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Genomic dynamics of species and mobile genetic elements in a prolonged blaIMP-4-associated carbapenemase outbreak in an Australian hospital.

Kizny Gordon A, Phan HTT, Lipworth SI, Cheong E, Gottlieb T, George S, Peto TEA, Mathers AJ, Walker AS, Crook DW, Stoesser N.

J Antimicrob Chemother. 2020 Jan 20. pii: dkz526. doi: 10.1093/jac/dkz526. [Epub ahead of print]


Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species.

Mathers AJ, Vegesana K, Mesner IG, Ainsworth J, Pannone A, Crook DW, Sifri CD, Sheppard A, Stoesser N, Peto T, Walker AS, Eyre DW.

J Hosp Infect. 2020 Jan 10. pii: S0195-6701(20)30007-4. doi: 10.1016/j.jhin.2020.01.005. [Epub ahead of print]


Impact of Hot-Melt Extrusion Processing Conditions on Physicochemical Properties of Amorphous Solid Dispersions Containing Thermally Labile Acrylic Copolymer.

Mathers A, Hassouna F, Malinová L, Merna J, Růžička K, Fulem M.

J Pharm Sci. 2020 Feb;109(2):1008-1019. doi: 10.1016/j.xphs.2019.10.005. Epub 2019 Oct 9.


Managing All the Genotypic Knowledge: Approach to a Septic Patient Colonized by Different Enterobacteriales with Unique Carbapenemases.

Park SC, Wailan AM, Barry KE, Vegesana K, Carroll J, Mathers AJ, Miller WR, Munita JM.

Antimicrob Agents Chemother. 2019 Jul 25;63(8). pii: e00029-19. doi: 10.1128/AAC.00029-19. Print 2019 Aug.


The Role of fosA in Challenges with Fosfomycin Susceptibility Testing of Multispecies Klebsiella pneumoniae Carbapenemase-Producing Clinical Isolates.

Elliott ZS, Barry KE, Cox HL, Stoesser N, Carroll J, Vegesana K, Kotay S, Sheppard AE, Wailan A, Crook DW, Parikh H, Mathers AJ.

J Clin Microbiol. 2019 Sep 24;57(10). pii: e00634-19. doi: 10.1128/JCM.00634-19. Print 2019 Oct.


Mesophyll porosity is modulated by the presence of functional stomata.

Lundgren MR, Mathers A, Baillie AL, Dunn J, Wilson MJ, Hunt L, Pajor R, Fradera-Soler M, Rolfe S, Osborne CP, Sturrock CJ, Gray JE, Mooney SJ, Fleming AJ.

Nat Commun. 2019 Jun 27;10(1):2825. doi: 10.1038/s41467-019-10826-5.


Lee et al. Respond.

Lee K, Mathers A, Hawkins B.

Am J Public Health. 2019 Jul;109(7):e11-e12. doi: 10.2105/AJPH.2019.305111. No abstract available.


Use of a cohorting-unit and systematic surveillance cultures to control a Klebsiella pneumoniae carbapenemase (KPC)-producing Enterobacteriaceae outbreak.

Reeme AE, Bowler SL, Buchan BW, Graham MB, Behrens E, Singh S, Hong JC, Arvan J, Hyke JW, Palen L, Savage S, Seliger H, Huerta S, Ledeboer NA, Kotay S, Mathers AJ, Cooper VS, Mustapha MM, Mettus RT, Doi Y, Munoz-Price LS.

Infect Control Hosp Epidemiol. 2019 Jul;40(7):767-773. doi: 10.1017/ice.2019.99. Epub 2019 May 14.


Clinical Yield of a Molecular Diagnostic Panel for Enteric Pathogens in Adult Outpatients With Diarrhea and Validation of Guidelines-Based Criteria for Testing.

Clark SD, Sidlak M, Mathers AJ, Poulter M, Platts-Mills JA.

Open Forum Infect Dis. 2019 Apr 16;6(4):ofz162. doi: 10.1093/ofid/ofz162. eCollection 2019 Apr.


Mycobacterium avium Complex Diversity within Lung Disease, as Revealed by Whole-Genome Sequencing.

