Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 106

1.

Social mixing and clinical features linked with transmission in a network of extensively drug-resistant (XDR) tuberculosis cases in KwaZulu-Natal, South Africa.

Nelson KN, Jenness SM, Mathema B, Lopman BA, Auld SC, Shah NS, Brust JCM, Ismail N, Omar SV, Brown TS, Allana S, Campbell A, Moodley P, Mlisana K, Gandhi NR.

Clin Infect Dis. 2019 Jul 12. pii: ciz636. doi: 10.1093/cid/ciz636. [Epub ahead of print]

PMID:
31342067
2.

Extensively drug-resistant tuberculosis 'hotspots' and sociodemographic associations in Durban, South Africa.

Peterson ML, Gandhi NR, Clennon J, Nelson KN, Morris N, Ismail N, Allana S, Campbell A, Brust JCM, Auld SC, Mathema B, Mlisana K, Moodley P, Shah NS.

Int J Tuberc Lung Dis. 2019 Jun 1;23(6):720-727. doi: 10.5588/ijtld.18.0575.

PMID:
31315705
3.

Plasmid-encoded tet(X) genes that confer high-level tigecycline resistance in Escherichia coli.

Sun J, Chen C, Cui CY, Zhang Y, Liu X, Cui ZH, Ma XY, Feng Y, Fang LX, Lian XL, Zhang RM, Tang YZ, Zhang KX, Liu HM, Zhuang ZH, Zhou SD, Lv JN, Du H, Huang B, Yu FY, Mathema B, Kreiswirth BN, Liao XP, Chen L, Liu YH.

Nat Microbiol. 2019 Jun 24. doi: 10.1038/s41564-019-0496-4. [Epub ahead of print]

PMID:
31235960
4.

Erratum for O'Donnell et al., "Early Detection of Emergent Extensively Drug-Resistant Tuberculosis by Flow Cytometry-Based Phenotyping and Whole-Genome Sequencing".

O'Donnell MR, Larsen MH, Brown TS, Jain P, Munsamy V, Wolf A, Uccellini L, Karim F, de Oliveira T, Mathema B, Jacobs WR, Pym A.

Antimicrob Agents Chemother. 2019 May 24;63(6). pii: e00764-19. doi: 10.1128/AAC.00764-19. Print 2019 Jun. No abstract available.

5.

Whole genome sequencing identifies bacterial factors affecting transmission of multidrug-resistant tuberculosis in a high-prevalence setting.

Dixit A, Freschi L, Vargas R, Calderon R, Sacchettini J, Drobniewski F, Galea JT, Contreras C, Yataco R, Zhang Z, Lecca L, Kolokotronis SO, Mathema B, Farhat MR.

Sci Rep. 2019 Apr 3;9(1):5602. doi: 10.1038/s41598-019-41967-8.

6.

Correction: Evaluating strategies for control of tuberculosis in prisons and prevention of spillover into communities: An observational and modeling study from Brazil.

Mabud TS, de Lourdes Delgado Alves M, Ko AI, Basu S, Walter KS, Cohen T, Mathema B, Colijn C, Lemos E, Croda J, Andrews JR.

PLoS Med. 2019 Mar 1;16(3):e1002764. doi: 10.1371/journal.pmed.1002764. eCollection 2019 Mar.

7.

Dual β-Lactam Combinations Highly Active against Mycobacterium abscessus Complex In Vitro.

Pandey R, Chen L, Manca C, Jenkins S, Glaser L, Vinnard C, Stone G, Lee J, Mathema B, Nuermberger EL, Bonomo RA, Kreiswirth BN.

MBio. 2019 Feb 12;10(1). pii: e02895-18. doi: 10.1128/mBio.02895-18.

8.

Beyond the SNP Threshold: Identifying Outbreak Clusters Using Inferred Transmissions.

Stimson J, Gardy J, Mathema B, Crudu V, Cohen T, Colijn C.

Mol Biol Evol. 2019 Mar 1;36(3):587-603. doi: 10.1093/molbev/msy242.

