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Items: 24

1.

Expansion of Thaumarchaeota habitat range is correlated with horizontal transfer of ATPase operons.

Wang B, Qin W, Ren Y, Zhou X, Jung MY, Han P, Eloe-Fadrosh EA, Li M, Zheng Y, Lu L, Yan X, Ji J, Liu Y, Liu L, Heiner C, Hall R, Martens-Habbena W, Herbold CW, Rhee SK, Bartlett DH, Huang L, Ingalls AE, Wagner M, Stahl DA, Jia Z.

ISME J. 2019 Aug 28. doi: 10.1038/s41396-019-0493-x. [Epub ahead of print]

PMID:
31462715
2.

Stress response of a marine ammonia-oxidizing archaeon informs physiological status of environmental populations.

Qin W, Amin SA, Lundeen RA, Heal KR, Martens-Habbena W, Turkarslan S, Urakawa H, Costa KC, Hendrickson EL, Wang T, Beck DA, Tiquia-Arashiro SM, Taub F, Holmes AD, Vajrala N, Berube PM, Lowe TM, Moffett JW, Devol AH, Baliga NS, Arp DJ, Sayavedra-Soto LA, Hackett M, Armbrust EV, Ingalls AE, Stahl DA.

ISME J. 2018 Feb;12(2):508-519. doi: 10.1038/ismej.2017.186. Epub 2017 Oct 20.

3.

Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota.

Qin W, Heal KR, Ramdasi R, Kobelt JN, Martens-Habbena W, Bertagnolli AD, Amin SA, Walker CB, Urakawa H, Könneke M, Devol AH, Moffett JW, Armbrust EV, Jensen GJ, Ingalls AE, Stahl DA.

Int J Syst Evol Microbiol. 2017 Dec;67(12):5067-5079. doi: 10.1099/ijsem.0.002416. Epub 2017 Oct 16.

PMID:
29034851
4.

Draft Genome Sequence of the Beer Spoilage Bacterium Megasphaera cerevisiae Strain PAT 1T.

Kutumbaka KK, Pasmowitz J, Mategko J, Reyes D, Friedrich A, Han S, Martens-Habbena W, Neal-McKinney J, Janagama HK, Nadala C, Samadpour M.

Genome Announc. 2015 Sep 10;3(5). pii: e01045-15. doi: 10.1128/genomeA.01045-15.

5.

The production of nitric oxide by marine ammonia-oxidizing archaea and inhibition of archaeal ammonia oxidation by a nitric oxide scavenger.

Martens-Habbena W, Qin W, Horak RE, Urakawa H, Schauer AJ, Moffett JW, Armbrust EV, Ingalls AE, Devol AH, Stahl DA.

Environ Microbiol. 2015 Jul;17(7):2261-74. doi: 10.1111/1462-2920.12677. Epub 2015 Jan 27.

PMID:
25420929
6.

Nitrosospira lacus sp. nov., a psychrotolerant, ammonia-oxidizing bacterium from sandy lake sediment.

Urakawa H, Garcia JC, Nielsen JL, Le VQ, Kozlowski JA, Stein LY, Lim CK, Pommerening-Röser A, Martens-Habbena W, Stahl DA, Klotz MG.

Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):242-50. doi: 10.1099/ijs.0.070789-0. Epub 2014 Oct 21.

PMID:
25336720
7.

Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation.

Qin W, Amin SA, Martens-Habbena W, Walker CB, Urakawa H, Devol AH, Ingalls AE, Moffett JW, Armbrust EV, Stahl DA.

Proc Natl Acad Sci U S A. 2014 Aug 26;111(34):12504-9. doi: 10.1073/pnas.1324115111. Epub 2014 Aug 11.

8.

Thermodynamic characterization of proton-ionizable functional groups on the cell surfaces of ammonia-oxidizing bacteria and archaea.

Gorman-Lewis D, Martens-Habbena W, Stahl DA.

Geobiology. 2014 Mar;12(2):157-71. doi: 10.1111/gbi.12075. Epub 2014 Jan 20.

PMID:
24589203
9.

Mapping of active replication origins in vivo in thaum- and euryarchaeal replicons.

Pelve EA, Martens-Habbena W, Stahl DA, Bernander R.

Mol Microbiol. 2013 Nov;90(3):538-50. doi: 10.1111/mmi.12382. Epub 2013 Sep 16.

10.

Hydroxylamine as an intermediate in ammonia oxidation by globally abundant marine archaea.

Vajrala N, Martens-Habbena W, Sayavedra-Soto LA, Schauer A, Bottomley PJ, Stahl DA, Arp DJ.

Proc Natl Acad Sci U S A. 2013 Jan 15;110(3):1006-11. doi: 10.1073/pnas.1214272110. Epub 2012 Dec 31.

11.

Synthesis of methylphosphonic acid by marine microbes: a source for methane in the aerobic ocean.

