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The quail genome: insights into social behaviour, seasonal biology and infectious disease response.

Morris KM, Hindle MM, Boitard S, Burt DW, Danner AF, Eory L, Forrest HL, Gourichon D, Gros J, Hillier LW, Jaffredo T, Khoury H, Lansford R, Leterrier C, Loudon A, Mason AS, Meddle SL, Minvielle F, Minx P, Pitel F, Seiler JP, Shimmura T, Tomlinson C, Vignal A, Webster RG, Yoshimura T, Warren WC, Smith J.

BMC Biol. 2020 Feb 12;18(1):14. doi: 10.1186/s12915-020-0743-4.


Assessing Diversity in the Camelina Genus Provides Insights into the Genome Structure of Camelina sativa.

Chaudhary R, Koh CS, Kagale S, Tang L, Wu SW, Lv Z, Mason AS, Sharpe AG, Diederichsen A, Parkin IAP.

G3 (Bethesda). 2020 Feb 11. pii: g3.400957.2019. doi: 10.1534/g3.119.400957. [Epub ahead of print]


Identifying Vitamin E Biosynthesis Genes in Elaeis guineensis by Genome-Wide Association Study.

Luo T, Xia W, Gong S, Mason AS, Li Z, Liu R, Dou Y, Tang W, Fan H, Zhang C, Xiao Y.

J Agric Food Chem. 2020 Jan 15;68(2):678-685. doi: 10.1021/acs.jafc.9b03832. Epub 2020 Jan 6.


MicroRNA-mRNA expression profiles and their potential role in cadmium stress response in Brassica napus.

Fu Y, Mason AS, Zhang Y, Lin B, Xiao M, Fu D, Yu H.

BMC Plant Biol. 2019 Dec 19;19(1):570. doi: 10.1186/s12870-019-2189-9.


Identification and Validation of Candidate Genes Involved in Fatty Acid Content in Oil Palm by Genome-Wide Association Analysis.

Xia W, Luo T, Dou Y, Zhang W, Mason AS, Huang D, Huang X, Tang W, Wang J, Zhang C, Xiao Y.

Front Plant Sci. 2019 Oct 15;10:1263. doi: 10.3389/fpls.2019.01263. eCollection 2019.


Reviving rare chicken breeds using genetically engineered sterility in surrogate host birds.

Woodcock ME, Gheyas AA, Mason AS, Nandi S, Taylor L, Sherman A, Smith J, Burt DW, Hawken R, McGrew MJ.

Proc Natl Acad Sci U S A. 2019 Oct 15;116(42):20930-20937. doi: 10.1073/pnas.1906316116. Epub 2019 Oct 1.


Loss of Janus Associated Kinase 1 Alters Urothelial Cell Function and Facilitates the Development of Bladder Cancer.

Daza-Cajigal V, Albuquerque AS, Pearson J, Hinley J, Mason AS, Stahlschmidt J, Thrasher AJ, Mishra V, Southgate J, Burns SO.

Front Immunol. 2019 Sep 10;10:2065. doi: 10.3389/fimmu.2019.02065. eCollection 2019.


Heritability of meiotic restitution and fertility restoration in haploid triticale.

Oleszczuk S, Grzechnik N, Mason AS, Zimny J.

Plant Cell Rep. 2019 Dec;38(12):1515-1525. doi: 10.1007/s00299-019-02462-6. Epub 2019 Aug 31.


"Doubled-haploid" allohexaploid Brassica lines lose fertility and viability and accumulate genetic variation due to genomic instability.

Mwathi MW, Schiessl SV, Batley J, Mason AS.

Chromosoma. 2019 Dec;128(4):521-532. doi: 10.1007/s00412-019-00720-w. Epub 2019 Aug 4.


Hybrids between Brassica napus and B. nigra show frequent pairing between the B and A/C genomes and resistance to blackleg.

Gaebelein R, Alnajar D, Koopmann B, Mason AS.

Chromosome Res. 2019 Sep;27(3):221-236. doi: 10.1007/s10577-019-09612-2. Epub 2019 Jul 6.


Non-coding RNAs and transposable elements in plant genomes: emergence, regulatory mechanisms and roles in plant development and stress responses.

Hou J, Lu D, Mason AS, Li B, Xiao M, An S, Fu D.

Planta. 2019 Jul;250(1):23-40. doi: 10.1007/s00425-019-03166-7. Epub 2019 Apr 16. Review.


Inherited allelic variants and novel karyotype changes influence fertility and genome stability in Brassica allohexaploids.

Gaebelein R, Schiessl SV, Samans B, Batley J, Mason AS.