PMID:
30690464
9.

Evaluating strategies for control of tuberculosis in prisons and prevention of spillover into communities: An observational and modeling study from Brazil.

Mabud TS, de Lourdes Delgado Alves M, Ko AI, Basu S, Walter KS, Cohen T, Mathema B, Colijn C, Lemos E, Croda J, Andrews JR.

PLoS Med. 2019 Jan 24;16(1):e1002737. doi: 10.1371/journal.pmed.1002737. eCollection 2019 Jan. Erratum in: PLoS Med. 2019 Mar 1;16(3):e1002764.

10.

Early Detection of Emergent Extensively Drug-Resistant Tuberculosis by Flow Cytometry-Based Phenotyping and Whole-Genome Sequencing.

O'Donnell MR, Larsen MH, Brown TS, Jain P, Munsamy V, Wolf A, Uccellini L, Karim F, de Oliveira T, Mathema B, Jacobs WR, Pym A.

Antimicrob Agents Chemother. 2019 Mar 27;63(4). pii: e01834-18. doi: 10.1128/AAC.01834-18. Print 2019 Apr. Erratum in: Antimicrob Agents Chemother. 2019 May 24;63(6):.

PMID:
30670422
11.

Spatially targeted screening to reduce tuberculosis transmission in high-incidence settings.

Cudahy PGT, Andrews JR, Bilinski A, Dowdy DW, Mathema B, Menzies NA, Salomon JA, Shrestha S, Cohen T.

Lancet Infect Dis. 2019 Mar;19(3):e89-e95. doi: 10.1016/S1473-3099(18)30443-2. Epub 2018 Dec 13. Review.

PMID:
30554997
12.

Transmission of drug-resistant tuberculosis in HIV-endemic settings.

Khan PY, Yates TA, Osman M, Warren RM, van der Heijden Y, Padayatchi N, Nardell EA, Moore D, Mathema B, Gandhi N, Eldholm V, Dheda K, Hesseling AC, Mizrahi V, Rustomjee R, Pym A.

Lancet Infect Dis. 2019 Mar;19(3):e77-e88. doi: 10.1016/S1473-3099(18)30537-1. Epub 2018 Dec 13. Review. Erratum in: Lancet Infect Dis. 2019 Mar 6;:.

PMID:
30554996
13.

Global variation in bacterial strains that cause tuberculosis disease: a systematic review and meta-analysis.

Wiens KE, Woyczynski LP, Ledesma JR, Ross JM, Zenteno-Cuevas R, Goodridge A, Ullah I, Mathema B, Djoba Siawaya JF, Biehl MH, Ray SE, Bhattacharjee NV, Henry NJ, Reiner RC Jr, Kyu HH, Murray CJL, Hay SI.

BMC Med. 2018 Oct 30;16(1):196. doi: 10.1186/s12916-018-1180-x.

14.

Global expansion of Mycobacterium tuberculosis lineage 4 shaped by colonial migration and local adaptation.

Brynildsrud OB, Pepperell CS, Suffys P, Grandjean L, Monteserin J, Debech N, Bohlin J, Alfsnes K, Pettersson JO, Kirkeleite I, Fandinho F, da Silva MA, Perdigao J, Portugal I, Viveiros M, Clark T, Caws M, Dunstan S, Thai PVK, Lopez B, Ritacco V, Kitchen A, Brown TS, van Soolingen D, O'Neill MB, Holt KE, Feil EJ, Mathema B, Balloux F, Eldholm V.

Sci Adv. 2018 Oct 17;4(10):eaat5869. doi: 10.1126/sciadv.aat5869. eCollection 2018 Oct.

15.

Publisher Correction: Mycobacterium tuberculosis carrying a rifampicin drug resistance mutation reprograms macrophage metabolism through cell wall lipid changes.

