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Items: 22

1.

Ticket to spawn: Combining economic and genetic data to evaluate the effect of climate and demographic structure on spawning distribution in Atlantic cod.

Langangen Ø, Färber L, Stige LC, Diekert FK, Barth JMI, Matschiner M, Berg PR, Star B, Stenseth NC, Jentoft S, Durant JM.

Glob Chang Biol. 2018 Oct 9. doi: 10.1111/gcb.14474. [Epub ahead of print]

PMID:
30300937
2.

The Most Developmentally Truncated Fishes Show Extensive Hox Gene Loss and Miniaturized Genomes.

Malmstrøm M, Britz R, Matschiner M, Tørresen OK, Hadiaty RK, Yaakob N, Tan HH, Jakobsen KS, Salzburger W, Rüber L.

Genome Biol Evol. 2018 Apr 1;10(4):1088-1103. doi: 10.1093/gbe/evy058.

3.

Bayesian Divergence-Time Estimation with Genome-Wide Single-Nucleotide Polymorphism Data of Sea Catfishes (Ariidae) Supports Miocene Closure of the Panamanian Isthmus.

Stange M, Sánchez-Villagra MR, Salzburger W, Matschiner M.

Syst Biol. 2018 Jul 1;67(4):681-699. doi: 10.1093/sysbio/syy006.

4.

Variation and constraints in hybrid genome formation.

Runemark A, Trier CN, Eroukhmanoff F, Hermansen JS, Matschiner M, Ravinet M, Elgvin TO, Sætre GP.

Nat Ecol Evol. 2018 Mar;2(3):549-556. doi: 10.1038/s41559-017-0437-7. Epub 2018 Jan 15.

PMID:
29335572
5.

Evolution of Hemoglobin Genes in Codfishes Influenced by Ocean Depth.

Baalsrud HT, Voje KL, Tørresen OK, Solbakken MH, Matschiner M, Malmstrøm M, Hanel R, Salzburger W, Jakobsen KS, Jentoft S.

Sci Rep. 2017 Aug 11;7(1):7956. doi: 10.1038/s41598-017-08286-2.

6.

Millions of Years Behind: Slow Adaptation of Ruminants to Grasslands.

Toljagic O, Voje KL, Matschiner M, Liow LH, Hansen TF.

Syst Biol. 2018 Jan 1;67(1):145-157. doi: 10.1093/sysbio/syx059. Erratum in: Syst Biol. 2017 Nov 1;66(6):1065.

PMID:
28637223
7.

Genomic differentiation and demographic histories of Atlantic and Indo-Pacific yellowfin tuna (Thunnus albacares) populations.

Barth JMI, Damerau M, Matschiner M, Jentoft S, Hanel R.

Genome Biol Evol. 2017 Apr 13. doi: 10.1093/gbe/evx067. [Epub ahead of print]

8.

Bayesian Phylogenetic Estimation of Clade Ages Supports Trans-Atlantic Dispersal of Cichlid Fishes.

Matschiner M, Musilová Z, Barth JM, Starostová Z, Salzburger W, Steel M, Bouckaert R.

Syst Biol. 2017 Jan 1;66(1):3-22. doi: 10.1093/sysbio/syw076.

PMID:
28173588
9.

Whole genome sequencing data and de novo draft assemblies for 66 teleost species.

Malmstrøm M, Matschiner M, Tørresen OK, Jakobsen KS, Jentoft S.

Sci Data. 2017 Jan 17;4:160132. doi: 10.1038/sdata.2016.132.

10.

Evolution of the immune system influences speciation rates in teleost fishes.

Malmstrøm M, Matschiner M, Tørresen OK, Star B, Snipen LG, Hansen TF, Baalsrud HT, Nederbragt AJ, Hanel R, Salzburger W, Stenseth NC, Jakobsen KS, Jentoft S.

Nat Genet. 2016 Oct;48(10):1204-10. doi: 10.1038/ng.3645. Epub 2016 Aug 22.

