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Items: 1 to 50 of 81

1.

A family AA5_2 carbohydrate oxidase from Penicillium rubens displays functional overlap across the AA5 family.

Mollerup F, Aumala V, Parikka K, Mathieu Y, Brumer H, Tenkanen M, Master E.

PLoS One. 2019 May 15;14(5):e0216546. doi: 10.1371/journal.pone.0216546. eCollection 2019.

2.

Kinetics and regioselectivity of three GH62 α-L-arabinofuranosidases from plant pathogenic fungi.

Sarch C, Suzuki H, Master ER, Wang W.

Biochim Biophys Acta Gen Subj. 2019 Jun;1863(6):1070-1078. doi: 10.1016/j.bbagen.2019.03.020. Epub 2019 Mar 30.

PMID:
30936018
3.

Evolution of substrate-specific gene expression and RNA editing in brown rot wood-decaying fungi.

Wu B, Gaskell J, Zhang J, Toapanta C, Ahrendt S, Grigoriev IV, Blanchette RA, Schilling JS, Master E, Cullen D, Hibbett DS.

ISME J. 2019 Jun;13(6):1391-1403. doi: 10.1038/s41396-019-0359-2. Epub 2019 Feb 4.

PMID:
30718807
4.

Endothelial stiffening in dyslipidemia.

Le Master E, Levitan I.

Aging (Albany NY). 2019 Jan 22;11(2):299-300. doi: 10.18632/aging.101778. No abstract available.

5.

Role of matrix metalloproteinases and histone deacetylase in oxidative stress-induced degradation of the endothelial glycocalyx.

Ali MM, Mahmoud AM, Le Master E, Levitan I, Phillips SA.

Am J Physiol Heart Circ Physiol. 2019 Mar 1;316(3):H647-H663. doi: 10.1152/ajpheart.00090.2018. Epub 2019 Jan 11.

PMID:
30632766
6.

Biocatalytic Production of Amino Carbohydrates through Oxidoreductase and Transaminase Cascades.

Aumala V, Mollerup F, Jurak E, Blume F, Karppi J, Koistinen AE, Schuiten E, Voß M, Bornscheuer U, Deska J, Master ER.

ChemSusChem. 2019 Feb 21;12(4):848-857. doi: 10.1002/cssc.201802580. Epub 2019 Jan 29.

7.

Dynamics of the Phanerochaete carnosa transcriptome during growth on aspen and spruce.

Jurak E, Suzuki H, van Erven G, Gandier JA, Wong P, Chan K, Ho CY, Gong Y, Tillier E, Rosso MN, Kabel MA, Miyauchi S, Master ER.

BMC Genomics. 2018 Nov 13;19(1):815. doi: 10.1186/s12864-018-5210-z.

8.

Analysis of the substrate specificity of α-L-arabinofuranosidases by DNA sequencer-aided fluorophore-assisted carbohydrate electrophoresis.

Maurício da Fonseca MJ, Jurak E, Kataja K, Master ER, Berrin JG, Stals I, Desmet T, Van Landschoot A, Briers Y.

Appl Microbiol Biotechnol. 2018 Dec;102(23):10091-10102. doi: 10.1007/s00253-018-9389-3. Epub 2018 Sep 28.

PMID:
30267127
9.

Comparative analysis of endothelial cell and sub-endothelial cell elastic moduli in young and aged mice: Role of CD36.

Le Master E, Fancher IS, Lee J, Levitan I.

J Biomech. 2018 Jul 25;76:263-268. doi: 10.1016/j.jbiomech.2018.06.007. Epub 2018 Jun 18.

10.

Substrate-Specific Differential Gene Expression and RNA Editing in the Brown Rot Fungus Fomitopsis pinicola.

Wu B, Gaskell J, Held BW, Toapanta C, Vuong T, Ahrendt S, Lipzen A, Zhang J, Schilling JS, Master E, Grigoriev IV, Blanchette RA, Cullen D, Hibbett DS.

Appl Environ Microbiol. 2018 Aug 1;84(16). pii: e00991-18. doi: 10.1128/AEM.00991-18. Print 2018 Aug 15.