Howard NC, Marin ND, Ahmed M, Rosa BA, Martin J, Bambouskova M, Sergushichev A, Loginicheva E, Kurepina N, Rangel-Moreno J, Chen L, Kreiswirth BN, Klein RS, Balada-Llasat JM, Torrelles JB, Amarasinghe GK, Mitreva M, Artyomov MN, Hsu FF, Mathema B, Khader SA.

Nat Microbiol. 2018 Nov;3(11):1327. doi: 10.1038/s41564-018-0281-9.

PMID:
30327492
16.

Mycobacterium tuberculosis carrying a rifampicin drug resistance mutation reprograms macrophage metabolism through cell wall lipid changes.

Howard NC, Marin ND, Ahmed M, Rosa BA, Martin J, Bambouskova M, Sergushichev A, Loginicheva E, Kurepina N, Rangel-Moreno J, Chen L, Kreiswirth BN, Klein RS, Balada-Llasat JM, Torrelles JB, Amarasinghe GK, Mitreva M, Artyomov MN, Hsu FF, Mathema B, Khader SA.

Nat Microbiol. 2018 Oct;3(10):1099-1108. doi: 10.1038/s41564-018-0245-0. Epub 2018 Sep 17. Erratum in: Nat Microbiol. 2018 Nov;3(11):1327.

17.

Effect of Antiretroviral Therapy on Treatment Outcomes in a Prospective Study of Extensively Drug-Resistant Tuberculosis (XDR-TB) HIV Coinfection Treatment in KwaZulu-Natal, South Africa.

Yuengling KA, Padayatchi N, Wolf A, Mathema B, Brown T, Horsburgh CR, OʼDonnell MR.

J Acquir Immune Defic Syndr. 2018 Dec 1;79(4):474-480. doi: 10.1097/QAI.0000000000001833.

PMID:
30212394
18.

Extensively drug-resistant tuberculosis in South Africa: genomic evidence supporting transmission in communities.

Auld SC, Shah NS, Mathema B, Brown TS, Ismail N, Omar SV, Brust JCM, Nelson KN, Allana S, Campbell A, Mlisana K, Moodley P, Gandhi NR.

Eur Respir J. 2018 Oct 18;52(4). pii: 1800246. doi: 10.1183/13993003.00246-2018. Print 2018 Oct.

PMID:
30115614
19.

Precision Surveillance for Viral Respiratory Pathogens: Virome Capture Sequencing for the Detection and Genomic Characterization of Severe Acute Respiratory Infection in Uganda.

Cummings MJ, Tokarz R, Bakamutumaho B, Kayiwa J, Byaruhanga T, Owor N, Namagambo B, Wolf A, Mathema B, Lutwama JJ, Schluger NW, Lipkin WI, O'Donnell MR.

Clin Infect Dis. 2019 Mar 19;68(7):1118-1125. doi: 10.1093/cid/ciy656.

20.

Spatial Patterns of Extensively Drug-Resistant Tuberculosis Transmission in KwaZulu-Natal, South Africa.

Nelson KN, Shah NS, Mathema B, Ismail N, Brust JCM, Brown TS, Auld SC, Omar SV, Morris N, Campbell A, Allana S, Moodley P, Mlisana K, Gandhi NR.

J Infect Dis. 2018 Nov 5;218(12):1964-1973. doi: 10.1093/infdis/jiy394. Erratum in: J Infect Dis. 2019 Jan 9;219(3):509.

PMID:
29961879
21.

Towards better prediction of Mycobacterium tuberculosis lineages from MIRU-VNTR data.

Thain N, Le C, Crossa A, Ahuja SD, Meissner JS, Mathema B, Kreiswirth B, Kurepina N, Cohen T, Chindelevitch L.

Infect Genet Evol. 2019 Aug;72:59-66. doi: 10.1016/j.meegid.2018.06.029. Epub 2018 Jun 28.

22.

What We Know About Tuberculosis Transmission: An Overview.

Churchyard G, Kim P, Shah NS, Rustomjee R, Gandhi N, Mathema B, Dowdy D, Kasmar A, Cardenas V.

