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Items: 1 to 50 of 76

1.

A new mouse model of GLUT1 deficiency syndrome exhibits abnormal sleep-wake patterns and alterations of glucose kinetics in the brain.

Furuse T, Mizuma H, Hirose Y, Kushida T, Yamada I, Miura I, Masuya H, Funato H, Yanagisawa M, Onoe H, Wakana S.

Dis Model Mech. 2019 Sep 12;12(9). pii: dmm038828. doi: 10.1242/dmm.038828.

2.

Root-endophytic Chaetomium cupreum chemically enhances aluminium tolerance in Miscanthus sinensis via increasing the aluminium detoxicants, chlorogenic acid and oosporein.

Haruma T, Yamaji K, Ogawa K, Masuya H, Sekine Y, Kozai N.

PLoS One. 2019 Feb 22;14(2):e0212644. doi: 10.1371/journal.pone.0212644. eCollection 2019.

3.

Gut bacterial and fungal communities in ground-dwelling beetles are associated with host food habit and habitat.

Kudo R, Masuya H, Endoh R, Kikuchi T, Ikeda H.

ISME J. 2019 Mar;13(3):676-685. doi: 10.1038/s41396-018-0298-3. Epub 2018 Oct 17.

PMID:
30333525
4.

Identification of genetic elements in metabolism by high-throughput mouse phenotyping.

Rozman J, Rathkolb B, Oestereicher MA, Schütt C, Ravindranath AC, Leuchtenberger S, Sharma S, Kistler M, Willershäuser M, Brommage R, Meehan TF, Mason J, Haselimashhadi H; IMPC Consortium, Hough T, Mallon AM, Wells S, Santos L, Lelliott CJ, White JK, Sorg T, Champy MF, Bower LR, Reynolds CL, Flenniken AM, Murray SA, Nutter LMJ, Svenson KL, West D, Tocchini-Valentini GP, Beaudet AL, Bosch F, Braun RB, Dobbie MS, Gao X, Herault Y, Moshiri A, Moore BA, Kent Lloyd KC, McKerlie C, Masuya H, Tanaka N, Flicek P, Parkinson HE, Sedlacek R, Seong JK, Wang CL, Moore M, Brown SD, Tschöp MH, Wurst W, Klingenspor M, Wolf E, Beckers J, Machicao F, Peter A, Staiger H, Häring HU, Grallert H, Campillos M, Maier H, Fuchs H, Gailus-Durner V, Werner T, Hrabe de Angelis M.

Nat Commun. 2018 Jan 18;9(1):288. doi: 10.1038/s41467-017-01995-2.

5.

Prevalence of sexual dimorphism in mammalian phenotypic traits.

Karp NA, Mason J, Beaudet AL, Benjamini Y, Bower L, Braun RE, Brown SDM, Chesler EJ, Dickinson ME, Flenniken AM, Fuchs H, Angelis MH, Gao X, Guo S, Greenaway S, Heller R, Herault Y, Justice MJ, Kurbatova N, Lelliott CJ, Lloyd KCK, Mallon AM, Mank JE, Masuya H, McKerlie C, Meehan TF, Mott RF, Murray SA, Parkinson H, Ramirez-Solis R, Santos L, Seavitt JR, Smedley D, Sorg T, Speak AO, Steel KP, Svenson KL; International Mouse Phenotyping Consortium, Wakana S, West D, Wells S, Westerberg H, Yaacoby S, White JK.

Nat Commun. 2017 Jun 26;8:15475. doi: 10.1038/ncomms15475.

6.

Root Fungal Endophytes Enhance Heavy-Metal Stress Tolerance of Clethra barbinervis Growing Naturally at Mining Sites via Growth Enhancement, Promotion of Nutrient Uptake and Decrease of Heavy-Metal Concentration.

Yamaji K, Watanabe Y, Masuya H, Shigeto A, Yui H, Haruma T.

PLoS One. 2016 Dec 28;11(12):e0169089. doi: 10.1371/journal.pone.0169089. eCollection 2016.

7.

