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Items: 26

1.

Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function.

Inskeep WP, Rusch DB, Jay ZJ, Herrgard MJ, Kozubal MA, Richardson TH, Macur RE, Hamamura N, Jennings Rd, Fouke BW, Reysenbach AL, Roberto F, Young M, Schwartz A, Boyd ES, Badger JH, Mathur EJ, Ortmann AC, Bateson M, Geesey G, Frazier M.

PLoS One. 2010 Mar 19;5(3):e9773. doi: 10.1371/journal.pone.0009773.

2.

Functional characterization and high-throughput proteomic analysis of interrupted genes in the archaeon Sulfolobus solfataricus.

Cobucci-Ponzano B, Guzzini L, Benelli D, Londei P, Perrodou E, Lecompte O, Tran D, Sun J, Wei J, Mathur EJ, Rossi M, Moracci M.

J Proteome Res. 2010 May 7;9(5):2496-507. doi: 10.1021/pr901166q.

PMID:
20192274
3.

Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite.

Warnecke F, Luginbühl P, Ivanova N, Ghassemian M, Richardson TH, Stege JT, Cayouette M, McHardy AC, Djordjevic G, Aboushadi N, Sorek R, Tringe SG, Podar M, Martin HG, Kunin V, Dalevi D, Madejska J, Kirton E, Platt D, Szeto E, Salamov A, Barry K, Mikhailova N, Kyrpides NC, Matson EG, Ottesen EA, Zhang X, Hernández M, Murillo C, Acosta LG, Rigoutsos I, Tamayo G, Green BD, Chang C, Rubin EM, Mathur EJ, Robertson DE, Hugenholtz P, Leadbetter JR.

Nature. 2007 Nov 22;450(7169):560-5.

PMID:
18033299
4.

Proteorhodopsin in the ubiquitous marine bacterium SAR11.

Giovannoni SJ, Bibbs L, Cho JC, Stapels MD, Desiderio R, Vergin KL, Rappé MS, Laney S, Wilhelm LJ, Tripp HJ, Mathur EJ, Barofsky DF.

Nature. 2005 Nov 3;438(7064):82-5.

PMID:
16267553
5.

High-throughput cultivation of microorganisms using microcapsules.

Zengler K, Walcher M, Clark G, Haller I, Toledo G, Holland T, Mathur EJ, Woodnutt G, Short JM, Keller M.

Methods Enzymol. 2005;397:124-30.

PMID:
16260288
6.

Genome streamlining in a cosmopolitan oceanic bacterium.

Giovannoni SJ, Tripp HJ, Givan S, Podar M, Vergin KL, Baptista D, Bibbs L, Eads J, Richardson TH, Noordewier M, Rappé MS, Short JM, Carrington JC, Mathur EJ.

Science. 2005 Aug 19;309(5738):1242-5.

7.

Comparative metagenomics of microbial communities.

Tringe SG, von Mering C, Kobayashi A, Salamov AA, Chen K, Chang HW, Podar M, Short JM, Mathur EJ, Detter JC, Bork P, Hugenholtz P, Rubin EM.

Science. 2005 Apr 22;308(5721):554-7.

8.

Discovery of pectin-degrading enzymes and directed evolution of a novel pectate lyase for processing cotton fabric.

Solbak AI, Richardson TH, McCann RT, Kline KA, Bartnek F, Tomlinson G, Tan X, Parra-Gessert L, Frey GJ, Podar M, Luginbühl P, Gray KA, Mathur EJ, Robertson DE, Burk MJ, Hazlewood GP, Short JM, Kerovuo J.

J Biol Chem. 2005 Mar 11;280(10):9431-8. Epub 2004 Dec 23.

9.

Unusual microbial xylanases from insect guts.

Brennan Y, Callen WN, Christoffersen L, Dupree P, Goubet F, Healey S, Hernández M, Keller M, Li K, Palackal N, Sittenfeld A, Tamayo G, Wells S, Hazlewood GP, Mathur EJ, Short JM, Robertson DE, Steer BA.

Appl Environ Microbiol. 2004 Jun;70(6):3609-17.

10.

An evolutionary route to xylanase process fitness.

