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Items: 41

1.

Structural Basis of CO₂ Adsorption in a Flexible Metal-Organic Framework Material.

Allen AJ, Wong-Ng W, Cockayne E, Culp JT, Matranga C.

Nanomaterials (Basel). 2019 Mar 4;9(3). pii: E354. doi: 10.3390/nano9030354.

2.

Capturing sequence diversity in metagenomes with comprehensive and scalable probe design.

Metsky HC, Siddle KJ, Gladden-Young A, Qu J, Yang DK, Brehio P, Goldfarb A, Piantadosi A, Wohl S, Carter A, Lin AE, Barnes KG, Tully DC, Corleis B, Hennigan S, Barbosa-Lima G, Vieira YR, Paul LM, Tan AL, Garcia KF, Parham LA, Odia I, Eromon P, Folarin OA, Goba A; Viral Hemorrhagic Fever Consortium, Simon-Lorière E, Hensley L, Balmaseda A, Harris E, Kwon DS, Allen TM, Runstadler JA, Smole S, Bozza FA, Souza TML, Isern S, Michael SF, Lorenzana I, Gehrke L, Bosch I, Ebel G, Grant DS, Happi CT, Park DJ, Gnirke A, Sabeti PC, Matranga CB.

Nat Biotechnol. 2019 Feb;37(2):160-168. doi: 10.1038/s41587-018-0006-x. Epub 2019 Feb 4.

3.

Chikungunya Arthritis Mechanisms in the Americas: A Cross-Sectional Analysis of Chikungunya Arthritis Patients Twenty-Two Months After Infection Demonstrating No Detectable Viral Persistence in Synovial Fluid.

Chang AY, Martins KAO, Encinales L, Reid SP, Acuña M, Encinales C, Matranga CB, Pacheco N, Cure C, Shukla B, Ruiz Arteta T, Amdur R, Cazares LH, Gregory M, Ward MD, Porras A, Rico Mendoza A, Dong L, Kenny T, Brueggemann E, Downey LG, Kamalapathy P, Lichtenberger P, Falls O, Simon GL, Bethony JM, Firestein GS.

Arthritis Rheumatol. 2018 Apr;70(4):585-593. doi: 10.1002/art.40383. Epub 2018 Mar 7.

4.

Rapid Detection of Powassan Virus in a Patient With Encephalitis by Metagenomic Sequencing.

Piantadosi A, Kanjilal S, Ganesh V, Khanna A, Hyle EP, Rosand J, Bold T, Metsky HC, Lemieux J, Leone MJ, Freimark L, Matranga CB, Adams G, McGrath G, Zamirpour S, Telford S 3rd, Rosenberg E, Cho T, Frosch MP, Goldberg MB, Mukerji SS, Sabeti PC.

Clin Infect Dis. 2018 Feb 10;66(5):789-792. doi: 10.1093/cid/cix792.

5.

Evidence of Ebola Virus Replication and High Concentration in Semen of a Patient During Recovery.

Barnes KG, Kindrachuk J, Lin AE, Wohl S, Qu J, Tostenson SD, Dorman WR, Busby M, Siddle KJ, Luo CY, Matranga CB, Davey RT, Sabeti PC, Chertow DS.

Clin Infect Dis. 2017 Oct 15;65(8):1400-1403. doi: 10.1093/cid/cix518.

6.

Zika virus evolution and spread in the Americas.

Metsky HC, Matranga CB, Wohl S, Schaffner SF, Freije CA, Winnicki SM, West K, Qu J, Baniecki ML, Gladden-Young A, Lin AE, Tomkins-Tinch CH, Ye SH, Park DJ, Luo CY, Barnes KG, Shah RR, Chak B, Barbosa-Lima G, Delatorre E, Vieira YR, Paul LM, Tan AL, Barcellona CM, Porcelli MC, Vasquez C, Cannons AC, Cone MR, Hogan KN, Kopp EW, Anzinger JJ, Garcia KF, Parham LA, Ramírez RMG, Montoya MCM, Rojas DP, Brown CM, Hennigan S, Sabina B, Scotland S, Gangavarapu K, Grubaugh ND, Oliveira G, Robles-Sikisaka R, Rambaut A, Gehrke L, Smole S, Halloran ME, Villar L, Mattar S, Lorenzana I, Cerbino-Neto J, Valim C, Degrave W, Bozza PT, Gnirke A, Andersen KG, Isern S, Michael SF, Bozza FA, Souza TML, Bosch I, Yozwiak NL, MacInnis BL, Sabeti PC.