Operario DJ, Pholwat S, Koeppel AF, Prorock A, Bao Y, Sol-Church K, Scheurenbrand M, Poulter M, Turner S, Parikh HI, Mathers A, Houpt ER.

Am J Respir Crit Care Med. 2019 Aug 1;200(3):393-396. doi: 10.1164/rccm.201903-0669LE. No abstract available.


Don't overlook the little guy: An evaluation of the frequency of small plasmids co-conjugating with larger carbapenemase gene containing plasmids.

Barry KE, Wailan AM, Sheppard AE, Crook D, Vegesana K, Stoesser N, Parikh HI, Sebra R, Mathers AJ.

Plasmid. 2019 May;103:1-8. doi: 10.1016/j.plasmid.2019.03.005. Epub 2019 Mar 27.


Klebsiella quasipneumoniae Provides a Window into Carbapenemase Gene Transfer, Plasmid Rearrangements, and Patient Interactions with the Hospital Environment.

Mathers AJ, Crook D, Vaughan A, Barry KE, Vegesana K, Stoesser N, Parikh HI, Sebra R, Kotay S, Walker AS, Sheppard AE.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e02513-18. doi: 10.1128/AAC.02513-18. Print 2019 Jun.


Meropenem-Vaborbactam as Salvage Therapy for Ceftazidime-Avibactam-Resistant Klebsiella pneumoniae Bacteremia and Abscess in a Liver Transplant Recipient.

Athans V, Neuner EA, Hassouna H, Richter SS, Keller G, Castanheira M, Brizendine KD, Mathers AJ.

Antimicrob Agents Chemother. 2018 Dec 21;63(1). pii: e01551-18. doi: 10.1128/AAC.01551-18. Print 2019 Jan.


Transnational Tobacco Companies and New Nicotine Delivery Systems.

Mathers A, Hawkins B, Lee K.

Am J Public Health. 2019 Feb;109(2):227-235. doi: 10.2105/AJPH.2018.304813. Epub 2018 Dec 20. Review.


The Use and Effects of Electronic Health Tools for Patient Self-Monitoring and Reporting of Outcomes Following Medication Use: Systematic Review.

Lancaster K, Abuzour A, Khaira M, Mathers A, Chan A, Bui V, Lok A, Thabane L, Dolovich L.

J Med Internet Res. 2018 Dec 18;20(12):e294. doi: 10.2196/jmir.9284.


TETyper: a bioinformatic pipeline for classifying variation and genetic contexts of transposable elements from short-read whole-genome sequencing data.

Sheppard AE, Stoesser N, German-Mesner I, Vegesana K, Sarah Walker A, Crook DW, Mathers AJ.

Microb Genom. 2018 Dec;4(12). doi: 10.1099/mgen.0.000232. Epub 2018 Nov 22.


Investigating the microstructure of plant leaves in 3D with lab-based X-ray computed tomography.

Mathers AW, Hepworth C, Baillie AL, Sloan J, Jones H, Lundgren M, Fleming AJ, Mooney SJ, Sturrock CJ.

Plant Methods. 2018 Nov 12;14:99. doi: 10.1186/s13007-018-0367-7. eCollection 2018.


Droplet- Rather than Aerosol-Mediated Dispersion Is the Primary Mechanism of Bacterial Transmission from Contaminated Hand-Washing Sink Traps.

Kotay SM, Donlan RM, Ganim C, Barry K, Christensen BE, Mathers AJ.

Appl Environ Microbiol. 2019 Jan 9;85(2). pii: e01997-18. doi: 10.1128/AEM.01997-18. Print 2019 Jan 15.


Effect and Safety of Meropenem-Vaborbactam versus Best-Available Therapy in Patients with Carbapenem-Resistant Enterobacteriaceae Infections: The TANGO II Randomized Clinical Trial.

Wunderink RG, Giamarellos-Bourboulis EJ, Rahav G, Mathers AJ, Bassetti M, Vazquez J, Cornely OA, Solomkin J, Bhowmick T, Bishara J, Daikos GL, Felton T, Furst MJL, Kwak EJ, Menichetti F, Oren I, Alexander EL, Griffith D, Lomovskaya O, Loutit J, Zhang S, Dudley MN, Kaye KS.

Infect Dis Ther. 2018 Dec;7(4):439-455. doi: 10.1007/s40121-018-0214-1. Epub 2018 Oct 1.