New Phytol. 2019 Jul;223(2):965-978. doi: 10.1111/nph.15804. Epub 2019 Apr 24.


Specificity of the Metallothionein-1 Response by Cadmium-Exposed Normal Human Urothelial Cells.

McNeill RV, Mason AS, Hodson ME, Catto JWF, Southgate J.

Int J Mol Sci. 2019 Mar 17;20(6). pii: E1344. doi: 10.3390/ijms20061344.


Development of High-Density SNP Markers and Their Application in Evaluating Genetic Diversity and Population Structure in Elaeis guineensis.

Xia W, Luo T, Zhang W, Mason AS, Huang D, Huang X, Tang W, Dou Y, Zhang C, Xiao Y.

Front Plant Sci. 2019 Feb 12;10:130. doi: 10.3389/fpls.2019.00130. eCollection 2019.


NBS-Encoding Genes in Brassica napus Evolved Rapidly After Allopolyploidization and Co-localize With Known Disease Resistance Loci.

Fu Y, Zhang Y, Mason AS, Lin B, Zhang D, Yu H, Fu D.

Front Plant Sci. 2019 Jan 30;10:26. doi: 10.3389/fpls.2019.00026. eCollection 2019.


Broadening the bread wheat D genome.

Mirzaghaderi G, Mason AS.

Theor Appl Genet. 2019 May;132(5):1295-1307. doi: 10.1007/s00122-019-03299-z. Epub 2019 Feb 10. Review.


Genetic control of fatty acid composition in coconut (Cocos nucifera), African oil palm (Elaeis guineensis), and date palm (Phoenix dactylifera).

Xiao Y, Xia W, Mason AS, Cao Z, Fan H, Zhang B, Zhang J, Ma Z, Peng M, Huang D.

Planta. 2019 Feb;249(2):333-350. doi: 10.1007/s00425-018-3003-x. Epub 2018 Sep 7.


A quartet pollen phenotype identified in a population of Brassica interspecific hybrids shows incomplete penetrance and variable response to temperature.

Gohar M, Gäbelein R, Mason AS.

Plant Biol (Stuttg). 2018 Sep;20(5):894-901. doi: 10.1111/plb.12854. Epub 2018 Jun 25.


Genome-wide identification, putative functionality and interactions between lncRNAs and miRNAs in Brassica species.

Zhang J, Wei L, Jiang J, Mason AS, Li H, Cui C, Chai L, Zheng B, Zhu Y, Xia Q, Jiang L, Fu D.

Sci Rep. 2018 Mar 21;8(1):4960. doi: 10.1038/s41598-018-23334-1.


The long and short of doubling down: polyploidy, epigenetics, and the temporal dynamics of genome fractionation.

Wendel JF, Lisch D, Hu G, Mason AS.

Curr Opin Genet Dev. 2018 Apr;49:1-7. doi: 10.1016/j.gde.2018.01.004. Epub 2018 Feb 10. Review.


Earliness traits in rapeseed (Brassica napus): SNP loci and candidate genes identified by genome-wide association analysis.

Zhou Q, Han D, Mason AS, Zhou C, Zheng W, Li Y, Wu C, Fu D, Huang Y.

DNA Res. 2018 Jun;25(3):229-244. doi: 10.1093/dnares/dsx052. Epub 2017 Dec 11.


Correction to: Incorporating pleiotropic quantitative trait loci in dissection of complex traits: seed yield in rapeseed as an example.

Luo Z, Wang M, Long Y, Huang Y, Shi L, Zhang C, Liu X, Fitt BDL, Xiang J, Mason AS, Snowdon RJ, Liu P, Meng J, Zou J.

Theor Appl Genet. 2018 Feb;131(2):497. doi: 10.1007/s00122-017-3005-2.


Genetic changes in a novel breeding population of Brassica napus synthesized from hundreds of crosses between B. rapa and B. carinata.

Zou J, Hu D, Mason AS, Shen X, Wang X, Wang N, Grandke F, Wang M, Chang S, Snowdon RJ, Meng J.

Plant Biotechnol J. 2018 Feb;16(2):507-519. doi: 10.1111/pbi.12791. Epub 2017 Aug 16.


Revisiting Pivotal-Differential Genome Evolution in Wheat.

Mirzaghaderi G, Mason AS.

Trends Plant Sci. 2017 Aug;22(8):674-684. doi: 10.1016/j.tplants.2017.06.003. Epub 2017 Jun 22. Review.


Genome-Wide SNP Markers Based on SLAF-Seq Uncover Breeding Traces in Rapeseed (Brassica napus L.).