Draft Genome Sequence of Raffaelea quercivora JCM 11526, a Japanese Oak Wilt Pathogen Associated with the Platypodid Beetle, Platypus quercivorus.

Masuya H, Manabe R, Ohkuma M, Endoh R.

Genome Announc. 2016 Jul 28;4(4). pii: e00755-16. doi: 10.1128/genomeA.00755-16.

8.

Real-Time PCR Detection of Dogwood Anthracnose Fungus in Historical Herbarium Specimens from Asia.

Miller S, Masuya H, Zhang J, Walsh E, Zhang N.

PLoS One. 2016 Apr 20;11(4):e0154030. doi: 10.1371/journal.pone.0154030. eCollection 2016.

9.

Endoplasmic reticulum stress-mediated apoptosis contributes to a skeletal dysplasia resembling platyspondylic lethal skeletal dysplasia, Torrance type, in a novel Col2a1 mutant mouse line.

Kimura M, Ichimura S, Sasaki K, Masuya H, Suzuki T, Wakana S, Ikegawa S, Furuichi T.

Biochem Biophys Res Commun. 2015 Dec 4-11;468(1-2):86-91. doi: 10.1016/j.bbrc.2015.10.160. Epub 2015 Nov 9.

PMID:
26545783
10.

Principles and application of LIMS in mouse clinics.

Maier H, Schütt C, Steinkamp R, Hurt A, Schneltzer E, Gormanns P, Lengger C, Griffiths M, Melvin D, Agrawal N, Alcantara R, Evans A, Gannon D, Holroyd S, Kipp C, Raj NP, Richardson D, LeBlanc S, Vasseur L, Masuya H, Kobayashi K, Suzuki T, Tanaka N, Wakana S, Walling A, Clary D, Gallegos J, Fuchs H, de Angelis MH, Gailus-Durner V.

Mamm Genome. 2015 Oct;26(9-10):467-81. doi: 10.1007/s00335-015-9586-7. Epub 2015 Jul 25. Review.

11.

Relationship between the decomposition process of coarse woody debris and fungal community structure as detected by high-throughput sequencing in a deciduous broad-leaved forest in Japan.

Yamashita S, Masuya H, Abe S, Masaki T, Okabe K.

PLoS One. 2015 Jun 25;10(6):e0131510. doi: 10.1371/journal.pone.0131510. eCollection 2015.

12.

Applying the ARRIVE Guidelines to an In Vivo Database.

Karp NA, Meehan TF, Morgan H, Mason JC, Blake A, Kurbatova N, Smedley D, Jacobsen J, Mott RF, Iyer V, Matthews P, Melvin DG, Wells S, Flenniken AM, Masuya H, Wakana S, White JK, Lloyd KC, Reynolds CL, Paylor R, West DB, Svenson KL, Chesler EJ, de Angelis MH, Tocchini-Valentini GP, Sorg T, Herault Y, Parkinson H, Mallon AM, Brown SD.

PLoS Biol. 2015 May 20;13(5):e1002151. doi: 10.1371/journal.pbio.1002151. eCollection 2015 May.

13.

Keratin subsidies promote feather decomposition via an increase in keratin-consuming arthropods and microorganisms in bird breeding colonies.

Sugiura S, Masuya H.

Naturwissenschaften. 2015 Jun;102(5-6):25. doi: 10.1007/s00114-015-1275-6. Epub 2015 Apr 24.

PMID:
25903424
14.

Comparison of Sapwood Discoloration in Fagaceae Trees After Inoculation with Isolates of Raffaelea quercivora, Cause of Mass Mortality of Japanese Oak Trees.

Kusumoto D, Masuya H, Hirao T, Goto H, Hamaguchi K, Chou WI, Suasa-Ard W, Buranapanichpan S, Uraichuen S, Kern-Asa O, Sanguansub S, Panmongkol A, Pham QT, Kahono S, Sudiana IM, Kamata N.

Plant Dis. 2015 Feb;99(2):225-230. doi: 10.1094/PDIS-06-14-0581-RE.

PMID:
30699563
15.

Novel retinoblastoma mutation abrogating the interaction to E2F2/3, but not E2F1, led to selective suppression of thyroid tumors.

