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Items: 28

1.

Effect of Perioperative Opioids on Cancer-Relevant Circulating Parameters: Mu Opioid Receptor and Toll-Like Receptor 4 Activation Potential, and Proteolytic Profile.

Xie N, Matigian N, Vithanage T, Gregory K, Nassar ZD, Cabot PJ, Shaw PN, Kirkpatrick CMJ, Cao KL, Sturgess D, Parat MO.

Clin Cancer Res. 2018 May 15;24(10):2319-2327. doi: 10.1158/1078-0432.CCR-18-0172. Epub 2018 Mar 6.

PMID:
29511031
2.

Loss of Usp9x disrupts cell adhesion, and components of the Wnt and Notch signaling pathways in neural progenitors.

Premarathne S, Murtaza M, Matigian N, Jolly LA, Wood SA.

Sci Rep. 2017 Aug 14;7(1):8109. doi: 10.1038/s41598-017-05451-5.

3.

DNA methylation in schizophrenia in different patient-derived cell types.

Vitale AM, Matigian NA, Cristino AS, Nones K, Ravishankar S, Bellette B, Fan Y, Wood SA, Wolvetang E, Mackay-Sim A.

NPJ Schizophr. 2017 Jan 23;3:6. doi: 10.1038/s41537-016-0006-0. eCollection 2017.

4.

MINT: a multivariate integrative method to identify reproducible molecular signatures across independent experiments and platforms.

Rohart F, Eslami A, Matigian N, Bougeard S, Lê Cao KA.

BMC Bioinformatics. 2017 Feb 27;18(1):128. doi: 10.1186/s12859-017-1553-8.

5.

Rotenone Susceptibility Phenotype in Olfactory Derived Patient Cells as a Model of Idiopathic Parkinson's Disease.

Murtaza M, Shan J, Matigian N, Todorovic M, Cook AL, Ravishankar S, Dong LF, Neuzil J, Silburn P, Mackay-Sim A, Mellick GD, Wood SA.

PLoS One. 2016 Apr 28;11(4):e0154544. doi: 10.1371/journal.pone.0154544. eCollection 2016.

6.

A molecular classification of human mesenchymal stromal cells.

Rohart F, Mason EA, Matigian N, Mosbergen R, Korn O, Chen T, Butcher S, Patel J, Atkinson K, Khosrotehrani K, Fisk NM, Lê Cao KA, Wells CA.

PeerJ. 2016 Mar 24;4:e1845. doi: 10.7717/peerj.1845. eCollection 2016.

7.

Reduced protein synthesis in schizophrenia patient-derived olfactory cells.

English JA, Fan Y, Föcking M, Lopez LM, Hryniewiecka M, Wynne K, Dicker P, Matigian N, Cagney G, Mackay-Sim A, Cotter DR.

Transl Psychiatry. 2015 Oct 20;5:e663. doi: 10.1038/tp.2015.119.

8.

Multipotent human stromal cells isolated from cord blood, term placenta and adult bone marrow show distinct differences in gene expression pattern.

Matigian N, Brooke G, Zaibak F, Rossetti T, Kollar K, Pelekanos R, Heazlewood C, Mackay-Sim A, Wells CA, Atkinson K.

Genom Data. 2014 Nov 28;3:70-4. doi: 10.1016/j.gdata.2014.11.011. eCollection 2015 Mar.

9.

Transcriptional ontogeny of first trimester human fetal and placental mesenchymal stem cells: Gestational age versus niche.

Ryan JM, Matigian N, Pelekanos RA, Jesuadian S, Wells CA, Fisk NM.

Genom Data. 2014 Oct 25;2:382-5. doi: 10.1016/j.gdata.2014.10.016. eCollection 2014 Dec.

10.

A patient-derived stem cell model of hereditary spastic paraplegia with SPAST mutations.

Abrahamsen G, Fan Y, Matigian N, Wali G, Bellette B, Sutharsan R, Raju J, Wood SA, Veivers D, Sue CM, Mackay-Sim A.

Dis Model Mech. 2015 Oct 1;8(10):1339. doi: 10.1242/dmm.023002. No abstract available.

11.

A patient-derived olfactory stem cell disease model for ataxia-telangiectasia.

Stewart R, Kozlov S, Matigian N, Wali G, Gatei M, Sutharsan R, Bellette B, Wraith-Kijas A, Cochrane J, Coulthard M, Perry C, Sinclair K, Mackay-Sim A, Lavin MF.

Hum Mol Genet. 2013 Jun 15;22(12):2495-509. doi: 10.1093/hmg/ddt101. Epub 2013 Mar 7.

PMID:
23474819
12.

Stemformatics: visualisation and sharing of stem cell gene expression.

Wells CA, Mosbergen R, Korn O, Choi J, Seidenman N, Matigian NA, Vitale AM, Shepherd J.