Zhou Q, Zhou C, Zheng W, Mason AS, Fan S, Wu C, Fu D, Huang Y.

Front Plant Sci. 2017 Apr 28;8:648. doi: 10.3389/fpls.2017.00648. eCollection 2017.


Dynamic nucleolar activity in wheat × Aegilops hybrids: evidence of C-genome dominance.

Mirzaghaderi G, Abdolmalaki Z, Zohouri M, Moradi Z, Mason AS.

Plant Cell Rep. 2017 Aug;36(8):1277-1285. doi: 10.1007/s00299-017-2152-x. Epub 2017 Apr 29.


Incorporating pleiotropic quantitative trait loci in dissection of complex traits: seed yield in rapeseed as an example.

Luo Z, Wang M, Long Y, Huang Y, Shi L, Zhang C, Liu X, Fitt BDL, Xiang J, Mason AS, Snowdon RJ, Liu P, Meng J, Zou J.

Theor Appl Genet. 2017 Aug;130(8):1569-1585. doi: 10.1007/s00122-017-2911-7. Epub 2017 Apr 28. Erratum in: Theor Appl Genet. 2017 Nov 30;:.


A user guide to the Brassica 60K Illumina Infinium™ SNP genotyping array.

Mason AS, Higgins EE, Snowdon RJ, Batley J, Stein A, Werner C, Parkin IA.

Theor Appl Genet. 2017 Apr;130(4):621-633. doi: 10.1007/s00122-016-2849-1. Epub 2017 Feb 20. Review.


Segregation for fertility and meiotic stability in novel Brassica allohexaploids.

Mwathi MW, Gupta M, Atri C, Banga SS, Batley J, Mason AS.

Theor Appl Genet. 2017 Apr;130(4):767-776. doi: 10.1007/s00122-016-2850-8. Epub 2017 Jan 17.


A New Chicken Genome Assembly Provides Insight into Avian Genome Structure.

Warren WC, Hillier LW, Tomlinson C, Minx P, Kremitzki M, Graves T, Markovic C, Bouk N, Pruitt KD, Thibaud-Nissen F, Schneider V, Mansour TA, Brown CT, Zimin A, Hawken R, Abrahamsen M, Pyrkosz AB, Morisson M, Fillon V, Vignal A, Chow W, Howe K, Fulton JE, Miller MM, Lovell P, Mello CV, Wirthlin M, Mason AS, Kuo R, Burt DW, Dodgson JB, Cheng HH.

G3 (Bethesda). 2017 Jan 5;7(1):109-117. doi: 10.1534/g3.116.035923.


Genome-Wide Identification and Transferability of Microsatellite Markers between Palmae Species.

Xiao Y, Xia W, Ma J, Mason AS, Fan H, Shi P, Lei X, Ma Z, Peng M.

Front Plant Sci. 2016 Oct 25;7:1578. eCollection 2016.


Cytogenetic and Molecular Characterization of B-Genome Introgression Lines of Brassica napus L.

Dhaliwal I, Mason AS, Banga S, Bharti S, Kaur B, Gurung AM, Salisbury PA, Batley J, Banga SS.

G3 (Bethesda). 2017 Jan 5;7(1):77-86. doi: 10.1534/g3.116.036442.


Oilseed rape: learning about ancient and recent polyploid evolution from a recent crop species.

Mason AS, Snowdon RJ.

Plant Biol (Stuttg). 2016 Nov;18(6):883-892. doi: 10.1111/plb.12462. Epub 2016 May 6. Review.


A new look at the LTR retrotransposon content of the chicken genome.

Mason AS, Fulton JE, Hocking PM, Burt DW.

BMC Genomics. 2016 Aug 30;17:688. doi: 10.1186/s12864-016-3043-1.


Small RNA changes in synthetic Brassica napus.

Fu Y, Xiao M, Yu H, Mason AS, Yin J, Li J, Zhang D, Fu D.

Planta. 2016 Sep;244(3):607-22. doi: 10.1007/s00425-016-2529-z. Epub 2016 Apr 23.


Ethnic Barriers to Utilization of Total Joint Arthroplasty Among Chinese Immigrants in the United States.

Alley MC, Mason AS, Tybor DJ, Pevear ME, Baratz MD, Smith EL.

J Arthroplasty. 2016 Sep;31(9):1873-1877.e2. doi: 10.1016/j.arth.2016.02.046. Epub 2016 Mar 3.


Molecular-cytogenetic characterization of C-genome chromosome substitution lines in Brassica juncea (L.) Czern and Coss.