11.

A novel acetyl xylan esterase enabling complete deacetylation of substituted xylans.

Razeq FM, Jurak E, Stogios PJ, Yan R, Tenkanen M, Kabel MA, Wang W, Master ER.

Biotechnol Biofuels. 2018 Mar 22;11:74. doi: 10.1186/s13068-018-1074-3. eCollection 2018.

12.

Chemo-enzymatic Synthesis of Clickable Xylo-oligosaccharide Monomers from Hardwood 4-O-Methylglucuronoxylan.

MacCormick B, Vuong TV, Master ER.

Biomacromolecules. 2018 Feb 12;19(2):521-530. doi: 10.1021/acs.biomac.7b01642. Epub 2018 Jan 30.

PMID:
29338223
13.

Comparative Metagenomics of Cellulose- and Poplar Hydrolysate-Degrading Microcosms from Gut Microflora of the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus) after Long-Term Enrichment.

Wong MT, Wang W, Couturier M, Razeq FM, Lombard V, Lapebie P, Edwards EA, Terrapon N, Henrissat B, Master ER.

Front Microbiol. 2017 Dec 20;8:2504. doi: 10.3389/fmicb.2017.02504. eCollection 2017.

14.
15.

Direct analysis by time-of-flight secondary ion mass spectrometry reveals action of bacterial laccase-mediator systems on both hardwood and softwood samples.

Goacher RE, Braham EJ, Michienzi CL, Flick RM, Yakunin AF, Master ER.

Physiol Plant. 2018 Sep;164(1):5-16. doi: 10.1111/ppl.12688. Epub 2018 Mar 13.

PMID:
29286544
16.

Proatherogenic Flow Increases Endothelial Stiffness via Enhanced CD36-Mediated Uptake of Oxidized Low-Density Lipoproteins.

Le Master E, Huang RT, Zhang C, Bogachkov Y, Coles C, Shentu TP, Sheng Y, Fancher IS, Ng C, Christoforidis T, Subbaiah PV, Berdyshev E, Qain Z, Eddington DT, Lee J, Cho M, Fang Y, Minshall RD, Levitan I.

Arterioscler Thromb Vasc Biol. 2018 Jan;38(1):64-75. doi: 10.1161/ATVBAHA.117.309907. Epub 2017 Oct 12.

17.

Constructing arabinofuranosidases for dual arabinoxylan debranching activity.

Wang W, Andric N, Sarch C, Silva BT, Tenkanen M, Master ER.

Biotechnol Bioeng. 2018 Jan;115(1):41-49. doi: 10.1002/bit.26445. Epub 2017 Oct 6.

PMID:
28868788
18.

Draft genome sequence of a monokaryotic model brown-rot fungus Postia (Rhodonia) placenta SB12.

Gaskell J, Kersten P, Larrondo LF, Canessa P, Martinez D, Hibbett D, Schmoll M, Kubicek CP, Martinez AT, Yadav J, Master E, Magnuson JK, Yaver D, Berka R, Lail K, Chen C, LaButti K, Nolan M, Lipzen A, Aerts A, Riley R, Barry K, Henrissat B, Blanchette R, Grigoriev IV, Cullen D.

Genom Data. 2017 Aug 10;14:21-23. doi: 10.1016/j.gdata.2017.08.003. eCollection 2017 Dec. No abstract available.

19.

A Novel Colletotrichum graminicola Raffinose Oxidase in the AA5 Family.

Andberg M, Mollerup F, Parikka K, Koutaniemi S, Boer H, Juvonen M, Master E, Tenkanen M, Kruus K.

Appl Environ Microbiol. 2017 Sep 29;83(20). pii: e01383-17. doi: 10.1128/AEM.01383-17. Print 2017 Oct 15.

20.

Action of a GH115 α-glucuronidase from Amphibacillus xylanus at alkaline condition promotes release of 4-O-methylglucopyranosyluronic acid from glucuronoxylan and arabinoglucuronoxylan.

Yan R, Vuong TV, Wang W, Master ER.

