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Items: 1 to 50 of 319

1.

Protein Science best paper awards to Yu-ming Huang and Abhay Thakur.

Matthews BW.

Protein Sci. 2019 Jun;28(6):982-983. doi: 10.1002/pro.3631. No abstract available.

PMID:
31026376
2.

Protein Science best paper awards to Minfei Su and Chang-Ting Lin.

Matthews BW.

Protein Sci. 2018 May;27(5):908-909. doi: 10.1002/pro.3402. No abstract available.

3.

David Davies: Structural biologist and mentor.

Matthews BW.

Protein Sci. 2017 Apr;26(4):636-637. doi: 10.1002/pro.3130. Epub 2017 Feb 28. No abstract available.

4.

Protein Science best paper awards to Tracy Clinton and Michael Thompson.

Matthews BW.

Protein Sci. 2016 May;25(5):944-5. doi: 10.1002/pro.2925. Epub 2016 Apr 4. No abstract available.

5.

How planar are planar peptide bonds?

Matthews BW.

Protein Sci. 2016 Apr;25(4):776-7. doi: 10.1002/pro.2901. Epub 2016 Mar 1. No abstract available.

6.

Protein Science Best Paper awards to Chih-Chia (Jack) Su and Minttu Virkki.

Matthews BW.

Protein Sci. 2015 Mar;24(3):265-6. doi: 10.1002/pro.2658. No abstract available.

7.

Which of the 100,000 structures in the protein data bank are reliable?

Matthews BW.

Protein Sci. 2015 May;24(5):589-91. doi: 10.1002/pro.2662. Epub 2015 Mar 30. No abstract available.

8.

Protein science "best paper" awards to Mark Landau and Brian Ziemba.

Matthews BW.

Protein Sci. 2014 May;23(5):515-6. doi: 10.1002/pro.2447. Epub 2014 Apr 2. No abstract available.

9.

Protein Science "Best Paper" awards to Youngil Chang and Liam Longo.

Matthews BW.

Protein Sci. 2013 Jul;22(7):869. doi: 10.1002/pro.2272. No abstract available.

10.

Methods in Protein Science.

Matthews BW.

Protein Sci. 2013 Feb;22(2):iii. doi: 10.1002/pro.2219. No abstract available.

11.

The Bragg legacy: early days in macromolecular crystallography.

Matthews BW.

Acta Crystallogr A. 2013 Jan;69(Pt 1):34-6. doi: 10.1107/S0108767312042924. Epub 2012 Dec 5.

PMID:
23250058
12.

LacZ β-galactosidase: structure and function of an enzyme of historical and molecular biological importance.

Juers DH, Matthews BW, Huber RE.

Protein Sci. 2012 Dec;21(12):1792-807. doi: 10.1002/pro.2165. Epub 2012 Nov 13. Review.

13.

Proteins under pressure.

Matthews BW.

Proc Natl Acad Sci U S A. 2012 May 1;109(18):6792-3. doi: 10.1073/pnas.1204795109. Epub 2012 Apr 23. No abstract available.

14.

The role of calcium ions in the stability and instability of a thermolysin-like protease.

Eijsink VG, Matthews BW, Vriend G.

Protein Sci. 2011 Aug;20(8):1346-55. doi: 10.1002/pro.670. Epub 2011 Jul 11. Review.

15.

Stoichiometry versus hydrophobicity in protein folding.

Matthews BW.

J Biomol Struct Dyn. 2011 Feb;28(4):589-91; discussion 669-674. No abstract available.

PMID:
21142227
16.

Peripatetic proteins.

Matthews BW.

Protein Sci. 2010 Jul;19(7):1279-80. doi: 10.1002/pro.422. No abstract available.

17.

Lessons from the lysozyme of phage T4.

Baase WA, Liu L, Tronrud DE, Matthews BW.

Protein Sci. 2010 Apr;19(4):631-41. doi: 10.1002/pro.344. Review.

18.

Boron mimetics: 1,2-dihydro-1,2-azaborines bind inside a nonpolar cavity of T4 lysozyme.

Liu L, Marwitz AJ, Matthews BW, Liu SY.

