependencies of Bacillus subtilis lipoteichoic acid synthesis enzymes.

Wörmann ME, Corrigan RM, Simpson PJ, Matthews SJ, Gründling A.

Mol Microbiol. 2011 Feb;79(3):566-83. doi: 10.1111/j.1365-2958.2010.07472.x. Epub 2010 Dec 7.

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