A Large, Refractory Nosocomial Outbreak of Klebsiella pneumoniae Carbapenemase-Producing Escherichia coli Demonstrates Carbapenemase Gene Outbreaks Involving Sink Sites Require Novel Approaches to Infection Control.

Decraene V, Phan HTT, George R, Wyllie DH, Akinremi O, Aiken Z, Cleary P, Dodgson A, Pankhurst L, Crook DW, Lenney C, Walker AS, Woodford N, Sebra R, Fath-Ordoubadi F, Mathers AJ, Seale AC, Guiver M, McEwan A, Watts V, Welfare W, Stoesser N, Cawthorne J; TRACE Investigators’ Group.

Antimicrob Agents Chemother. 2018 Nov 26;62(12). pii: e01689-18. doi: 10.1128/AAC.01689-18. Print 2018 Dec.


The effect of rapid diagnostic testing with Infectious Diseases fellow consultative intervention on the management of enterococcal bloodstream infection.

Gray ME, Cox HL, Donohue LE, Poulter MD, Eby JC, Mathers AJ.

Diagn Microbiol Infect Dis. 2018 Dec;92(4):319-324. doi: 10.1016/j.diagmicrobio.2018.07.004. Epub 2018 Jul 9.


The tobacco industry's challenges to standardised packaging: A comparative analysis of issue framing in public relations campaigns in four countries.

MacKenzie R, Mathers A, Hawkins B, Eckhardt J, Smith J.

Health Policy. 2018 Sep;122(9):1001-1011. doi: 10.1016/j.healthpol.2018.08.001. Epub 2018 Aug 15. Review.


mTORC2 deficiency in cutaneous dendritic cells potentiates CD8+ effector T cell responses and accelerates skin graft rejection.

Watson AR, Dai H, Diaz-Perez JA, Killeen ME, Mathers AR, Thomson AW.

Am J Transplant. 2019 Mar;19(3):646-661. doi: 10.1111/ajt.15083. Epub 2018 Sep 17.


Extracellular ATP and IL-23 Form a Local Inflammatory Circuit Leading to the Development of a Neutrophil-Dependent Psoriasiform Dermatitis.

Diaz-Perez JA, Killeen ME, Yang Y, Carey CD, Falo LD Jr, Mathers AR.

J Invest Dermatol. 2018 Dec;138(12):2595-2605. doi: 10.1016/j.jid.2018.05.018. Epub 2018 Jun 2.


Environmental Reservoirs of Nosocomial Infection: Imputation Methods for Linking Clinical and Environmental Microbiological Data to Understand Infection Transmission.

Julia L, Vilankar K, Kang H, Brown DE, Mathers A, Barnes LE.

AMIA Annu Symp Proc. 2018 Apr 16;2017:1120-1129. eCollection 2017.


Twenty-first Century Cures Act and Antimicrobial Susceptibility Testing: Clinical Implications in the Era of Multidrug Resistance.

Humphries RM, Hindler J, Jane Ferraro M, Mathers A.

Clin Infect Dis. 2018 Sep 14;67(7):1132-1138. doi: 10.1093/cid/ciy432.


Characterizations of handwashing sink activities in a single hospital medical intensive care unit.

Grabowski M, Lobo JM, Gunnell B, Enfield K, Carpenter R, Barnes L, Mathers AJ.

J Hosp Infect. 2018 Nov;100(3):e115-e122. doi: 10.1016/j.jhin.2018.04.025. Epub 2018 May 5.


Marketing IQOS in a dark market.

Mathers A, Schwartz R, O'Connor S, Fung M, Diemert L.

Tob Control. 2019 Mar;28(2):237-238. doi: 10.1136/tobaccocontrol-2017-054216. Epub 2018 May 3.


Reduced Clostridium difficile Tests and Laboratory-Identified Events With a Computerized Clinical Decision Support Tool and Financial Incentive.

Madden GR, German Mesner I, Cox HL, Mathers AJ, Lyman JA, Sifri CD, Enfield KB.

Infect Control Hosp Epidemiol. 2018 Jun;39(6):737-740. doi: 10.1017/ice.2018.53. Epub 2018 Apr 12.