Stem Cell Res. 2013 May;10(3):387-95. doi: 10.1016/j.scr.2012.12.003. Epub 2012 Dec 20.

13.

A patient-derived stem cell model of hereditary spastic paraplegia with SPAST mutations.

Abrahamsen G, Fan Y, Matigian N, Wali G, Bellette B, Sutharsan R, Raju J, Wood SA, Veivers D, Sue CM, Mackay-Sim A.

Dis Model Mech. 2013 Mar;6(2):489-502. doi: 10.1242/dmm.010884. Epub 2012 Dec 20. Erratum in: Dis Model Mech. 2015 Oct 1;8(10):1339.

14.

Variability in the generation of induced pluripotent stem cells: importance for disease modeling.

Vitale AM, Matigian NA, Ravishankar S, Bellette B, Wood SA, Wolvetang EJ, Mackay-Sim A.

Stem Cells Transl Med. 2012 Sep;1(9):641-50. doi: 10.5966/sctm.2012-0043. Epub 2012 Sep 7.

15.

MicroRNAs and their isomiRs function cooperatively to target common biological pathways.

Cloonan N, Wani S, Xu Q, Gu J, Lea K, Heater S, Barbacioru C, Steptoe AL, Martin HC, Nourbakhsh E, Krishnan K, Gardiner B, Wang X, Nones K, Steen JA, Matigian NA, Wood DL, Kassahn KS, Waddell N, Shepherd J, Lee C, Ichikawa J, McKernan K, Bramlett K, Kuersten S, Grimmond SM.

Genome Biol. 2011 Dec 30;12(12):R126. doi: 10.1186/gb-2011-12-12-r126.

16.

attract: A method for identifying core pathways that define cellular phenotypes.

Mar JC, Matigian NA, Quackenbush J, Wells CA.

PLoS One. 2011;6(10):e25445. doi: 10.1371/journal.pone.0025445. Epub 2011 Oct 14.

17.

Variance of gene expression identifies altered network constraints in neurological disease.

Mar JC, Matigian NA, Mackay-Sim A, Mellick GD, Sue CM, Silburn PA, McGrath JJ, Quackenbush J, Wells CA.

PLoS Genet. 2011 Aug;7(8):e1002207. doi: 10.1371/journal.pgen.1002207. Epub 2011 Aug 11.

18.

NRF2 activation restores disease related metabolic deficiencies in olfactory neurosphere-derived cells from patients with sporadic Parkinson's disease.

Cook AL, Vitale AM, Ravishankar S, Matigian N, Sutherland GT, Shan J, Sutharsan R, Perry C, Silburn PA, Mellick GD, Whitelaw ML, Wells CA, Mackay-Sim A, Wood SA.

PLoS One. 2011;6(7):e21907. doi: 10.1371/journal.pone.0021907. Epub 2011 Jul 1.

19.

Maternal influences on the transmission of leukocyte gene expression profiles in population samples from Brisbane, Australia.

Mason E, Tronc G, Nones K, Matigian N, Kim J, Aronow BJ, Wolfinger RD, Wells C, Gibson G.

PLoS One. 2010 Dec 31;5(12):e14479. doi: 10.1371/journal.pone.0014479.

20.

Disease-specific, neurosphere-derived cells as models for brain disorders.

Matigian N, Abrahamsen G, Sutharsan R, Cook AL, Vitale AM, Nouwens A, Bellette B, An J, Anderson M, Beckhouse AG, Bennebroek M, Cecil R, Chalk AM, Cochrane J, Fan Y, Féron F, McCurdy R, McGrath JJ, Murrell W, Perry C, Raju J, Ravishankar S, Silburn PA, Sutherland GT, Mahler S, Mellick GD, Wood SA, Sue CM, Wells CA, Mackay-Sim A.

Dis Model Mech. 2010 Nov-Dec;3(11-12):785-98. doi: 10.1242/dmm.005447. Epub 2010 Aug 10.

21.

The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line.