Nature. 2017 Jun 15;546(7658):411-415. doi: 10.1038/nature22402. Epub 2017 May 24.

7.

Genomic epidemiology reveals multiple introductions of Zika virus into the United States.

Grubaugh ND, Ladner JT, Kraemer MUG, Dudas G, Tan AL, Gangavarapu K, Wiley MR, White S, Thézé J, Magnani DM, Prieto K, Reyes D, Bingham AM, Paul LM, Robles-Sikisaka R, Oliveira G, Pronty D, Barcellona CM, Metsky HC, Baniecki ML, Barnes KG, Chak B, Freije CA, Gladden-Young A, Gnirke A, Luo C, MacInnis B, Matranga CB, Park DJ, Qu J, Schaffner SF, Tomkins-Tinch C, West KL, Winnicki SM, Wohl S, Yozwiak NL, Quick J, Fauver JR, Khan K, Brent SE, Reiner RC Jr, Lichtenberger PN, Ricciardi MJ, Bailey VK, Watkins DI, Cone MR, Kopp EW 4th, Hogan KN, Cannons AC, Jean R, Monaghan AJ, Garry RF, Loman NJ, Faria NR, Porcelli MC, Vasquez C, Nagle ER, Cummings DAT, Stanek D, Rambaut A, Sanchez-Lockhart M, Sabeti PC, Gillis LD, Michael SF, Bedford T, Pybus OG, Isern S, Palacios G, Andersen KG.

Nature. 2017 Jun 15;546(7658):401-405. doi: 10.1038/nature22400. Epub 2017 May 24.

8.

Virus genomes reveal factors that spread and sustained the Ebola epidemic.

Dudas G, Carvalho LM, Bedford T, Tatem AJ, Baele G, Faria NR, Park DJ, Ladner JT, Arias A, Asogun D, Bielejec F, Caddy SL, Cotten M, D'Ambrozio J, Dellicour S, Di Caro A, Diclaro JW, Duraffour S, Elmore MJ, Fakoli LS, Faye O, Gilbert ML, Gevao SM, Gire S, Gladden-Young A, Gnirke A, Goba A, Grant DS, Haagmans BL, Hiscox JA, Jah U, Kugelman JR, Liu D, Lu J, Malboeuf CM, Mate S, Matthews DA, Matranga CB, Meredith LW, Qu J, Quick J, Pas SD, Phan MVT, Pollakis G, Reusken CB, Sanchez-Lockhart M, Schaffner SF, Schieffelin JS, Sealfon RS, Simon-Loriere E, Smits SL, Stoecker K, Thorne L, Tobin EA, Vandi MA, Watson SJ, West K, Whitmer S, Wiley MR, Winnicki SM, Wohl S, Wölfel R, Yozwiak NL, Andersen KG, Blyden SO, Bolay F, Carroll MW, Dahn B, Diallo B, Formenty P, Fraser C, Gao GF, Garry RF, Goodfellow I, Günther S, Happi CT, Holmes EC, Kargbo B, Keïta S, Kellam P, Koopmans MPG, Kuhn JH, Loman NJ, Magassouba N, Naidoo D, Nichol ST, Nyenswah T, Palacios G, Pybus OG, Sabeti PC, Sall A, Ströher U, Wurie I, Suchard MA, Lemey P, Rambaut A.

Nature. 2017 Apr 20;544(7650):309-315. doi: 10.1038/nature22040. Epub 2017 Apr 12.

9.

Unbiased Deep Sequencing of RNA Viruses from Clinical Samples.

Matranga CB, Gladden-Young A, Qu J, Winnicki S, Nosamiefan D, Levin JZ, Sabeti PC.

J Vis Exp. 2016 Jul 2;(113). doi: 10.3791/54117.

10.

Ebola Virus Epidemiology and Evolution in Nigeria.

Folarin OA, Ehichioya D, Schaffner SF, Winnicki SM, Wohl S, Eromon P, West KL, Gladden-Young A, Oyejide NE, Matranga CB, Deme AB, James A, Tomkins-Tinch C, Onyewurunwa K, Ladner JT, Palacios G, Nosamiefan I, Andersen KG, Omilabu S, Park DJ, Yozwiak NL, Nasidi A, Garry RF, Tomori O, Sabeti PC, Happi CT.

J Infect Dis. 2016 Oct 15;214(suppl 3):S102-S109. Epub 2016 Jul 4.

11.

Active sites of ligand-protected Au25 nanoparticle catalysts for CO2 electroreduction to CO.