Palackal N, Brennan Y, Callen WN, Dupree P, Frey G, Goubet F, Hazlewood GP, Healey S, Kang YE, Kretz KA, Lee E, Tan X, Tomlinson GL, Verruto J, Wong VW, Mathur EJ, Short JM, Robertson DE, Steer BA.

Protein Sci. 2004 Feb;13(2):494-503. Epub 2004 Jan 10.

11.

Cultivating the uncultured.

Zengler K, Toledo G, Rappe M, Elkins J, Mathur EJ, Short JM, Keller M.

Proc Natl Acad Sci U S A. 2002 Nov 26;99(24):15681-6. Epub 2002 Nov 18.

12.

Galactomannanases Man2 and Man5 from Thermotoga species: growth physiology on galactomannans, gene sequence analysis, and biochemical properties of recombinant enzymes.

Parker KN, Chhabra SR, Lam D, Callen W, Duffaud GD, Snead MA, Short JM, Mathur EJ, Kelly RM.

Biotechnol Bioeng. 2001 Nov 5;75(3):322-33.

PMID:
11590605
13.

Carboxylesterase from Sulfolobus solfataricus P1.

Sehgal AC, Callen W, Mathur EJ, Short JM, Kelly RM.

Methods Enzymol. 2001;330:461-71. No abstract available.

PMID:
11210525
14.

Beta-Endoglucanase from Pyrococcus furiosus.

Cady SG, Bauer MW, Callen W, Snead MA, Mathur EJ, Short JM, Kelly RM.

Methods Enzymol. 2001;330:346-54. No abstract available.

PMID:
11210513
15.

Alpha-D-galactosidases from Thermotoga species.

Miller ES Jr, Kimberley, Parker N, Liebl W, Lam D, Callen W, Snead MA, Mathur EJ, Short JM, Kelly RM.

Methods Enzymol. 2001;330:246-60. No abstract available.

PMID:
11210503
16.

beta-Mannosidase from Thermotoga species.

Parker KN, Chhabra S, Lam D, Snead MA, Mathur EJ, Kelly RM.

Methods Enzymol. 2001;330:238-46. No abstract available.

PMID:
11210502
17.

Beta-mannanases from Thermotoga species.

Chhabra S, Parker KN, Lam D, Callen W, Snead MA, Mathur EJ, Short JM, Kelly RM.

Methods Enzymol. 2001;330:224-38. No abstract available.

PMID:
11210501
18.
19.
20.

Characterization of a DNA polymerase from the uncultivated psychrophilic archaeon Cenarchaeum symbiosum.

Schleper C, Swanson RV, Mathur EJ, DeLong EF.

J Bacteriol. 1997 Dec;179(24):7803-11.

21.

The DNA polymerase gene from the hyperthermophilic marine archaebacterium, Pyrococcus furiosus, shows sequence homology with alpha-like DNA polymerases.

Mathur EJ, Adams MW, Callen WN, Cline JM.

Nucleic Acids Res. 1991 Dec 25;19(24):6952. No abstract available.

22.

High-fidelity amplification using a thermostable DNA polymerase isolated from Pyrococcus furiosus.

Lundberg KS, Shoemaker DD, Adams MW, Short JM, Sorge JA, Mathur EJ.

Gene. 1991 Dec 1;108(1):1-6.

PMID:
1761218
23.

Kinetic and structural effects of activation of bovine kidney aldose reductase.

Grimshaw CE, Shahbaz M, Jahangiri G, Putney CG, McKercher SR, Mathur EJ.

Biochemistry. 1989 Jun 27;28(13):5343-53.

PMID:
2550052
24.

Immunoquantitation of aldose reductase in human tissues.

Grimshaw CE, Mathur EJ.

Anal Biochem. 1989 Jan;176(1):66-71.

PMID:
2496622
25.

Phylogenetic conservation of epitopes in mammalian aldose reductase: application to immunoquantitation.

Mathur EJ, Grimshaw CE.

Arch Biochem Biophys. 1986 Jun;247(2):321-7.

PMID:
2424371
26.

Purification and properties of 5,10-methenyltetrahydrofolate synthetase from Lactobacillus casei.

Grimshaw CE, Henderson GB, Soppe GG, Hansen G, Mathur EJ, Huennekens FM.

J Biol Chem. 1984 Mar 10;259(5):2728-33.

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