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Items: 32

1.

Transcriptional and Epigenetic Changes Influencing Skeletal Muscle Metabolism in Women With Polycystic Ovary Syndrome.

Nilsson E, Benrick A, Kokosar M, Krook A, Lindgren E, Källman T, Martis MM, Højlund K, Ling C, Stener-Victorin E.

J Clin Endocrinol Metab. 2018 Dec 1;103(12):4465-4477. doi: 10.1210/jc.2018-00935.

PMID:
30113663
2.

RNA-Seq de novo assembly and differential transcriptome analysis of the nematode Ascaridia galli in relation to in vivo exposure to flubendazole.

Martis MM, Tarbiat B, Tydén E, Jansson DS, Höglund J.

PLoS One. 2017 Nov 3;12(11):e0185182. doi: 10.1371/journal.pone.0185182. eCollection 2017.

3.

Anti-mycobacterial activity correlates with altered DNA methylation pattern in immune cells from BCG-vaccinated subjects.

Verma D, Parasa VR, Raffetseder J, Martis M, Mehta RB, Netea M, Lerm M.

Sci Rep. 2017 Sep 26;7(1):12305. doi: 10.1038/s41598-017-12110-2.

4.

Towards a whole-genome sequence for rye (Secale cereale L.).

Bauer E, Schmutzer T, Barilar I, Mascher M, Gundlach H, Martis MM, Twardziok SO, Hackauf B, Gordillo A, Wilde P, Schmidt M, Korzun V, Mayer KF, Schmid K, Schön CC, Scholz U.

Plant J. 2017 Mar;89(5):853-869. doi: 10.1111/tpj.13436. Epub 2017 Feb 8.

5.

The in silico identification and characterization of a bread wheat/Triticum militinae introgression line.

Abrouk M, Balcárková B, Šimková H, Komínkova E, Martis MM, Jakobson I, Timofejeva L, Rey E, Vrána J, Kilian A, Järve K, Doležel J, Valárik M.

Plant Biotechnol J. 2017 Feb;15(2):249-256. doi: 10.1111/pbi.12610. Epub 2016 Sep 16.

6.

Rye B chromosomes encode a functional Argonaute-like protein with in vitro slicer activities similar to its A chromosome paralog.

Ma W, Gabriel TS, Martis MM, Gursinsky T, Schubert V, Vrána J, Doležel J, Grundlach H, Altschmied L, Scholz U, Himmelbach A, Behrens SE, Banaei-Moghaddam AM, Houben A.

New Phytol. 2017 Jan;213(2):916-928. doi: 10.1111/nph.14110. Epub 2016 Jul 28.

7.

The distribution of α-kleisin during meiosis in the holocentromeric plant Luzula elegans.

Ma W, Schubert V, Martis MM, Hause G, Liu Z, Shen Y, Conrad U, Shi W, Scholz U, Taudien S, Cheng Z, Houben A.

Chromosome Res. 2016 Sep;24(3):393-405. doi: 10.1007/s10577-016-9529-5. Epub 2016 Jun 13.

PMID:
27294972
8.

Linkage-to-care Methods and Rates in U.S. Emergency Department-based HIV Testing Programs: A Systematic Literature Review Brief Report.

Menon AA, Nganga-Good C, Martis M, Wicken C, Lobner K, Rothman RE, Hsieh YH.

Acad Emerg Med. 2016 Jul;23(7):835-42. doi: 10.1111/acem.12987. Review.

9.

PGSB PlantsDB: updates to the database framework for comparative plant genome research.

Spannagl M, Nussbaumer T, Bader KC, Martis MM, Seidel M, Kugler KG, Gundlach H, Mayer KF.

Nucleic Acids Res. 2016 Jan 4;44(D1):D1141-7. doi: 10.1093/nar/gkv1130. Epub 2015 Nov 2.

10.

New insights into the wheat chromosome 4D structure and virtual gene order, revealed by survey pyrosequencing.

Helguera M, Rivarola M, Clavijo B, Martis MM, Vanzetti LS, González S, Garbus I, Leroy P, Šimková H, Valárik M, Caccamo M, Doležel J, Mayer KFX, Feuillet C, Tranquilli G, Paniego N, Echenique V.

Plant Sci. 2015 Apr;233:200-212. doi: 10.1016/j.plantsci.2014.12.004. Epub 2014 Dec 18.

11.

Genes on B chromosomes: old questions revisited with new tools.

Banaei-Moghaddam AM, Martis MM, Macas J, Gundlach H, Himmelbach A, Altschmied L, Mayer KF, Houben A.