Corrigendum: Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches.

George S, Pankhurst L, Hubbard A, Votintseva A, Stoesser N, Sheppard AE, Mathers A, Norris R, Navickaite I, Eaton C, Iqbal Z, Crook DW, Phan HTT.

Microb Genom. 2018 Mar;4(3). doi: 10.1099/mgen.0.000130. No abstract available.


Molecular diagnosis of antimicrobial resistance in Escherichia coli.

Fleece ME, Pholwat S, Mathers AJ, Houpt ER.

Expert Rev Mol Diagn. 2018 Mar;18(3):207-217. doi: 10.1080/14737159.2018.1439381. Epub 2018 Feb 19. Review.


Intensive Care Unit Wastewater Interventions to Prevent Transmission of Multispecies Klebsiella pneumoniae Carbapenemase-Producing Organisms.

Mathers AJ, Vegesana K, German Mesner I, Barry KE, Pannone A, Baumann J, Crook DW, Stoesser N, Kotay S, Carroll J, Sifri CD.

Clin Infect Dis. 2018 Jul 2;67(2):171-178. doi: 10.1093/cid/ciy052.


Reply to Weinbren and Collins.

Eby JC, Mathers AJ, Cox HL, Richey MM, Platts-Mills JA, Novicoff WM.

Clin Infect Dis. 2018 Apr 17;66(9):1485. doi: 10.1093/cid/cix1017. No abstract available.


Topical electrophilic nitro-fatty acids potentiate cutaneous inflammation.

Mathers AR, Carey CD, Killeen ME, Salvatore SR, Ferris LK, Freeman BA, Schopfer FJ, Falo LD Jr.

Free Radic Biol Med. 2018 Feb 1;115:31-42. doi: 10.1016/j.freeradbiomed.2017.11.009. Epub 2017 Nov 10.


Provider Role in Transmission of Carbapenem-Resistant Enterobacteriaceae.

Grabowski ME, Kang H, Wells KM, Sifri CD, Mathers AJ, Lobo JM.

Infect Control Hosp Epidemiol. 2017 Nov;38(11):1329-1334. doi: 10.1017/ice.2017.216. Epub 2017 Oct 24.


Resolving plasmid structures in Enterobacteriaceae using the MinION nanopore sequencer: assessment of MinION and MinION/Illumina hybrid data assembly approaches.

George S, Pankhurst L, Hubbard A, Votintseva A, Stoesser N, Sheppard AE, Mathers A, Norris R, Navickaite I, Eaton C, Iqbal Z, Crook DW, Phan HTT.

Microb Genom. 2017 Jun 9;3(8):e000118. doi: 10.1099/mgen.0.000118. eCollection 2017 Aug. Erratum in: Microb Genom. 2018 Mar;4(3):.


A Healthcare Improvement Intervention Combining Nucleic Acid Microarray Testing With Direct Physician Response for Management of Staphylococcus aureus Bacteremia.

Eby JC, Richey MM, Platts-Mills JA, Mathers AJ, Novicoff WM, Cox HL.

Clin Infect Dis. 2018 Jan 6;66(1):64-71. doi: 10.1093/cid/cix727.


Cell density and airspace patterning in the leaf can be manipulated to increase leaf photosynthetic capacity.

Lehmeier C, Pajor R, Lundgren MR, Mathers A, Sloan J, Bauch M, Mitchell A, Bellasio C, Green A, Bouyer D, Schnittger A, Sturrock C, Osborne CP, Rolfe S, Mooney S, Fleming AJ.

Plant J. 2017 Dec;92(6):981-994. doi: 10.1111/tpj.13727. Epub 2017 Nov 15.


Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli.

Stoesser N, Sheppard AE, Peirano G, Anson LW, Pankhurst L, Sebra R, Phan HTT, Kasarskis A, Mathers AJ, Peto TEA, Bradford P, Motyl MR, Walker AS, Crook DW, Pitout JD.

Sci Rep. 2017 Jul 19;7(1):5917. doi: 10.1038/s41598-017-06256-2.


Widening the gap: additional concerns with crowdfunding in health care.

Snyder J, Chow-White P, Crooks VA, Mathers A.

Lancet Oncol. 2017 May;18(5):e240. doi: 10.1016/S1470-2045(17)30259-0. No abstract available.