Toki H, Inoue M, Minowa O, Motegi H, Saiki Y, Wakana S, Masuya H, Gondo Y, Shiroishi T, Yao R, Noda T.

Cancer Sci. 2014 Oct;105(10):1360-8. doi: 10.1111/cas.12495. Epub 2014 Sep 29.

16.

Distribution and evolution of glycoside hydrolase family 45 cellulases in nematodes and fungi.

Palomares-Rius JE, Hirooka Y, Tsai IJ, Masuya H, Hino A, Kanzaki N, Jones JT, Kikuchi T.

BMC Evol Biol. 2014 Apr 1;14:69. doi: 10.1186/1471-2148-14-69.

17.

Comparative genomics of Taphrina fungi causing varying degrees of tumorous deformity in plants.

Tsai IJ, Tanaka E, Masuya H, Tanaka R, Hirooka Y, Endoh R, Sahashi N, Kikuchi T.

Genome Biol Evol. 2014 Apr;6(4):861-72. doi: 10.1093/gbe/evu067.

18.

CLO: The cell line ontology.

Sarntivijai S, Lin Y, Xiang Z, Meehan TF, Diehl AD, Vempati UD, Schürer SC, Pang C, Malone J, Parkinson H, Liu Y, Takatsuki T, Saijo K, Masuya H, Nakamura Y, Brush MH, Haendel MA, Zheng J, Stoeckert CJ, Peters B, Mungall CJ, Carey TE, States DJ, Athey BD, He Y.

J Biomed Semantics. 2014 Aug 13;5:37. doi: 10.1186/2041-1480-5-37. eCollection 2014.

19.

Pheno-Pub: a total support system for the publication of mouse phenotypic data on the web.

Suzuki T, Furuse T, Yamada I, Motegi H, Kozawa Y, Masuya H, Wakana S.

Mamm Genome. 2013 Dec;24(11-12):473-83. doi: 10.1007/s00335-013-9482-y. Epub 2013 Nov 13.

PMID:
24220852
20.

PosMed: Ranking genes and bioresources based on Semantic Web Association Study.

Makita Y, Kobayashi N, Yoshida Y, Doi K, Mochizuki Y, Nishikata K, Matsushima A, Takahashi S, Ishii M, Takatsuki T, Bhatia R, Khadbaatar Z, Watabe H, Masuya H, Toyoda T.

Nucleic Acids Res. 2013 Jul;41(Web Server issue):W109-14. doi: 10.1093/nar/gkt474. Epub 2013 Jun 12.

21.

A novel approach of preventing Japanese cedar pollen dispersal that is the cause of Japanese cedar pollinosis (JCP) using pollen-specific fungal infection.

Hirooka Y, Akiba M, Ichihara Y, Masuya H, Takahata Y, Suda T, Yada Y, Yamamoto S, Kubono T.

PLoS One. 2013 May 7;8(5):e62875. doi: 10.1371/journal.pone.0062875. Print 2013.

22.

Novel mouse model for Gardner syndrome generated by a large-scale N-ethyl-N-nitrosourea mutagenesis program.

Toki H, Inoue M, Motegi H, Minowa O, Kanda H, Yamamoto N, Ikeda A, Karashima Y, Matsui J, Kaneda H, Miura I, Suzuki T, Wakana S, Masuya H, Gondo Y, Shiroishi T, Akiyama T, Yao R, Noda T.

Cancer Sci. 2013 Jul;104(7):937-44. doi: 10.1111/cas.12161. Epub 2013 May 18.

23.

Nematodes associated with Dryocoetes uniseriatus (Coleoptera: Scolytidae).

Shimizu A, Tanaka R, Akiba M, Masuya H, Iwata R, Fukuda K, Kanzaki N.

Environ Entomol. 2013 Feb;42(1):79-88. doi: 10.1603/EN12165.

PMID:
23339788
24.

Regional collapse of symbiotic specificity between lucanid beetles and canestriniid mites.

Okabe K, Masuya H, Kanzaki N, Taki H.