Enzyme Microb Technol. 2017 Sep;104:22-28. doi: 10.1016/j.enzmictec.2017.05.004. Epub 2017 May 24.

PMID:
28648176
21.

Erratum to: Colorimetric Detection of Acetyl Xylan Esterase Activities.

Mai-Gisondi G, Master ER.

Methods Mol Biol. 2017;1588:E1-E3. doi: 10.1007/978-1-4939-6899-2_23. No abstract available.

PMID:
28597289
22.

Functional comparison of versatile carbohydrate esterases from families CE1, CE6 and CE16 on acetyl-4-O-methylglucuronoxylan and acetyl-galactoglucomannan.

Mai-Gisondi G, Maaheimo H, Chong SL, Hinz S, Tenkanen M, Master E.

Biochim Biophys Acta Gen Subj. 2017 Sep;1861(9):2398-2405. doi: 10.1016/j.bbagen.2017.06.002. Epub 2017 Jun 4.

PMID:
28591625
23.

Enzymatically Debranched Xylans in Graft Copolymerization.

Littunen K, Mai-Gisondi G, Seppälä J, Master ER.

Biomacromolecules. 2017 May 8;18(5):1634-1641. doi: 10.1021/acs.biomac.7b00229. Epub 2017 Apr 21.

PMID:
28429930
24.

Colorimetric Detection of Acetyl Xylan Esterase Activities.

Mai-Gisondi G, Master ER.

Methods Mol Biol. 2017;1588:45-57. doi: 10.1007/978-1-4939-6899-2_5. Erratum in: Methods Mol Biol. 2017;1588:E1-E3.

PMID:
28417360
25.

Characterization of a Basidiomycota hydrophobin reveals the structural basis for a high-similarity Class I subdivision.

Gandier JA, Langelaan DN, Won A, O'Donnell K, Grondin JL, Spencer HL, Wong P, Tillier E, Yip C, Smith SP, Master ER.

Sci Rep. 2017 Apr 10;7:45863. doi: 10.1038/srep45863.

26.

Transgenic expression of fungal accessory hemicellulases in Arabidopsis thaliana triggers transcriptional patterns related to biotic stress and defense response.

Tsai AY, Chan K, Ho CY, Canam T, Capron R, Master ER, Bräutigam K.

PLoS One. 2017 Mar 2;12(3):e0173094. doi: 10.1371/journal.pone.0173094. eCollection 2017.

27.

Microplate-Based Detection of Lytic Polysaccharide Monooxygenase Activity by Fluorescence-Labeling of Insoluble Oxidized Products.

Vuong TV, Liu B, Sandgren M, Master ER.

Biomacromolecules. 2017 Feb 13;18(2):610-616. doi: 10.1021/acs.biomac.6b01790. Epub 2017 Jan 26.

PMID:
28125213
28.

Direct comparison of gluco-oligosaccharide oxidase variants and glucose oxidase: substrate range and H2O2 stability.

Vuong TV, Foumani M, MacCormick B, Kwan R, Master ER.

Sci Rep. 2016 Nov 21;6:37356. doi: 10.1038/srep37356.

29.

Substrate-Driven Convergence of the Microbial Community in Lignocellulose-Amended Enrichments of Gut Microflora from the Canadian Beaver (Castor canadensis) and North American Moose (Alces americanus).

Wong MT, Wang W, Lacourt M, Couturier M, Edwards EA, Master ER.

Front Microbiol. 2016 Jun 21;7:961. doi: 10.3389/fmicb.2016.00961. eCollection 2016.

30.

Comparative analysis of lignin peroxidase and manganese peroxidase activity on coniferous and deciduous wood using ToF-SIMS.

MacDonald J, Goacher RE, Abou-Zaid M, Master ER.

Appl Microbiol Biotechnol. 2016 Sep;100(18):8013-20. doi: 10.1007/s00253-016-7560-2. Epub 2016 May 2.

PMID:
27138198
31.

Biochemical and Structural Characterization of a Five-domain GH115 α-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.

Wang W, Yan R, Nocek BP, Vuong TV, Di Leo R, Xu X, Cui H, Gatenholm P, Toriz G, Tenkanen M, Savchenko A, Master ER.