J Infect Dis. 2017 Nov 3;216(suppl_6):S629-S635. doi: 10.1093/infdis/jix362. Review.

23.

Drivers of Tuberculosis Transmission.

Mathema B, Andrews JR, Cohen T, Borgdorff MW, Behr M, Glynn JR, Rustomjee R, Silk BJ, Wood R.

J Infect Dis. 2017 Nov 3;216(suppl_6):S644-S653. doi: 10.1093/infdis/jix354. Review.

24.

Research Roadmap for Tuberculosis Transmission Science: Where Do We Go From Here and How Will We Know When We're There?

Auld SC, Kasmar AG, Dowdy DW, Mathema B, Gandhi NR, Churchyard GJ, Rustomjee R, Shah NS.

J Infect Dis. 2017 Nov 3;216(suppl_6):S662-S668. doi: 10.1093/infdis/jix353. Review.

25.

Genotypic characterisation of Mycobacterium tuberculosis isolates from tuberculous meningitis patients at a tertiary neurocare centre in Southern India.

Chandramuki A, Khanna N, Shashkina E, Kurepina N, Mathema B, Kreiswirth BN, Venkataswamy MM.

Indian J Med Microbiol. 2017 Apr-Jun;35(2):211-215. doi: 10.4103/ijmm.IJMM_16_166.

26.

Carbapenem-resistant Enterobacteriaceae in the community: a scoping review.

Kelly AM, Mathema B, Larson EL.

Int J Antimicrob Agents. 2017 Aug;50(2):127-134. doi: 10.1016/j.ijantimicag.2017.03.012. Epub 2017 Jun 21. Review.

27.

Impact of gyrB and eis Mutations in Improving Detection of Second-Line-Drug Resistance among Mycobacterium tuberculosis Isolates from Georgia.

Bablishvili N, Tukvadze N, Shashkina E, Mathema B, Gandhi NR, Blumberg HM, Kempker RR.

Antimicrob Agents Chemother. 2017 Aug 24;61(9). pii: e01921-16. doi: 10.1128/AAC.01921-16. Print 2017 Sep.

28.

Reduced Vancomycin Susceptibility of Methicillin-Susceptible Staphylococcus aureus Has No Significant Impact on Mortality but Results in an Increase in Complicated Infection.

Sullivan SB, Austin ED, Stump S, Mathema B, Whittier S, Lowy FD, Uhlemann AC.

Antimicrob Agents Chemother. 2017 Jun 27;61(7). pii: e00316-17. doi: 10.1128/AAC.00316-17. Print 2017 Jul.

29.

Mycobacterium tuberculosis Infection among Asian Elephants in Captivity.

Simpson G, Zimmerman R, Shashkina E, Chen L, Richard M, Bradford CM, Dragoo GA, Saiers RL, Peloquin CA, Daley CL, Planet P, Narachenia A, Mathema B, Kreiswirth BN.

Emerg Infect Dis. 2017 Mar;23(3):513-516. doi: 10.3201/eid2303.160726. Erratum in: Emerg Infect Dis. 2017 Apr;23(4):724.

30.

pncA Gene Mutations Associated with Pyrazinamide Resistance in Drug-Resistant Tuberculosis, South Africa and Georgia.

Allana S, Shashkina E, Mathema B, Bablishvili N, Tukvadze N, Shah NS, Kempker RR, Blumberg HM, Moodley P, Mlisana K, Brust JC, Gandhi NR.

Emerg Infect Dis. 2017 Mar;23(3):491-495. doi: 10.3201/eid2303.161034.

31.

Multicenter Clinical and Molecular Epidemiological Analysis of Bacteremia Due to Carbapenem-Resistant Enterobacteriaceae (CRE) in the CRE Epicenter of the United States.