Gupta M, Mason AS, Batley J, Bharti S, Banga S, Banga SS.

Theor Appl Genet. 2016 Jun;129(6):1153-66. doi: 10.1007/s00122-016-2692-4. Epub 2016 Feb 25.


Unreduced gamete formation in wheat × Aegilops spp. hybrids is genotype specific and prevented by shared homologous subgenomes.

Fakhri Z, Mirzaghaderi G, Ahmadian S, Mason AS.

Plant Cell Rep. 2016 May;35(5):1143-54. doi: 10.1007/s00299-016-1951-9. Epub 2016 Feb 16.


Identification of Putative Candidate Genes for Water Stress Tolerance in Canola (Brassica napus).

Zhang J, Mason AS, Wu J, Liu S, Zhang X, Luo T, Redden R, Batley J, Hu L, Yan G.

Front Plant Sci. 2015 Nov 27;6:1058. doi: 10.3389/fpls.2015.01058. eCollection 2015.


Centromere Locations in Brassica A and C Genomes Revealed Through Half-Tetrad Analysis.

Mason AS, Rousseau-Gueutin M, Morice J, Bayer PE, Besharat N, Cousin A, Pradhan A, Parkin IA, Chèvre AM, Batley J, Nelson MN.

Genetics. 2016 Feb;202(2):513-23. doi: 10.1534/genetics.115.183210. Epub 2015 Nov 27.


Effects of genome structure variation, homeologous genes and repetitive DNA on polyploid crop research in the age of genomics.

Fu D, Mason AS, Xiao M, Yan H.

Plant Sci. 2016 Jan;242:37-46. doi: 10.1016/j.plantsci.2015.09.017. Epub 2015 Sep 26. Review.


Genome-wide analysis reveals the extent of EAV-HP integration in domestic chicken.

Wragg D, Mason AS, Yu L, Kuo R, Lawal RA, Desta TT, Mwacharo JM, Cho CY, Kemp S, Burt DW, Hanotte O.

BMC Genomics. 2015 Oct 14;16:784. doi: 10.1186/s12864-015-1954-x.


Creating new interspecific hybrid and polyploid crops.

Mason AS, Batley J.

Trends Biotechnol. 2015 Aug;33(8):436-41. doi: 10.1016/j.tibtech.2015.06.004. Epub 2015 Jul 8. Review.


Microspore culture reveals complex meiotic behaviour in a trigenomic Brassica hybrid.

Mason AS, Takahira J, Atri C, Samans B, Hayward A, Cowling WA, Batley J, Nelson MN.

BMC Plant Biol. 2015 Jul 8;15:173. doi: 10.1186/s12870-015-0555-9.


High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus.

Bayer PE, Ruperao P, Mason AS, Stiller J, Chan CK, Hayashi S, Long Y, Meng J, Sutton T, Visendi P, Varshney RK, Batley J, Edwards D.

Theor Appl Genet. 2015 Jun;128(6):1039-47. doi: 10.1007/s00122-015-2488-y. Epub 2015 Mar 10.


High-throughput genotyping for species identification and diversity assessment in germplasm collections.

Mason AS, Zhang J, Tollenaere R, Vasquez Teuber P, Dalton-Morgan J, Hu L, Yan G, Edwards D, Redden R, Batley J.

Mol Ecol Resour. 2015 Sep;15(5):1091-101. doi: 10.1111/1755-0998.12379. Epub 2015 Feb 21.


Exploiting transcriptome data for the development and characterization of gene-based SSR markers related to cold tolerance in oil palm (Elaeis guineensis).

Xiao Y, Zhou L, Xia W, Mason AS, Yang Y, Ma Z, Peng M.

BMC Plant Biol. 2014 Dec 19;14:384. doi: 10.1186/s12870-014-0384-2.


RNA-seq analysis of oil palm under cold stress reveals a different C-repeat binding factor (CBF) mediated gene expression pattern in Elaeis guineensis compared to other species.

Lei X, Xiao Y, Xia W, Mason AS, Yang Y, Ma Z, Peng M.

PLoS One. 2014 Dec 5;9(12):e114482. doi: 10.1371/journal.pone.0114482. eCollection 2014.


Unreduced gametes: meiotic mishap or evolutionary mechanism?

Mason AS, Pires JC.

Trends Genet. 2015 Jan;31(1):5-10. doi: 10.1016/j.tig.2014.09.011. Epub 2014 Oct 16. Review.


Challenges of genotyping polyploid species.

Mason AS.

Methods Mol Biol. 2015;1245:161-8. doi: 10.1007/978-1-4939-1966-6_12. Review.


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