PMID:
27548311
11.

Disentangling Incomplete Lineage Sorting and Introgression to Refine Species-Tree Estimates for Lake Tanganyika Cichlid Fishes.

Meyer BS, Matschiner M, Salzburger W.

Syst Biol. 2017 Jul 1;66(4):531-550. doi: 10.1093/sysbio/syw069.

PMID:
27539485
12.

Genomics of speciation and introgression in Princess cichlid fishes from Lake Tanganyika.

Gante HF, Matschiner M, Malmstrøm M, Jakobsen KS, Jentoft S, Salzburger W.

Mol Ecol. 2016 Dec;25(24):6143-6161. doi: 10.1111/mec.13767. Epub 2016 Aug 26.

PMID:
27452499
13.

Fitchi: haplotype genealogy graphs based on the Fitch algorithm.

Matschiner M.

Bioinformatics. 2016 Apr 15;32(8):1250-2. doi: 10.1093/bioinformatics/btv717. Epub 2015 Dec 9.

PMID:
26656006
14.

Diversity and disparity through time in the adaptive radiation of Antarctic notothenioid fishes.

Colombo M, Damerau M, Hanel R, Salzburger W, Matschiner M.

J Evol Biol. 2015 Feb;28(2):376-94. doi: 10.1111/jeb.12570. Epub 2015 Jan 30.

15.

A tribal level phylogeny of Lake Tanganyika cichlid fishes based on a genomic multi-marker approach.

Meyer BS, Matschiner M, Salzburger W.

Mol Phylogenet Evol. 2015 Feb;83:56-71. doi: 10.1016/j.ympev.2014.10.009. Epub 2014 Nov 26.

16.

Population divergences despite long pelagic larval stages: lessons from crocodile icefishes (Channichthyidae).

Damerau M, Matschiner M, Salzburger W, Hanel R.

Mol Ecol. 2014 Feb;23(2):284-99. doi: 10.1111/mec.12612. Epub 2013 Dec 28.

PMID:
24372945
17.

Phylogenetic position and subspecies divergence of the endangered New Zealand Dotterel (Charadrius obscurus).

Barth JM, Matschiner M, Robertson BC.

PLoS One. 2013 Oct 25;8(10):e78068. doi: 10.1371/journal.pone.0078068. eCollection 2013.

18.

Fish migrate underground: the example of Delminichthys adspersus (Cyprinidae).

Palandačić A, Matschiner M, Zupančič P, Snoj A.

Mol Ecol. 2012 Apr;21(7):1658-71. doi: 10.1111/j.1365-294X.2012.05507.x. Epub 2012 Feb 28.

PMID:
22369427
19.

Parallel ecological diversification in Antarctic notothenioid fishes as evidence for adaptive radiation.

Rutschmann S, Matschiner M, Damerau M, Muschick M, Lehmann MF, Hanel R, Salzburger W.

Mol Ecol. 2011 Nov;20(22):4707-21. doi: 10.1111/j.1365-294X.2011.05279.x. Epub 2011 Sep 27.

PMID:
21951675
20.

On the origin and trigger of the notothenioid adaptive radiation.

Matschiner M, Hanel R, Salzburger W.

PLoS One. 2011 Apr 18;6(4):e18911. doi: 10.1371/journal.pone.0018911.

21.

Gene flow by larval dispersal in the Antarctic notothenioid fish Gobionotothen gibberifrons.

Matschiner M, Hanel R, Salzburger W.

Mol Ecol. 2009 Jun;18(12):2574-87. doi: 10.1111/j.1365-294X.2009.04220.x. Epub 2009 May 13.

PMID:
19457182
22.

TANDEM: integrating automated allele binning into genetics and genomics workflows.

Matschiner M, Salzburger W.

Bioinformatics. 2009 Aug 1;25(15):1982-3. doi: 10.1093/bioinformatics/btp303. Epub 2009 May 6.

PMID:
19420055

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