Alfonso DR, Kauffman D, Matranga C.

J Chem Phys. 2016 May 14;144(18):184705. doi: 10.1063/1.4948792.

PMID:
27179498
12.

Clinical Sequencing Uncovers Origins and Evolution of Lassa Virus.

Andersen KG, Shapiro BJ, Matranga CB, Sealfon R, Lin AE, Moses LM, Folarin OA, Goba A, Odia I, Ehiane PE, Momoh M, England EM, Winnicki S, Branco LM, Gire SK, Phelan E, Tariyal R, Tewhey R, Omoniwa O, Fullah M, Fonnie R, Fonnie M, Kanneh L, Jalloh S, Gbakie M, Saffa S, Karbo K, Gladden AD, Qu J, Stremlau M, Nekoui M, Finucane HK, Tabrizi S, Vitti JJ, Birren B, Fitzgerald M, McCowan C, Ireland A, Berlin AM, Bochicchio J, Tazon-Vega B, Lennon NJ, Ryan EM, Bjornson Z, Milner DA Jr, Lukens AK, Broodie N, Rowland M, Heinrich M, Akdag M, Schieffelin JS, Levy D, Akpan H, Bausch DG, Rubins K, McCormick JB, Lander ES, Günther S, Hensley L, Okogbenin S; Viral Hemorrhagic Fever Consortium, Schaffner SF, Okokhere PO, Khan SH, Grant DS, Akpede GO, Asogun DA, Gnirke A, Levin JZ, Happi CT, Garry RF, Sabeti PC.

Cell. 2015 Aug 13;162(4):738-50. doi: 10.1016/j.cell.2015.07.020.

13.

Efficient electrochemical CO2 conversion powered by renewable energy.

Kauffman DR, Thakkar J, Siva R, Matranga C, Ohodnicki PR, Zeng C, Jin R.

ACS Appl Mater Interfaces. 2015 Jul 22;7(28):15626-32. doi: 10.1021/acsami.5b04393. Epub 2015 Jul 10.

PMID:
26121278
14.

Distinct lineages of Ebola virus in Guinea during the 2014 West African epidemic.

Simon-Loriere E, Faye O, Faye O, Koivogui L, Magassouba N, Keita S, Thiberge JM, Diancourt L, Bouchier C, Vandenbogaert M, Caro V, Fall G, Buchmann JP, Matranga CB, Sabeti PC, Manuguerra JC, Holmes EC, Sall AA.

Nature. 2015 Aug 6;524(7563):102-4. doi: 10.1038/nature14612. Epub 2015 Jun 24.

PMID:
26106863
15.

Ebola Virus Epidemiology, Transmission, and Evolution during Seven Months in Sierra Leone.

Park DJ, Dudas G, Wohl S, Goba A, Whitmer SL, Andersen KG, Sealfon RS, Ladner JT, Kugelman JR, Matranga CB, Winnicki SM, Qu J, Gire SK, Gladden-Young A, Jalloh S, Nosamiefan D, Yozwiak NL, Moses LM, Jiang PP, Lin AE, Schaffner SF, Bird B, Towner J, Mamoh M, Gbakie M, Kanneh L, Kargbo D, Massally JL, Kamara FK, Konuwa E, Sellu J, Jalloh AA, Mustapha I, Foday M, Yillah M, Erickson BR, Sealy T, Blau D, Paddock C, Brault A, Amman B, Basile J, Bearden S, Belser J, Bergeron E, Campbell S, Chakrabarti A, Dodd K, Flint M, Gibbons A, Goodman C, Klena J, McMullan L, Morgan L, Russell B, Salzer J, Sanchez A, Wang D, Jungreis I, Tomkins-Tinch C, Kislyuk A, Lin MF, Chapman S, MacInnis B, Matthews A, Bochicchio J, Hensley LE, Kuhn JH, Nusbaum C, Schieffelin JS, Birren BW, Forget M, Nichol ST, Palacios GF, Ndiaye D, Happi C, Gevao SM, Vandi MA, Kargbo B, Holmes EC, Bedford T, Gnirke A, Ströher U, Rambaut A, Garry RF, Sabeti PC.

Cell. 2015 Jun 18;161(7):1516-26. doi: 10.1016/j.cell.2015.06.007.

16.

Discovery of novel rhabdoviruses in the blood of healthy individuals from West Africa.