Satlin MJ, Chen L, Patel G, Gomez-Simmonds A, Weston G, Kim AC, Seo SK, Rosenthal ME, Sperber SJ, Jenkins SG, Hamula CL, Uhlemann AC, Levi MH, Fries BC, Tang YW, Juretschko S, Rojtman AD, Hong T, Mathema B, Jacobs MR, Walsh TJ, Bonomo RA, Kreiswirth BN.

Antimicrob Agents Chemother. 2017 Mar 24;61(4). pii: e02349-16. doi: 10.1128/AAC.02349-16. Print 2017 Apr.

32.

Transmission of Extensively Drug-Resistant Tuberculosis in South Africa.

Shah NS, Auld SC, Brust JC, Mathema B, Ismail N, Moodley P, Mlisana K, Allana S, Campbell A, Mthiyane T, Morris N, Mpangase P, van der Meulen H, Omar SV, Brown TS, Narechania A, Shaskina E, Kapwata T, Kreiswirth B, Gandhi NR.

N Engl J Med. 2017 Jan 19;376(3):243-253. doi: 10.1056/NEJMoa1604544.

33.

Genomic epidemiology of Lineage 4 Mycobacterium tuberculosis subpopulations in New York City and New Jersey, 1999-2009.

Brown TS, Narechania A, Walker JR, Planet PJ, Bifani PJ, Kolokotronis SO, Kreiswirth BN, Mathema B.

BMC Genomics. 2016 Nov 21;17(1):947.

34.

Clusterflock: a flocking algorithm for isolating congruent phylogenomic datasets.

Narechania A, Baker R, DeSalle R, Mathema B, Kolokotronis SO, Kreiswirth B, Planet PJ.

Gigascience. 2016 Oct 24;5(1):44.

35.

Architecture of a Species: Phylogenomics of Staphylococcus aureus.

Planet PJ, Narechania A, Chen L, Mathema B, Boundy S, Archer G, Kreiswirth B.

Trends Microbiol. 2017 Feb;25(2):153-166. doi: 10.1016/j.tim.2016.09.009. Epub 2016 Oct 14. Review.

PMID:
27751626
36.

Colistin- and Carbapenem-Resistant Escherichia coli Harboring mcr-1 and blaNDM-5, Causing a Complicated Urinary Tract Infection in a Patient from the United States.

Mediavilla JR, Patrawalla A, Chen L, Chavda KD, Mathema B, Vinnard C, Dever LL, Kreiswirth BN.

MBio. 2016 Aug 30;7(4). pii: e01191-16. doi: 10.1128/mBio.01191-16.

37.

Comparison of the socio-demographic and clinical features of pulmonary TB patients infected with sub-lineages within the W-Beijing and non-Beijing Mycobacterium tuberculosis.

Hu Y, Mathema B, Zhao Q, Zheng X, Li D, Jiang W, Wang W, Xu B.

Tuberculosis (Edinb). 2016 Mar;97:18-25. doi: 10.1016/j.tube.2015.11.007. Epub 2015 Dec 23.

PMID:
26980491
38.

A Novel Tool Improves Existing Estimates of Recent Tuberculosis Transmission in Settings of Sparse Data Collection.

Kasaie P, Mathema B, Kelton WD, Azman AS, Pennington J, Dowdy DW.

PLoS One. 2015 Dec 17;10(12):e0144137. doi: 10.1371/journal.pone.0144137. eCollection 2015.

39.

Acquisition of second-line drug resistance and extensive drug resistance during recent transmission of Mycobacterium tuberculosis in rural China.

Hu Y, Mathema B, Zhao Q, Chen L, Lu W, Wang W, Kreiswirth B, Xu B.

Clin Microbiol Infect. 2015 Dec;21(12):1093.e9-1093.e18. doi: 10.1016/j.cmi.2015.08.023. Epub 2015 Sep 5.

40.

High Prevalence of inhA Promoter Mutations among Patients with Drug-Resistant Tuberculosis in KwaZulu-Natal, South Africa.

Niehaus AJ, Mlisana K, Gandhi NR, Mathema B, Brust JC.