Angew Chem Int Ed Engl. 2009;48(37):6817-9. doi: 10.1002/anie.200903390. No abstract available.

19.

Use of stabilizing mutations to engineer a charged group within a ligand-binding hydrophobic cavity in T4 lysozyme.

Liu L, Baase WA, Michael MM, Matthews BW.

Biochemistry. 2009 Sep 22;48(37):8842-51. doi: 10.1021/bi900685j.

PMID:
19663503
20.

Direct and indirect roles of His-418 in metal binding and in the activity of beta-galactosidase (E. coli).

Juers DH, Rob B, Dugdale ML, Rahimzadeh N, Giang C, Lee M, Matthews BW, Huber RE.

Protein Sci. 2009 Jun;18(6):1281-92. doi: 10.1002/pro.140.

21.

Racemic crystallography--easy crystals and easy structures: what's not to like?

Matthews BW.

Protein Sci. 2009 Jun;18(6):1135-8. doi: 10.1002/pro.125. No abstract available.

22.

Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme.

Mooers BH, Baase WA, Wray JW, Matthews BW.

Protein Sci. 2009 May;18(5):871-80. doi: 10.1002/pro.94.

23.
24.

A review about nothing: are apolar cavities in proteins really empty?

Matthews BW, Liu L.

Protein Sci. 2009 Mar;18(3):494-502. doi: 10.1002/pro.61. Review.

25.

Sorting the chaff from the wheat at the PDB.

Tronrud DE, Matthews BW.

Protein Sci. 2009 Jan;18(1):2-5. doi: 10.1002/pro.13. No abstract available.

26.

Halogenated benzenes bound within a non-polar cavity in T4 lysozyme provide examples of I...S and I...Se halogen-bonding.

Liu L, Baase WA, Matthews BW.

J Mol Biol. 2009 Jan 16;385(2):595-605. doi: 10.1016/j.jmb.2008.10.086. Epub 2008 Nov 6.

PMID:
19014950
27.

Structural and thermodynamic characterization of T4 lysozyme mutants and the contribution of internal cavities to pressure denaturation.

Ando N, Barstow B, Baase WA, Fields A, Matthews BW, Gruner SM.

Biochemistry. 2008 Oct 21;47(42):11097-109. doi: 10.1021/bi801287m. Epub 2008 Sep 25.

28.

Use of experimental crystallographic phases to examine the hydration of polar and nonpolar cavities in T4 lysozyme.

Liu L, Quillin ML, Matthews BW.

Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14406-11. doi: 10.1073/pnas.0806307105. Epub 2008 Sep 9.

29.

Structure of the nucleocapsid-binding domain from the mumps virus polymerase; an example of protein folding induced by crystallization.

Kingston RL, Gay LS, Baase WS, Matthews BW.

J Mol Biol. 2008 Jun 13;379(4):719-31. doi: 10.1016/j.jmb.2007.12.080. Epub 2008 Jan 11.

30.

Structural basis for the unusual specificity of Escherichia coli aminopeptidase N.

Addlagatta A, Gay L, Matthews BW.

Biochemistry. 2008 May 13;47(19):5303-11. doi: 10.1021/bi7022333. Epub 2008 Apr 17.

PMID:
18416562
31.

Changes to crystals of Escherichia coli beta-galactosidase during room-temperature/low-temperature cycling and their relation to cryo-annealing.

Juers DH, Lovelace J, Bellamy HD, Snell EH, Matthews BW, Borgstahl GE.

Acta Crystallogr D Biol Crystallogr. 2007 Nov;63(Pt 11):1139-53. Epub 2007 Oct 17.

PMID:
18007029
32.

Protein Structure Initiative: getting into gear.

Matthews BW.

Nat Struct Mol Biol. 2007 Jun;14(6):459-60.

PMID:
17549078
33.

Five retracted structure reports: inverted or incorrect?

Matthews BW.

Protein Sci. 2007 Jun;16(6):1013-6. Epub 2007 May 1. No abstract available.

34.

Structural rigidity of a large cavity-containing protein revealed by high-pressure crystallography.