Stremlau MH, Andersen KG, Folarin OA, Grove JN, Odia I, Ehiane PE, Omoniwa O, Omoregie O, Jiang PP, Yozwiak NL, Matranga CB, Yang X, Gire SK, Winnicki S, Tariyal R, Schaffner SF, Okokhere PO, Okogbenin S, Akpede GO, Asogun DA, Agbonlahor DE, Walker PJ, Tesh RB, Levin JZ, Garry RF, Sabeti PC, Happi CT.

PLoS Negl Trop Dis. 2015 Mar 17;9(3):e0003631. doi: 10.1371/journal.pntd.0003631. eCollection 2015 Mar.

17.

Enhanced methods for unbiased deep sequencing of Lassa and Ebola RNA viruses from clinical and biological samples.

Matranga CB, Andersen KG, Winnicki S, Busby M, Gladden AD, Tewhey R, Stremlau M, Berlin A, Gire SK, England E, Moses LM, Mikkelsen TS, Odia I, Ehiane PE, Folarin O, Goba A, Kahn SH, Grant DS, Honko A, Hensley L, Happi C, Garry RF, Malboeuf CM, Birren BW, Gnirke A, Levin JZ, Sabeti PC.

Genome Biol. 2014;15(11):519.

18.

Genomic surveillance elucidates Ebola virus origin and transmission during the 2014 outbreak.

Gire SK, Goba A, Andersen KG, Sealfon RS, Park DJ, Kanneh L, Jalloh S, Momoh M, Fullah M, Dudas G, Wohl S, Moses LM, Yozwiak NL, Winnicki S, Matranga CB, Malboeuf CM, Qu J, Gladden AD, Schaffner SF, Yang X, Jiang PP, Nekoui M, Colubri A, Coomber MR, Fonnie M, Moigboi A, Gbakie M, Kamara FK, Tucker V, Konuwa E, Saffa S, Sellu J, Jalloh AA, Kovoma A, Koninga J, Mustapha I, Kargbo K, Foday M, Yillah M, Kanneh F, Robert W, Massally JL, Chapman SB, Bochicchio J, Murphy C, Nusbaum C, Young S, Birren BW, Grant DS, Scheiffelin JS, Lander ES, Happi C, Gevao SM, Gnirke A, Rambaut A, Garry RF, Khan SH, Sabeti PC.

Science. 2014 Sep 12;345(6202):1369-72. doi: 10.1126/science.1259657. Epub 2014 Aug 28.

19.

Plasmonic nanocomposite thin film enabled fiber optic sensors for simultaneous gas and temperature sensing at extreme temperatures.

Ohodnicki PR Jr, Buric MP, Brown TD, Matranga C, Wang C, Baltrus J, Andio M.

Nanoscale. 2013 Oct 7;5(19):9030-9. doi: 10.1039/c3nr02891g. Epub 2013 Aug 16.

PMID:
23948985
20.

Visible light plasmonic heating of Au-ZnO for the catalytic reduction of CO2.

Wang C, Ranasingha O, Natesakhawat S, Ohodnicki PR Jr, Andio M, Lewis JP, Matranga C.

Nanoscale. 2013 Aug 7;5(15):6968-74. doi: 10.1039/c3nr02001k.

PMID:
23794025
21.

Screening Hofmann compounds as CO2 sorbents: nontraditional synthetic route to over 40 different pore-functionalized and flexible pillared cyanonickelates.

Culp JT, Madden C, Kauffman K, Shi F, Matranga C.

Inorg Chem. 2013 Apr 15;52(8):4205-16. doi: 10.1021/ic301893p. Epub 2013 Mar 29.

PMID:
23541249
22.

Photomediated Oxidation of Atomically Precise Au25(SC2H4Ph)18(-) Nanoclusters.

Kauffman DR, Alfonso D, Matranga C, Li G, Jin R.

J Phys Chem Lett. 2013 Jan 3;4(1):195-202. doi: 10.1021/jz302056q. Epub 2012 Dec 26.

PMID:
26291231
23.

Experimental and computational investigation of Au25 clusters and CO2: a unique interaction and enhanced electrocatalytic activity.

Kauffman DR, Alfonso D, Matranga C, Qian H, Jin R.

J Am Chem Soc. 2012 Jun 20;134(24):10237-43. doi: 10.1021/ja303259q. Epub 2012 Jun 6.

PMID:
22616945
24.

Selective adsorption of CO2 from light gas mixtures by using a structurally dynamic porous coordination polymer.

Kauffman KL, Culp JT, Allen AJ, Espinal L, Wong-Ng W, Brown TD, Goodman A, Bernardo MP, Pancoast RJ, Chirdon D, Matranga C.