PLoS One. 2015 Sep 2;10(9):e0135003. doi: 10.1371/journal.pone.0135003. eCollection 2015.

41.

Epidemiologic Correlates of Pyrazinamide-Resistant Mycobacterium tuberculosis in New York City.

Verdugo D, Fallows D, Ahuja S, Schluger N, Kreiswirth B, Mathema B.

Antimicrob Agents Chemother. 2015 Oct;59(10):6140-50. doi: 10.1128/AAC.00764-15. Epub 2015 Jul 20.

42.

Mutations in genes for the F420 biosynthetic pathway and a nitroreductase enzyme are the primary resistance determinants in spontaneous in vitro-selected PA-824-resistant mutants of Mycobacterium tuberculosis.

Haver HL, Chua A, Ghode P, Lakshminarayana SB, Singhal A, Mathema B, Wintjens R, Bifani P.

Antimicrob Agents Chemother. 2015 Sep;59(9):5316-23. doi: 10.1128/AAC.00308-15. Epub 2015 Jun 22.

43.

Primary Capreomycin Resistance Is Common and Associated With Early Mortality in Patients With Extensively Drug-Resistant Tuberculosis in KwaZulu-Natal, South Africa.

OʼDonnell MR, Pillay M, Pillay M, Werner L, Master I, Wolf A, Mathema B, Coovadia YM, Mlisana K, Horsburgh CR, Padayatchi N.

J Acquir Immune Defic Syndr. 2015 Aug 15;69(5):536-43. doi: 10.1097/QAI.0000000000000650.

44.

Molecular epidemiology of Mycobacterium tuberculosis among South African gold miners.

Mathema B, Lewis JJ, Connors J, Chihota VN, Shashkina E, van der Meulen M, Graviss EA, Ha NP, Kreiswirth BN, Grant AD, Fielding KL, Dorman SE, Churchyard GJ.

Ann Am Thorac Soc. 2015 Jan;12(1):12-20. doi: 10.1513/AnnalsATS.201404-150OC.

45.

Reply to Yates et al.

Middelkoop K, Mathema B, Whitelaw A, Bekker LG, Wood R.

J Infect Dis. 2015 May 1;211(9):1510-1. doi: 10.1093/infdis/jiu629. Epub 2014 Nov 11. No abstract available.

46.

Carbapenemase-producing Klebsiella pneumoniae: molecular and genetic decoding.

Chen L, Mathema B, Chavda KD, DeLeo FR, Bonomo RA, Kreiswirth BN.

Trends Microbiol. 2014 Dec;22(12):686-96. doi: 10.1016/j.tim.2014.09.003. Epub 2014 Oct 7. Review.

47.

Transmission of tuberculosis in a South African community with a high prevalence of HIV infection.

Middelkoop K, Mathema B, Myer L, Shashkina E, Whitelaw A, Kaplan G, Kreiswirth B, Wood R, Bekker LG.

J Infect Dis. 2015 Jan 1;211(1):53-61. doi: 10.1093/infdis/jiu403. Epub 2014 Jul 22.

48.

Transforming the fight against tuberculosis: targeting catalysts of transmission.

Dowdy DW, Azman AS, Kendall EA, Mathema B.

Clin Infect Dis. 2014 Oct 15;59(8):1123-9. doi: 10.1093/cid/ciu506. Epub 2014 Jun 30. Review.

49.

Epidemic Klebsiella pneumoniae ST258 is a hybrid strain.

Chen L, Mathema B, Pitout JD, DeLeo FR, Kreiswirth BN.

MBio. 2014 Jun 24;5(3):e01355-14. doi: 10.1128/mBio.01355-14.

50.

Role of casual contacts in the recent transmission of tuberculosis in settings with high disease burden.

Wang W, Mathema B, Hu Y, Zhao Q, Jiang W, Xu B.

Clin Microbiol Infect. 2014 Nov;20(11):1140-5. doi: 10.1111/1469-0691.12726. Epub 2014 Jul 29.

Supplemental Content

Loading ...
Support Center