Collins MD, Quillin ML, Hummer G, Matthews BW, Gruner SM.

J Mol Biol. 2007 Mar 30;367(3):752-63. Epub 2006 Dec 15.

35.

Determination of solvent content in cavities in IL-1beta using experimentally phased electron density.

Quillin ML, Wingfield PT, Matthews BW.

Proc Natl Acad Sci U S A. 2006 Dec 26;103(52):19749-53. Epub 2006 Dec 18.

36.

Elucidation of the function of type 1 human methionine aminopeptidase during cell cycle progression.

Hu X, Addlagatta A, Lu J, Matthews BW, Liu JO.

Proc Natl Acad Sci U S A. 2006 Nov 28;103(48):18148-53. Epub 2006 Nov 17.

37.

Structure of aminopeptidase N from Escherichia coli suggests a compartmentalized, gated active site.

Addlagatta A, Gay L, Matthews BW.

Proc Natl Acad Sci U S A. 2006 Sep 5;103(36):13339-44. Epub 2006 Aug 28.

38.
39.

Identification of pyridinylpyrimidines as inhibitors of human methionine aminopeptidases.

Hu X, Addlagatta A, Matthews BW, Liu JO.

Angew Chem Int Ed Engl. 2006 Jun 2;45(23):3772-5. No abstract available.

PMID:
16724298
40.

Guanidinium derivatives bind preferentially and trigger long-distance conformational changes in an engineered T4 lysozyme.

Yousef MS, Bischoff N, Dyer CM, Baase WA, Matthews BW.

Protein Sci. 2006 Apr;15(4):853-61.

41.

Sequential reorganization of beta-sheet topology by insertion of a single strand.

Sagermann M, Baase WA, Matthews BW.

Protein Sci. 2006 May;15(5):1085-92. Epub 2006 Apr 5.

42.

Co-repressor induced order and biotin repressor dimerization: a case for divergent followed by convergent evolution.

Wood ZA, Weaver LH, Brown PH, Beckett D, Matthews BW.

J Mol Biol. 2006 Mar 24;357(2):509-23. Epub 2006 Jan 6.

PMID:
16438984
43.

Extension to 2268 atoms of direct methods in the ab initio determination of the unknown structure of bacteriophage P22 lysozyme.

Mooers BH, Matthews BW.

Acta Crystallogr D Biol Crystallogr. 2006 Feb;62(Pt 2):165-76. Epub 2006 Jan 18.

PMID:
16421448
44.

Structural analysis of silanediols as transition-state-analogue inhibitors of the benchmark metalloprotease thermolysin.

Juers DH, Kim J, Matthews BW, Sieburth SM.

Biochemistry. 2005 Dec 20;44(50):16524-8.

PMID:
16342943
45.

Structural basis for the functional differences between type I and type II human methionine aminopeptidases.

Addlagatta A, Hu X, Liu JO, Matthews BW.

Biochemistry. 2005 Nov 15;44(45):14741-9.

PMID:
16274222
46.

Cooperative water filling of a nonpolar protein cavity observed by high-pressure crystallography and simulation.

Collins MD, Hummer G, Quillin ML, Matthews BW, Gruner SM.

Proc Natl Acad Sci U S A. 2005 Nov 15;102(46):16668-71. Epub 2005 Nov 3. Erratum in: Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4793.

47.

Dynamics of xenon binding inside the hydrophobic cavity of pseudo-wild-type bacteriophage T4 lysozyme explored through xenon-based NMR spectroscopy.

Desvaux H, Dubois L, Huber G, Quillin ML, Berthault P, Matthews BW.

J Am Chem Soc. 2005 Aug 24;127(33):11676-83.

PMID:
16104744
48.

Cryo-cooling in macromolecular crystallography: advantages, disadvantages and optimization.

Juers DH, Matthews BW.

Q Rev Biophys. 2004 May;37(2):105-19. Review.

PMID:
15999418
49.

The structure of E. coli beta-galactosidase.

Matthews BW.

C R Biol. 2005 Jun;328(6):549-56. Review.

PMID:
15950161
50.

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