Metcalf WW, Griffin BM, Cicchillo RM, Gao J, Janga SC, Cooke HA, Circello BT, Evans BS, Martens-Habbena W, Stahl DA, van der Donk WA.

Science. 2012 Aug 31;337(6098):1104-7. doi: 10.1126/science.1219875.

12.

Cdv-based cell division and cell cycle organization in the thaumarchaeon Nitrosopumilus maritimus.

Pelve EA, Lindås AC, Martens-Habbena W, de la Torre JR, Stahl DA, Bernander R.

Mol Microbiol. 2011 Nov;82(3):555-66. doi: 10.1111/j.1365-2958.2011.07834.x. Epub 2011 Sep 30.

13.

Nitrogen metabolism and kinetics of ammonia-oxidizing archaea.

Martens-Habbena W, Stahl DA.

Methods Enzymol. 2011;496:465-87. doi: 10.1016/B978-0-12-386489-5.00019-1. Review.

PMID:
21514476
14.

The Moraxella catarrhalis nitric oxide reductase is essential for nitric oxide detoxification.

Wang W, Kinkel T, Martens-Habbena W, Stahl DA, Fang FC, Hansen EJ.

J Bacteriol. 2011 Jun;193(11):2804-13. doi: 10.1128/JB.00139-11. Epub 2011 Mar 25.

15.

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea.

Walker CB, de la Torre JR, Klotz MG, Urakawa H, Pinel N, Arp DJ, Brochier-Armanet C, Chain PS, Chan PP, Gollabgir A, Hemp J, Hügler M, Karr EA, Könneke M, Shin M, Lawton TJ, Lowe T, Martens-Habbena W, Sayavedra-Soto LA, Lang D, Sievert SM, Rosenzweig AC, Manning G, Stahl DA.

Proc Natl Acad Sci U S A. 2010 May 11;107(19):8818-23. doi: 10.1073/pnas.0913533107. Epub 2010 Apr 26.

16.

High abundance of ammonia-oxidizing Archaea in coastal waters, determined using a modified DNA extraction method.

Urakawa H, Martens-Habbena W, Stahl DA.

Appl Environ Microbiol. 2010 Apr;76(7):2129-35. doi: 10.1128/AEM.02692-09. Epub 2010 Jan 29.

17.

Nutrient availability as a mechanism for selection of antibiotic tolerant Pseudomonas aeruginosa within the CF airway.

Hoffman LR, Richardson AR, Houston LS, Kulasekara HD, Martens-Habbena W, Klausen M, Burns JL, Stahl DA, Hassett DJ, Fang FC, Miller SI.

PLoS Pathog. 2010 Jan 8;6(1):e1000712. doi: 10.1371/journal.ppat.1000712.

18.

Anaerobic sulfur oxidation in the absence of nitrate dominates microbial chemoautotrophy beneath the pelagic chemocline of the eastern Gotland Basin, Baltic Sea.

Jost G, Martens-Habbena W, Pollehne F, Schnetger B, Labrenz M.

FEMS Microbiol Ecol. 2010 Feb;71(2):226-36. doi: 10.1111/j.1574-6941.2009.00798.x. Epub 2009 Nov 16.

19.

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria.

Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA.

Nature. 2009 Oct 15;461(7266):976-9. doi: 10.1038/nature08465. Epub 2009 Sep 30.

PMID:
19794413
20.

Methylophilaceae link methanol oxidation to denitrification in freshwater lake sediment as suggested by stable isotope probing and pure culture analysis.

Kalyuhznaya MG, Martens-Habbena W, Wang T, Hackett M, Stolyar SM, Stahl DA, Lidstrom ME, Chistoserdova L.

Environ Microbiol Rep. 2009 Oct;1(5):385-92. doi: 10.1111/j.1758-2229.2009.00046.x. Epub 2009 Jul 16.

PMID:
23765891
21.

Identification of a repressor of a truncated denitrification pathway in Moraxella catarrhalis.

Wang W, Richardson AR, Martens-Habbena W, Stahl DA, Fang FC, Hansen EJ.

J Bacteriol. 2008 Dec;190(23):7762-72. doi: 10.1128/JB.01032-08. Epub 2008 Sep 26.

22.

Sensitive determination of microbial growth by nucleic acid staining in aqueous suspension.

Martens-Habbena W, Sass H.

Appl Environ Microbiol. 2006 Jan;72(1):87-95.

23.

Impact of different in vitro electron donor/acceptor conditions on potential chemolithoautotrophic communities from marine pelagic redoxclines.

Labrenz M, Jost G, Pohl C, Beckmann S, Martens-Habbena W, Jürgens K.

Appl Environ Microbiol. 2005 Nov;71(11):6664-72.

24.

An improved method for counting bacteria from sediments and turbid environments by epifluorescence microscopy.

Lunau M, Lemke A, Walther K, Martens-Habbena W, Simon M.

Environ Microbiol. 2005 Jul;7(7):961-8.

PMID:
15946292

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