Naturwissenschaften. 2012 Nov;99(11):959-65. doi: 10.1007/s00114-012-0979-0. Epub 2012 Oct 21.

PMID:
23086393
25.
26.

Fungi associated with Scolytogenes birosimensis (Coleoptera: Curculionidae) infesting Pittosporum tobira.

Masuya H, Kajimura H, Tomisawa N, Yamaoka Y.

Environ Entomol. 2012 Apr;41(2):255-64. doi: 10.1603/EN11090.

PMID:
22506997
27.

Endophytic fungi associated with leaves of Betulaceae in Japan.

Osono T, Masuya H.

Can J Microbiol. 2012 Apr;58(4):507-15. doi: 10.1139/w2012-018. Epub 2012 Mar 27.

PMID:
22452312
28.

Behavioral and neuromorphological characterization of a novel Tuba1 mutant mouse.

Furuse T, Yamada I, Kushida T, Masuya H, Miura I, Kaneda H, Kobayashi K, Wada Y, Yuasa S, Wakana S.

Behav Brain Res. 2012 Feb 1;227(1):167-74. doi: 10.1016/j.bbr.2011.11.002. Epub 2011 Nov 11.

PMID:
22101068
29.

Symbiotic fungal flora in leaf galls induced by Illiciomyia yukawai (Diptera: Cecidomyiidae) and in its mycangia.

Kobune S, Kajimura H, Masuya H, Kubono T.

Microb Ecol. 2012 Apr;63(3):619-27. doi: 10.1007/s00248-011-9962-0. Epub 2011 Oct 21.

PMID:
22015684
30.

ENU-induced missense mutation in the C-propeptide coding region of Col2a1 creates a mouse model of platyspondylic lethal skeletal dysplasia, Torrance type.

Furuichi T, Masuya H, Murakami T, Nishida K, Nishimura G, Suzuki T, Imaizumi K, Kudo T, Ohkawa K, Wakana S, Ikegawa S.

Mamm Genome. 2011 Jun;22(5-6):318-28. doi: 10.1007/s00335-011-9329-3. Epub 2011 May 3.

PMID:
21538020
31.

The RIKEN integrated database of mammals.

Masuya H, Makita Y, Kobayashi N, Nishikata K, Yoshida Y, Mochizuki Y, Doi K, Takatsuki T, Waki K, Tanaka N, Ishii M, Matsushima A, Takahashi S, Hijikata A, Kozaki K, Furuichi T, Kawaji H, Wakana S, Nakamura Y, Yoshiki A, Murata T, Fukami-Kobayashi K, Mohan S, Ohara O, Hayashizaki Y, Mizoguchi R, Obata Y, Toyoda T.

Nucleic Acids Res. 2011 Jan;39(Database issue):D861-70. doi: 10.1093/nar/gkq1078. Epub 2010 Nov 13.

32.

ENU mutagenesis screening for dominant behavioral mutations based on normal control data obtained in home-cage activity, open-field, and passive avoidance tests.

Wada Y, Furuse T, Yamada I, Masuya H, Kushida T, Shibukawa Y, Nakai Y, Kobayashi K, Kaneda H, Gondo Y, Noda T, Shiroishi T, Wakana S.

Exp Anim. 2010;59(4):495-510.

33.

Phenotypic characterization of a new Grin1 mutant mouse generated by ENU mutagenesis.

Furuse T, Wada Y, Hattori K, Yamada I, Kushida T, Shibukawa Y, Masuya H, Kaneda H, Miura I, Seno N, Kanda T, Hirose R, Toki S, Nakanishi K, Kobayashi K, Sezutsu H, Gondo Y, Noda T, Yuasa S, Wakana S.

Eur J Neurosci. 2010 Apr;31(7):1281-91. doi: 10.1111/j.1460-9568.2010.07164.x. Epub 2010 Mar 19.

PMID:
20345915
34.

A monogenic dominant mutation in Rom1 generated by N-ethyl-N-nitrosourea mutagenesis causes retinal degeneration in mice.

Sato H, Suzuki T, Ikeda K, Masuya H, Sezutsu H, Kaneda H, Kobayashi K, Miura I, Kurihara Y, Yokokura S, Nishida K, Tamai M, Gondo Y, Noda T, Wakana S.