J Biol Chem. 2016 Jul 1;291(27):14120-33. doi: 10.1074/jbc.M115.702944. Epub 2016 Apr 18.

32.

Influence of a family 29 carbohydrate binding module on the recombinant production of galactose oxidase in Pichia pastoris.

Mollerup F, Master E.

Data Brief. 2015 Nov 26;6:176-83. doi: 10.1016/j.dib.2015.11.032. eCollection 2016 Mar.

33.

Enhanced degradation of softwood versus hardwood by the white-rot fungus Pycnoporus coccineus.

Couturier M, Navarro D, Chevret D, Henrissat B, Piumi F, Ruiz-Dueñas FJ, Martinez AT, Grigoriev IV, Riley R, Lipzen A, Berrin JG, Master ER, Rosso MN.

Biotechnol Biofuels. 2015 Dec 18;8:216. doi: 10.1186/s13068-015-0407-8. eCollection 2015.

34.

Influence of a family 29 carbohydrate binding module on the activity of galactose oxidase from Fusarium graminearum.

Mollerup F, Parikka K, Vuong TV, Tenkanen M, Master E.

Biochim Biophys Acta. 2016 Feb;1860(2):354-62. doi: 10.1016/j.bbagen.2015.10.023. Epub 2015 Oct 27.

PMID:
26518347
35.

Enhancement of acetyl xylan esterase activity on cellulose acetate through fusion to a family 3 cellulose binding module.

Mai-Gisondi G, Turunen O, Pastinen O, Pahimanolis N, Master ER.

Enzyme Microb Technol. 2015 Nov;79-80:27-33. doi: 10.1016/j.enzmictec.2015.07.001. Epub 2015 Jul 9.

PMID:
26320711
36.

Continuous propionic acid production with Propionibacterium acidipropionici immobilized in a novel xylan hydrogel matrix.

Wallenius J, Pahimanolis N, Zoppe J, Kilpeläinen P, Master E, Ilvesniemi H, Seppälä J, Eerikäinen T, Ojamo H.

Bioresour Technol. 2015 Dec;197:1-6. doi: 10.1016/j.biortech.2015.08.037. Epub 2015 Aug 21.

PMID:
26313629
37.

Novel thiol- amine- and amino acid functional xylan derivatives synthesized by thiol-ene reaction.

Pahimanolis N, Kilpeläinen P, Master E, Ilvesniemi H, Seppälä J.

Carbohydr Polym. 2015 Oct 20;131:392-8. doi: 10.1016/j.carbpol.2015.06.007. Epub 2015 Jun 8.

PMID:
26256199
38.

Enhanced Polysaccharide Binding and Activity on Linear β-Glucans through Addition of Carbohydrate-Binding Modules to Either Terminus of a Glucooligosaccharide Oxidase.

Foumani M, Vuong TV, MacCormick B, Master ER.

PLoS One. 2015 May 1;10(5):e0125398. doi: 10.1371/journal.pone.0125398. eCollection 2015.

39.

In situ conversion of porphyrin microbubbles to nanoparticles for multimodality imaging.

Huynh E, Leung BY, Helfield BL, Shakiba M, Gandier JA, Jin CS, Master ER, Wilson BC, Goertz DE, Zheng G.

Nat Nanotechnol. 2015 Apr;10(4):325-32. doi: 10.1038/nnano.2015.25. Epub 2015 Mar 30.

PMID:
25822929
40.

Effect of xylan structure on reactivity in graft copolymerization and subsequent binding to cellulose.

Littunen K, Kilpeläinen P, Junka K, Sipponen M, Master ER, Seppälä J.

Biomacromolecules. 2015 Apr 13;16(4):1102-11. doi: 10.1021/bm501732b. Epub 2015 Mar 5.

PMID:
25715921
41.

Direct and up-close views of plant cell walls show a leading role for lignin-modifying enzymes on ensuing xylanases.

Jeremic D, Goacher RE, Yan R, Karunakaran C, Master ER.

Biotechnol Biofuels. 2014 Dec 31;7(1):496. doi: 10.1186/s13068-014-0176-9. eCollection 2014.