Angew Chem Int Ed Engl. 2011 Nov 11;50(46):10888-92. doi: 10.1002/anie.201104130. Epub 2011 Sep 23. No abstract available.

PMID:
22002810
25.

Carbon nanotube nanoreservior for controlled release of anti-inflammatory dexamethasone.

Luo X, Matranga C, Tan S, Alba N, Cui XT.

Biomaterials. 2011 Sep;32(26):6316-23. doi: 10.1016/j.biomaterials.2011.05.020. Epub 2011 Jun 1.

26.

In situ observation of water dissociation with lattice incorporation at FeO particle edges using scanning tunneling microscopy and X-ray photoelectron spectroscopy.

Deng X, Lee J, Wang C, Matranga C, Aksoy F, Liu Z.

Langmuir. 2011 Mar 15;27(6):2146-9. doi: 10.1021/la1049716. Epub 2011 Jan 28.

PMID:
21275405
27.

Double-stranded RNA-dependent ATPase DRH-3: insight into its role in RNAsilencing in Caenorhabditis elegans.

Matranga C, Pyle AM.

J Biol Chem. 2010 Aug 13;285(33):25363-71. doi: 10.1074/jbc.M110.117010. Epub 2010 Jun 7.

28.

Permanent Trapping of CO(2) in Single-Walled Carbon Nanotubes Synthesized by the HiPco Process.

Matranga C, Bockrath B.

J Phys Chem B. 2004 May 20;108(20):6170-4. doi: 10.1021/jp0498872.

PMID:
18950097
29.

Small silencing RNAs.

Matranga C, Zamore PD.

Curr Biol. 2007 Sep 18;17(18):R789-93. No abstract available.

30.

The Drosophila RNA methyltransferase, DmHen1, modifies germline piRNAs and single-stranded siRNAs in RISC.

Horwich MD, Li C, Matranga C, Vagin V, Farley G, Wang P, Zamore PD.

Curr Biol. 2007 Jul 17;17(14):1265-72. Epub 2007 Jun 28.

31.

Hydrogen-bonded and physisorbed CO in single-walled carbon nanotube bundles.

Matranga C, Bockrath B.

J Phys Chem B. 2005 Mar 24;109(11):4853-64.

PMID:
16863139
32.

Controlled confinement and release of gases in single-walled carbon nanotube bundles.

Matranga C, Bockrath B.

J Phys Chem B. 2005 May 19;109(19):9209-15.

PMID:
16852100
33.

Hydrogen storage properties of metal nitroprussides M[Fe(CN)5NO], (M = Co, Ni).

Culp JT, Matranga C, Smith M, Bittner EW, Bockrath B.

J Phys Chem B. 2006 Apr 27;110(16):8325-8.

PMID:
16623516
34.

Raman spectroscopic investigation of gas interactions with an aligned multiwalled carbon nanotube membrane.

Matranga C, Bockrath B, Chopra N, Hinds BJ, Andrews R.

Langmuir. 2006 Jan 31;22(3):1235-40.

PMID:
16430288
35.

Passenger-strand cleavage facilitates assembly of siRNA into Ago2-containing RNAi enzyme complexes.

Matranga C, Tomari Y, Shin C, Bartel DP, Zamore PD.

Cell. 2005 Nov 18;123(4):607-20. Epub 2005 Nov 3.

36.

Plant RNA interference in vitro.

Matranga C, Zamore PD.

Cold Spring Harb Symp Quant Biol. 2004;69:403-8. No abstract available.

PMID:
16117674
37.

A protein sensor for siRNA asymmetry.

Tomari Y, Matranga C, Haley B, Martinez N, Zamore PD.

Science. 2004 Nov 19;306(5700):1377-80.

38.

Flavopiridol-induced apoptosis during S phase requires E2F-1 and inhibition of cyclin A-dependent kinase activity.

Jiang J, Matranga CB, Cai D, Latham VM Jr, Zhang X, Lowell AM, Martelli F, Shapiro GI.

Cancer Res. 2003 Nov 1;63(21):7410-22.

39.

Igniting nanotubes with a flash.

Bockrath B, Johnson JK, Sholl DS, Howard B, Matranga C, Shi W, Sorescu D.

Science. 2002 Jul 12;297(5579):192-3; author reply 192-3. No abstract available.

PMID:
12117006
40.
41.

Flavopiridol induces cell cycle arrest and p53-independent apoptosis in non-small cell lung cancer cell lines.

Shapiro GI, Koestner DA, Matranga CB, Rollins BJ.

Clin Cancer Res. 1999 Oct;5(10):2925-38.

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