Mol Vis. 2010 Mar 10;16:378-91.

35.

SDOP-DB: a comparative standardized-protocol database for mouse phenotypic analyses.

Tanaka N, Waki K, Kaneda H, Suzuki T, Yamada I, Furuse T, Kobayashi K, Motegi H, Toki H, Inoue M, Minowa O, Noda T, Takao K, Miyakawa T, Takahashi A, Koide T, Wakana S, Masuya H.

Bioinformatics. 2010 Apr 15;26(8):1133-4. doi: 10.1093/bioinformatics/btq095. Epub 2010 Mar 1.

36.

Introduction to the Japan Mouse Clinic at the RIKEN BioResource Center.

Wakana S, Suzuki T, Furuse T, Kobayashi K, Miura I, Kaneda H, Yamada I, Motegi H, Toki H, Inoue M, Minowa O, Noda T, Waki K, Tanaka N, Masuya H, Obata Y.

Exp Anim. 2009 Oct;58(5):443-50. Review.

37.

PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning.

Yoshida Y, Makita Y, Heida N, Asano S, Matsushima A, Ishii M, Mochizuki Y, Masuya H, Wakana S, Kobayashi N, Toyoda T.

Nucleic Acids Res. 2009 Jul;37(Web Server issue):W147-52. doi: 10.1093/nar/gkp384. Epub 2009 May 25.

38.

An inexpensive high-throughput method to extract high yields of good quality DNA from fungi.

Kikuchi T, Karim N, Masuya H, Ota Y, Kubono T.

Mol Ecol Resour. 2009 Jan;9(1):41-5. doi: 10.1111/j.1755-0998.2008.02184.x. Epub 2008 Oct 22.

PMID:
21564564
39.

Haradamyces foliicola anam. gen. et sp. nov., a cause of zonate leaf blight disease in Cornus florida in Japan.

Masuya H, Kusunoki M, Kosaka H, Aikawa T.

Mycol Res. 2009 Feb;113(Pt 2):173-81. doi: 10.1016/j.mycres.2008.10.004. Epub 2008 Oct 26.

PMID:
19028579
40.

Identification and characterization of new long conserved noncoding sequences in vertebrates.

Sakuraba Y, Kimura T, Masuya H, Noguchi H, Sezutsu H, Takahasi KR, Toyoda A, Fukumura R, Murata T, Sakaki Y, Yamamura M, Wakana S, Noda T, Shiroishi T, Gondo Y.

Mamm Genome. 2008 Oct-Dec;19(10-12):703-12. doi: 10.1007/s00335-008-9152-7. Epub 2008 Nov 18.

PMID:
19015917
41.

Objective evaluation measures of genetic marker selection in large-scale SNP genotyping.

Kaminuma E, Masuya H, Miura I, Motegi H, Takahasi KR, Nakazawa M, Matsui M, Gondo Y, Noda T, Shiroishi T, Wakana S, Toyoda T.

J Bioinform Comput Biol. 2008 Oct;6(5):905-17.

PMID:
18942158
42.

Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project.

Taylor CF, Field D, Sansone SA, Aerts J, Apweiler R, Ashburner M, Ball CA, Binz PA, Bogue M, Booth T, Brazma A, Brinkman RR, Michael Clark A, Deutsch EW, Fiehn O, Fostel J, Ghazal P, Gibson F, Gray T, Grimes G, Hancock JM, Hardy NW, Hermjakob H, Julian RK Jr, Kane M, Kettner C, Kinsinger C, Kolker E, Kuiper M, Le Novère N, Leebens-Mack J, Lewis SE, Lord P, Mallon AM, Marthandan N, Masuya H, McNally R, Mehrle A, Morrison N, Orchard S, Quackenbush J, Reecy JM, Robertson DG, Rocca-Serra P, Rodriguez H, Rosenfelder H, Santoyo-Lopez J, Scheuermann RH, Schober D, Smith B, Snape J, Stoeckert CJ Jr, Tipton K, Sterk P, Untergasser A, Vandesompele J, Wiemann S.