FANTOM Consortium, Suzuki H, Forrest AR, van Nimwegen E, Daub CO, Balwierz PJ, Irvine KM, Lassmann T, Ravasi T, Hasegawa Y, de Hoon MJ, Katayama S, Schroder K, Carninci P, Tomaru Y, Kanamori-Katayama M, Kubosaki A, Akalin A, Ando Y, Arner E, Asada M, Asahara H, Bailey T, Bajic VB, Bauer D, Beckhouse AG, Bertin N, Björkegren J, Brombacher F, Bulger E, Chalk AM, Chiba J, Cloonan N, Dawe A, Dostie J, Engström PG, Essack M, Faulkner GJ, Fink JL, Fredman D, Fujimori K, Furuno M, Gojobori T, Gough J, Grimmond SM, Gustafsson M, Hashimoto M, Hashimoto T, Hatakeyama M, Heinzel S, Hide W, Hofmann O, Hörnquist M, Huminiecki L, Ikeo K, Imamoto N, Inoue S, Inoue Y, Ishihara R, Iwayanagi T, Jacobsen A, Kaur M, Kawaji H, Kerr MC, Kimura R, Kimura S, Kimura Y, Kitano H, Koga H, Kojima T, Kondo S, Konno T, Krogh A, Kruger A, Kumar A, Lenhard B, Lennartsson A, Lindow M, Lizio M, Macpherson C, Maeda N, Maher CA, Maqungo M, Mar J, Matigian NA, Matsuda H, Mattick JS, Meier S, Miyamoto S, Miyamoto-Sato E, Nakabayashi K, Nakachi Y, Nakano M, Nygaard S, Okayama T, Okazaki Y, Okuda-Yabukami H, Orlando V, Otomo J, Pachkov M, Petrovsky N, Plessy C, Quackenbush J, Radovanovic A, Rehli M, Saito R, Sandelin A, Schmeier S, Schönbach C, Schwartz AS, Semple CA, Sera M, Severin J, Shirahige K, Simons C, St Laurent G, Suzuki M, Suzuki T, Sweet MJ, Taft RJ, Takeda S, Takenaka Y, Tan K, Taylor MS, Teasdale RD, Tegnér J, Teichmann S, Valen E, Wahlestedt C, Waki K, Waterhouse A, Wells CA, Winther O, Wu L, Yamaguchi K, Yanagawa H, Yasuda J, Zavolan M, Hume DA; Riken Omics Science Center, Arakawa T, Fukuda S, Imamura K, Kai C, Kaiho A, Kawashima T, Kawazu C, Kitazume Y, Kojima M, Miura H, Murakami K, Murata M, Ninomiya N, Nishiyori H, Noma S, Ogawa C, Sano T, Simon C, Tagami M, Takahashi Y, Kawai J, Hayashizaki Y.

Nat Genet. 2009 May;41(5):553-62. doi: 10.1038/ng.375. Epub 2009 Apr 19.

PMID:
19377474
22.

A cross-study transcriptional analysis of Parkinson's disease.

Sutherland GT, Matigian NA, Chalk AM, Anderson MJ, Silburn PA, Mackay-Sim A, Wells CA, Mellick GD.

PLoS One. 2009;4(3):e4955. doi: 10.1371/journal.pone.0004955. Epub 2009 Mar 23.

23.

Fibroblast and lymphoblast gene expression profiles in schizophrenia: are non-neural cells informative?

Matigian NA, McCurdy RD, Féron F, Perry C, Smith H, Filippich C, McLean D, McGrath J, Mackay-Sim A, Mowry B, Hayward NK.

PLoS One. 2008 Jun 11;3(6):e2412. doi: 10.1371/journal.pone.0002412.

24.

Gene expression analysis in absence epilepsy using a monozygotic twin design.

Helbig I, Matigian NA, Vadlamudi L, Lawrence KM, Bayly MA, Bain SM, Diyagama D, Scheffer IE, Mulley JC, Holloway AJ, Dibbens LM, Berkovic SF, Hayward NK.

Epilepsia. 2008 Sep;49(9):1546-54. doi: 10.1111/j.1528-1167.2008.01630.x. Epub 2008 Apr 24.

25.

Tissue-specific promoter utilisation of the kallikrein-related peptidase genes, KLK5 and KLK7, and cellular localisation of the encoded proteins suggest roles in exocrine pancreatic function.

Dong Y, Matigian N, Harvey TJ, Samaratunga H, Hooper JD, Clements JA.

Biol Chem. 2008 Feb;389(2):99-109. doi: 10.1515/BC.2008.013.

PMID:
18163887
26.

Expression profiling in monozygotic twins discordant for bipolar disorder reveals dysregulation of the WNT signalling pathway.

Matigian N, Windus L, Smith H, Filippich C, Pantelis C, McGrath J, Mowry B, Hayward N.

Mol Psychiatry. 2007 Sep;12(9):815-25. Epub 2007 Apr 17.

PMID:
17440432
27.

Replicated effects of sex and genotype on gene expression in human lymphoblastoid cell lines.

McRae AF, Matigian NA, Vadlamudi L, Mulley JC, Mowry B, Martin NG, Berkovic SF, Hayward NK, Visscher PM.

Hum Mol Genet. 2007 Feb 15;16(4):364-73. Epub 2006 Dec 12.

PMID:
17164263
28.

Cell cycle alterations in biopsied olfactory neuroepithelium in schizophrenia and bipolar I disorder using cell culture and gene expression analyses.

McCurdy RD, Féron F, Perry C, Chant DC, McLean D, Matigian N, Hayward NK, McGrath JJ, Mackay-Sim A.

Schizophr Res. 2006 Feb 28;82(2-3):163-73. Epub 2006 Jan 6.

PMID:
16406496

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