Biochim Biophys Acta. 2015 Jan;1849(1):64-70. doi: 10.1016/j.bbagrm.2014.11.007. Epub 2014 Dec 3. Review.

PMID:
25481283
12.

Energy-resolved electron-yield XAS studies of nanoporous CoAlPO-18 and CoAlPO-34 catalysts.

Martis V, Martis M, Lipp J, Detollenaere D, Rayment T, Sankar G, Bras W.

J Synchrotron Radiat. 2014 Jul;21(Pt 4):744-50. doi: 10.1107/S1600577514008108. Epub 2014 May 16.

PMID:
24971969
13.

Control of physicochemical properties and catalytic activity of tris(2,2'-bipyridine)iron(II) encapsulated within the zeolite Y cavity by alkaline earth metal cations.

Martis M, Mori K, Yamashita H.

Dalton Trans. 2014 Jan 21;43(3):1132-8. doi: 10.1039/c3dt52408f. Epub 2013 Oct 29.

PMID:
24169945
14.

Reticulate evolution of the rye genome.

Martis MM, Zhou R, Haseneyer G, Schmutzer T, Vrána J, Kubaláková M, König S, Kugler KG, Scholz U, Hackauf B, Korzun V, Schön CC, Dolezel J, Bauer E, Mayer KF, Stein N.

Plant Cell. 2013 Oct;25(10):3685-98. doi: 10.1105/tpc.113.114553. Epub 2013 Oct 8.

15.

Flow sorting and sequencing meadow fescue chromosome 4F.

Kopecký D, Martis M, Číhalíková J, Hřibová E, Vrána J, Bartoš J, Kopecká J, Cattonaro F, Stočes Š, Novák P, Neumann P, Macas J, Šimková H, Studer B, Asp T, Baird JH, Navrátil P, Karafiátová M, Kubaláková M, Šafář J, Mayer K, Doležel J.

Plant Physiol. 2013 Nov;163(3):1323-37. doi: 10.1104/pp.113.224105. Epub 2013 Oct 4.

16.

Analysing complex Triticeae genomes - concepts and strategies.

Spannagl M, Martis MM, Pfeifer M, Nussbaumer T, Mayer KF.

Plant Methods. 2013 Sep 6;9(1):35. doi: 10.1186/1746-4811-9-35.

17.

Conserved synteny-based anchoring of the barley genome physical map.

Poursarebani N, Ariyadasa R, Zhou R, Schulte D, Steuernagel B, Martis MM, Graner A, Schweizer P, Scholz U, Mayer K, Stein N.

Funct Integr Genomics. 2013 Aug;13(3):339-50. doi: 10.1007/s10142-013-0327-2. Epub 2013 Jun 28.

PMID:
23812960
18.

A high density physical map of chromosome 1BL supports evolutionary studies, map-based cloning and sequencing in wheat.

Philippe R, Paux E, Bertin I, Sourdille P, Choulet F, Laugier C, Simková H, Safář J, Bellec A, Vautrin S, Frenkel Z, Cattonaro F, Magni F, Scalabrin S, Martis MM, Mayer KF, Korol A, Bergès H, Doležel J, Feuillet C.

Genome Biol. 2013 Jun 25;14(6):R64. doi: 10.1186/gb-2013-14-6-r64.

19.

Tracking the structural changes in pure and heteroatom substituted aluminophosphate, AIPO-18, using synchrotron based X-ray diffraction techniques.

Martis M, Smith AJ, Tang C, Parker JE, Hyde TI, Watson MJ, Baucherel X, Kohara S, Wakihara T, Sankar G.

Phys Chem Chem Phys. 2013 Jul 28;15(28):11766-74. doi: 10.1039/c3cp00015j.

PMID:
23752302
20.

A 4-gigabase physical map unlocks the structure and evolution of the complex genome of Aegilops tauschii, the wheat D-genome progenitor.

Luo MC, Gu YQ, You FM, Deal KR, Ma Y, Hu Y, Huo N, Wang Y, Wang J, Chen S, Jorgensen CM, Zhang Y, McGuire PE, Pasternak S, Stein JC, Ware D, Kramer M, McCombie WR, Kianian SF, Martis MM, Mayer KF, Sehgal SK, Li W, Gill BS, Bevan MW, Simková H, Dolezel J, Weining S, Lazo GR, Anderson OD, Dvorak J.

Proc Natl Acad Sci U S A. 2013 May 7;110(19):7940-5. doi: 10.1073/pnas.1219082110. Epub 2013 Apr 22.