Nat Biotechnol. 2008 Aug;26(8):889-96. doi: 10.1038/nbt.1411. No abstract available.

43.

Phenosite: a web database integrating the mouse phenotyping platform and the experimental procedures in mice.

Masuya H, Yoshikawa S, Heida N, Toyoda T, Wakana S, Shiroishi T.

J Bioinform Comput Biol. 2007 Dec;5(6):1173-91.

PMID:
18172924
44.

Mutations in the helix termination motif of mouse type I IRS keratin genes impair the assembly of keratin intermediate filament.

Tanaka S, Miura I, Yoshiki A, Kato Y, Yokoyama H, Shinogi A, Masuya H, Wakana S, Tamura M, Shiroishi T.

Genomics. 2007 Dec;90(6):703-11. Epub 2007 Oct 24.

45.

A novel dominant-negative mutation in Gdf5 generated by ENU mutagenesis impairs joint formation and causes osteoarthritis in mice.

Masuya H, Nishida K, Furuichi T, Toki H, Nishimura G, Kawabata H, Yokoyama H, Yoshida A, Tominaga S, Nagano J, Shimizu A, Wakana S, Gondo Y, Noda T, Shiroishi T, Ikegawa S.

Hum Mol Genet. 2007 Oct 1;16(19):2366-75. Epub 2007 Jul 26.

PMID:
17656374
46.

Mouse Phenotype Database Integration Consortium: integration [corrected] of mouse phenome data resources.

Mouse Phenotype Database Integration Consortium, Hancock JM, Adams NC, Aidinis V, Blake A, Bogue M, Brown SD, Chesler EJ, Davidson D, Duran C, Eppig JT, Gailus-Durner V, Gates H, Gkoutos GV, Greenaway S, Hrabé de Angelis M, Kollias G, Leblanc S, Lee K, Lengger C, Maier H, Mallon AM, Masuya H, Melvin DG, Müller W, Parkinson H, Proctor G, Reuveni E, Schofield P, Shukla A, Smith C, Toyoda T, Vasseur L, Wakana S, Walling A, White J, Wood J, Zouberakis M.

Mamm Genome. 2007 Mar;18(3):157-63. Epub 2007 Apr 10. Erratum in: Mamm Genome. 2007 Nov;18(11):815. Mamm Genome. 2008 Mar;19(3):219-20. multiple author names added.

47.
48.

A series of ENU-induced single-base substitutions in a long-range cis-element altering Sonic hedgehog expression in the developing mouse limb bud.

Masuya H, Sezutsu H, Sakuraba Y, Sagai T, Hosoya M, Kaneda H, Miura I, Kobayashi K, Sumiyama K, Shimizu A, Nagano J, Yokoyama H, Kaneko S, Sakurai N, Okagaki Y, Noda T, Wakana S, Gondo Y, Shiroishi T.

Genomics. 2007 Feb;89(2):207-14. Epub 2006 Oct 13.

49.

Implementation of the modified-SHIRPA protocol for screening of dominant phenotypes in a large-scale ENU mutagenesis program.

Masuya H, Inoue M, Wada Y, Shimizu A, Nagano J, Kawai A, Inoue A, Kagami T, Hirayama T, Yamaga A, Kaneda H, Kobayashi K, Minowa O, Miura I, Gondo Y, Noda T, Wakana S, Shiroishi T.

Mamm Genome. 2005 Nov;16(11):829-37. Epub 2005 Nov 11.

PMID:
16284798
50.

Molecular characterization of ENU mouse mutagenesis and archives.

Sakuraba Y, Sezutsu H, Takahasi KR, Tsuchihashi K, Ichikawa R, Fujimoto N, Kaneko S, Nakai Y, Uchiyama M, Goda N, Motoi R, Ikeda A, Karashima Y, Inoue M, Kaneda H, Masuya H, Minowa O, Noguchi H, Toyoda A, Sakaki Y, Wakana S, Noda T, Shiroishi T, Gondo Y.

Biochem Biophys Res Commun. 2005 Oct 21;336(2):609-16.

PMID:
16139793

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