Enhanced Klebsiella pneumoniae Carbapenemase Expression from a Novel Tn4401 Deletion.

Cheruvanky A, Stoesser N, Sheppard AE, Crook DW, Hoffman PS, Weddle E, Carroll J, Sifri CD, Chai W, Barry K, Ramakrishnan G, Mathers AJ.

Antimicrob Agents Chemother. 2017 May 24;61(6). pii: e00025-17. doi: 10.1128/AAC.00025-17. Print 2017 Jun.


Spread from the Sink to the Patient: In Situ Study Using Green Fluorescent Protein (GFP)-Expressing Escherichia coli To Model Bacterial Dispersion from Hand-Washing Sink-Trap Reservoirs.

Kotay S, Chai W, Guilford W, Barry K, Mathers AJ.

Appl Environ Microbiol. 2017 Mar 31;83(8). pii: e03327-16. doi: 10.1128/AEM.03327-16. Print 2017 Apr 15.


The Hospital Water Environment as a Reservoir for Carbapenem-Resistant Organisms Causing Hospital-Acquired Infections-A Systematic Review of the Literature.

Kizny Gordon AE, Mathers AJ, Cheong EYL, Gottlieb T, Kotay S, Walker AS, Peto TEA, Crook DW, Stoesser N.

Clin Infect Dis. 2017 May 15;64(10):1435-1444. doi: 10.1093/cid/cix132. Review. Erratum in: Clin Infect Dis. 2017 Oct 15;65(8):1431-1433.


Appealing to the crowd: ethical justifications in Canadian medical crowdfunding campaigns.

Snyder J, Crooks VA, Mathers A, Chow-White P.

J Med Ethics. 2017 Jun;43(6):364-367. doi: 10.1136/medethics-2016-103933. Epub 2017 Jan 30. Review.


Chromosomal Integration of the Klebsiella pneumoniae Carbapenemase Gene, blaKPC, in Klebsiella Species Is Elusive but Not Rare.

Mathers AJ, Stoesser N, Chai W, Carroll J, Barry K, Cherunvanky A, Sebra R, Kasarskis A, Peto TE, Walker AS, Sifri CD, Crook DW, Sheppard AE.

Antimicrob Agents Chemother. 2017 Feb 23;61(3). pii: e01823-16. doi: 10.1128/AAC.01823-16. Print 2017 Mar.


MCPIP1/Regnase-1 Restricts IL-17A- and IL-17C-Dependent Skin Inflammation.

Monin L, Gudjonsson JE, Childs EE, Amatya N, Xing X, Verma AH, Coleman BM, Garg AV, Killeen M, Mathers A, Ward NL, Gaffen SL.

J Immunol. 2017 Jan 15;198(2):767-775. doi: 10.4049/jimmunol.1601551. Epub 2016 Dec 5.


TREX through Cutaneous Health and Disease.

Mathers AR.

J Invest Dermatol. 2016 Dec;136(12):2337-2339. doi: 10.1016/j.jid.2016.06.628.


Fund my treatment!: A call for ethics-focused social science research into the use of crowdfunding for medical care.

Snyder J, Mathers A, Crooks VA.

Soc Sci Med. 2016 Nov;169:27-30. doi: 10.1016/j.socscimed.2016.09.024. Epub 2016 Sep 16.


Electrophilic nitro-fatty acids suppress allergic contact dermatitis in mice.

Mathers AR, Carey CD, Killeen ME, Diaz-Perez JA, Salvatore SR, Schopfer FJ, Freeman BA, Falo LD Jr.

Allergy. 2017 Apr;72(4):656-664. doi: 10.1111/all.13067. Epub 2016 Nov 11.


Tip-Loaded Dissolvable Microneedle Arrays Effectively Deliver Polymer-Conjugated Antibody Inhibitors of Tumor-Necrosis-Factor-Alpha Into Human Skin.

Korkmaz E, Friedrich EE, Ramadan MH, Erdos G, Mathers AR, Ozdoganlar OB, Washburn NR, Falo LD Jr.

J Pharm Sci. 2016 Nov;105(11):3453-3457. doi: 10.1016/j.xphs.2016.07.008. Epub 2016 Aug 17.


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