21.

What are the active species in the photoinduced H2 production with terpyridyl Pt(II) complexes? An investigation by in situ XAFS.

Martis M, Mori K, Kato K, Sankar G, Yamashita H.

Chemphyschem. 2013 Apr 15;14(6):1122-5. doi: 10.1002/cphc.201201093. Epub 2013 Mar 6.

PMID:
23467981
22.

Genomics-based high-resolution mapping of the BaMMV/BaYMV resistance gene rym11 in barley (Hordeum vulgare L.).

Lüpken T, Stein N, Perovic D, Habekuss A, Krämer I, Hähnel U, Steuernagel B, Scholz U, Zhou R, Ariyadasa R, Taudien S, Platzer M, Martis M, Mayer K, Friedt W, Ordon F.

Theor Appl Genet. 2013 May;126(5):1201-12. doi: 10.1007/s00122-013-2047-3. Epub 2013 Mar 2.

PMID:
23456135
23.

MIPS PlantsDB: a database framework for comparative plant genome research.

Nussbaumer T, Martis MM, Roessner SK, Pfeifer M, Bader KC, Sharma S, Gundlach H, Spannagl M.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1144-51. doi: 10.1093/nar/gks1153. Epub 2012 Nov 29.

24.

The perennial ryegrass GenomeZipper: targeted use of genome resources for comparative grass genomics.

Pfeifer M, Martis M, Asp T, Mayer KF, Lübberstedt T, Byrne S, Frei U, Studer B.

Plant Physiol. 2013 Feb;161(2):571-82. doi: 10.1104/pp.112.207282. Epub 2012 Nov 26.

25.

Selfish supernumerary chromosome reveals its origin as a mosaic of host genome and organellar sequences.

Martis MM, Klemme S, Banaei-Moghaddam AM, Blattner FR, Macas J, Schmutzer T, Scholz U, Gundlach H, Wicker T, Šimková H, Novák P, Neumann P, Kubaláková M, Bauer E, Haseneyer G, Fuchs J, Doležel J, Stein N, Mayer KF, Houben A.

Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13343-6. doi: 10.1073/pnas.1204237109. Epub 2012 Jul 30.

26.

Next-generation sequencing and syntenic integration of flow-sorted arms of wheat chromosome 4A exposes the chromosome structure and gene content.

Hernandez P, Martis M, Dorado G, Pfeifer M, Gálvez S, Schaaf S, Jouve N, Šimková H, Valárik M, Doležel J, Mayer KF.

Plant J. 2012 Feb;69(3):377-86. doi: 10.1111/j.1365-313X.2011.04808.x. Epub 2011 Nov 25.

27.

Frequent gene movement and pseudogene evolution is common to the large and complex genomes of wheat, barley, and their relatives.

Wicker T, Mayer KF, Gundlach H, Martis M, Steuernagel B, Scholz U, Simková H, Kubaláková M, Choulet F, Taudien S, Platzer M, Feuillet C, Fahima T, Budak H, Dolezel J, Keller B, Stein N.

Plant Cell. 2011 May;23(5):1706-18. doi: 10.1105/tpc.111.086629. Epub 2011 May 27.

28.

Unlocking the barley genome by chromosomal and comparative genomics.

Mayer KF, Martis M, Hedley PE, Simková H, Liu H, Morris JA, Steuernagel B, Taudien S, Roessner S, Gundlach H, Kubaláková M, Suchánková P, Murat F, Felder M, Nussbaumer T, Graner A, Salse J, Endo T, Sakai H, Tanaka T, Itoh T, Sato K, Platzer M, Matsumoto T, Scholz U, Dolezel J, Waugh R, Stein N.

Plant Cell. 2011 Apr;23(4):1249-63. doi: 10.1105/tpc.110.082537. Epub 2011 Apr 5.

29.

Gene content and virtual gene order of barley chromosome 1H.

Mayer KF, Taudien S, Martis M, Simková H, Suchánková P, Gundlach H, Wicker T, Petzold A, Felder M, Steuernagel B, Scholz U, Graner A, Platzer M, Dolezel J, Stein N.

Plant Physiol. 2009 Oct;151(2):496-505. doi: 10.1104/pp.109.142612. Epub 2009 Aug 19.

30.

The Sorghum bicolor genome and the diversification of grasses.

Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob-ur-Rahman, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS.

Nature. 2009 Jan 29;457(7229):551-6. doi: 10.1038/nature07723.

PMID:
19189423
31.

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