42.

Analysis of the Phlebiopsis gigantea genome, transcriptome and secretome provides insight into its pioneer colonization strategies of wood.

Hori C, Ishida T, Igarashi K, Samejima M, Suzuki H, Master E, Ferreira P, Ruiz-Dueñas FJ, Held B, Canessa P, Larrondo LF, Schmoll M, Druzhinina IS, Kubicek CP, Gaskell JA, Kersten P, St John F, Glasner J, Sabat G, Splinter BonDurant S, Syed K, Yadav J, Mgbeahuruike AC, Kovalchuk A, Asiegbu FO, Lackner G, Hoffmeister D, Rencoret J, Gutiérrez A, Sun H, Lindquist E, Barry K, Riley R, Grigoriev IV, Henrissat B, Kües U, Berka RM, Martínez AT, Covert SF, Blanchette RA, Cullen D.

PLoS Genet. 2014 Dec 4;10(12):e1004759. doi: 10.1371/journal.pgen.1004759. eCollection 2014 Dec.

43.

Debranching of soluble wheat arabinoxylan dramatically enhances recalcitrant binding to cellulose.

Selig MJ, Thygesen LG, Felby C, Master ER.

Biotechnol Lett. 2015 Mar;37(3):633-41. doi: 10.1007/s10529-014-1705-0. Epub 2014 Oct 22.

PMID:
25335745
44.

Expression of a fungal glucuronoyl esterase in Populus: effects on wood properties and saccharification efficiency.

Latha Gandla M, Derba-Maceluch M, Liu X, Gerber L, Master ER, Mellerowicz EJ, Jönsson LJ.

Phytochemistry. 2015 Apr;112:210-20. doi: 10.1016/j.phytochem.2014.06.002. Epub 2014 Jul 2.

45.

The impact of alkali pretreatment and post-pretreatment conditioning on the surface properties of rice straw affecting cellulose accessibility to cellulases.

Karuna N, Zhang L, Walton JH, Couturier M, Oztop MH, Master ER, McCarthy MJ, Jeoh T.

Bioresour Technol. 2014 Sep;167:232-40. doi: 10.1016/j.biortech.2014.05.122. Epub 2014 Jun 10.

PMID:
24983695
46.

Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 α-l-arabinofuranosidase from Streptomyces thermoviolaceus.

Wang W, Mai-Gisondi G, Stogios PJ, Kaur A, Xu X, Cui H, Turunen O, Savchenko A, Master ER.

Appl Environ Microbiol. 2014 Sep;80(17):5317-29. doi: 10.1128/AEM.00685-14. Epub 2014 Jun 20.

47.

Sequence diversity and gene expression analyses of expansin-related proteins in the white-rot basidiomycete, Phanerochaete carnosa.

Suzuki H, Vuong TV, Gong Y, Chan K, Ho CY, Master ER, Kondo A.

Fungal Genet Biol. 2014 Nov;72:115-123. doi: 10.1016/j.fgb.2014.05.008. Epub 2014 May 28.

PMID:
24880035
48.

Fusion of a xylan-binding module to gluco-oligosaccharide oxidase increases activity and promotes stable immobilization.

Vuong TV, Master ER.

PLoS One. 2014 Apr 15;9(4):e95170. doi: 10.1371/journal.pone.0095170. eCollection 2014.

49.

Advancing lignocellulose bioconversion through direct assessment of enzyme action on insoluble substrates.

Goacher RE, Selig MJ, Master ER.

Curr Opin Biotechnol. 2014 Jun;27:123-33. doi: 10.1016/j.copbio.2014.01.009. Epub 2014 Feb 11. Review.

PMID:
24525082
50.

Xylo- and cello-oligosaccharide oxidation by gluco-oligosaccharide oxidase from Sarocladium strictum and variants with reduced substrate inhibition.

Vuong TV, Vesterinen AH, Foumani M, Juvonen M, Seppälä J, Tenkanen M, Master ER.

Biotechnol Biofuels. 2013 Oct 12;6(1):148. doi: 10.1186/1754-6834-6-148.

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