Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 76

1.

Complex N-glycan breakdown by gut Bacteroides involves an extensive enzymatic apparatus encoded by multiple co-regulated genetic loci.

Briliūtė J, Urbanowicz PA, Luis AS, Baslé A, Paterson N, Rebello O, Hendel J, Ndeh DA, Lowe EC, Martens EC, Spencer DIR, Bolam DN, Crouch LI.

Nat Microbiol. 2019 Sep;4(9):1571-1581. doi: 10.1038/s41564-019-0466-x. Epub 2019 Jun 3.

PMID:
31160824
2.

A specific gene-microbe interaction drives the development of Crohn's disease-like colitis in mice.

Caruso R, Mathes T, Martens EC, Kamada N, Nusrat A, Inohara N, Núñez G.

Sci Immunol. 2019 Apr 19;4(34). pii: eaaw4341. doi: 10.1126/sciimmunol.aaw4341.

PMID:
31004013
3.

The human gut Firmicute Roseburia intestinalis is a primary degrader of dietary β-mannans.

La Rosa SL, Leth ML, Michalak L, Hansen ME, Pudlo NA, Glowacki R, Pereira G, Workman CT, Arntzen MØ, Pope PB, Martens EC, Hachem MA, Westereng B.

Nat Commun. 2019 Feb 22;10(1):905. doi: 10.1038/s41467-019-08812-y.

4.

Diet modulates colonic T cell responses by regulating the expression of a Bacteroides thetaiotaomicron antigen.

Wegorzewska MM, Glowacki RWP, Hsieh SA, Donermeyer DL, Hickey CA, Horvath SC, Martens EC, Stappenbeck TS, Allen PM.

Sci Immunol. 2019 Feb 8;4(32). pii: eaau9079. doi: 10.1126/sciimmunol.aau9079.

5.

Wood-Derived Dietary Fibers Promote Beneficial Human Gut Microbiota.

La Rosa SL, Kachrimanidou V, Buffetto F, Pope PB, Pudlo NA, Martens EC, Rastall RA, Gibson GR, Westereng B.

mSphere. 2019 Jan 23;4(1). pii: e00554-18. doi: 10.1128/mSphere.00554-18.

6.

Reports from a Healthy Community: The 7th Conference on Beneficial Microbes.

Mandel MJ, Broderick NA, Martens EC, Guillemin K.

Appl Environ Microbiol. 2018 Dec 21. pii: AEM.02562-18. doi: 10.1128/AEM.02562-18. [Epub ahead of print] Review.

7.

US Immigration Westernizes the Human Gut Microbiome.

Vangay P, Johnson AJ, Ward TL, Al-Ghalith GA, Shields-Cutler RR, Hillmann BM, Lucas SK, Beura LK, Thompson EA, Till LM, Batres R, Paw B, Pergament SL, Saenyakul P, Xiong M, Kim AD, Kim G, Masopust D, Martens EC, Angkurawaranon C, McGready R, Kashyap PC, Culhane-Pera KA, Knights D.

Cell. 2018 Nov 1;175(4):962-972.e10. doi: 10.1016/j.cell.2018.10.029.

8.

Interrogating gut bacterial genomes for discovery of novel carbohydrate degrading enzymes.

Luis AS, Martens EC.

Curr Opin Chem Biol. 2018 Dec;47:126-133. doi: 10.1016/j.cbpa.2018.09.012. Epub 2018 Oct 14. Review.

PMID:
30326425
9.

Bacteroides thetaiotaomicron.

Porter NT, Luis AS, Martens EC.

Trends Microbiol. 2018 Nov;26(11):966-967. doi: 10.1016/j.tim.2018.08.005. Epub 2018 Sep 4.

PMID:
30193959
10.

Interactions of commensal and pathogenic microorganisms with the intestinal mucosal barrier.

Martens EC, Neumann M, Desai MS.

Nat Rev Microbiol. 2018 Aug;16(8):457-470. doi: 10.1038/s41579-018-0036-x. Review.

PMID:
29904082
11.

How Fine Structural Differences of Xylooligosaccharides and Arabinoxylooligosaccharides Regulate Differential Growth of Bacteroides Species.

Mendis M, Martens EC, Simsek S.

J Agric Food Chem. 2018 Aug 8;66(31):8398-8405. doi: 10.1021/acs.jafc.8b01263. Epub 2018 Jul 27.

PMID:
29863342
12.

Developing a Bacteroides System for Function-Based Screening of DNA from the Human Gut Microbiome.

Lam KN, Martens EC, Charles TC.

mSystems. 2018 Mar 27;3(3). pii: e00195-17. doi: 10.1128/mSystems.00195-17. eCollection 2018 May-Jun.

13.

Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.

Pluvinage B, Grondin JM, Amundsen C, Klassen L, Moote PE, Xiao Y, Thomas D, Pudlo NA, Anele A, Martens EC, Inglis GD, Uwiera RER, Boraston AB, Abbott DW.

Nat Commun. 2018 Mar 13;9(1):1043. doi: 10.1038/s41467-018-03366-x.

14.

SusE facilitates starch uptake independent of starch binding in B. thetaiotaomicron.

Foley MH, Martens EC, Koropatkin NM.

Mol Microbiol. 2018 Jun;108(5):551-566. doi: 10.1111/mmi.13949. Epub 2018 Apr 14.

15.

Corrigendum: Complex pectin metabolism by gut bacteria reveals novel catalytic functions.

Ndeh D, Rogowski A, Cartmell A, Luis AS, Baslé A, Gray J, Venditto I, Briggs J, Zhang X, Labourel A, Terrapon N, Buffetto F, Nepogodiev S, Xiao Y, Field RA, Zhu Y, O'Neill MA, Urbanowicz BR, York WS, Davies GJ, Abbott DW, Ralet MC, Martens EC, Henrissat B, Gilbert HJ.

Nature. 2017 Aug 31;548(7669):612. doi: 10.1038/nature23659. Epub 2017 Aug 23.

PMID:
29411780
16.

Dietary pectic glycans are degraded by coordinated enzyme pathways in human colonic Bacteroides.

Luis AS, Briggs J, Zhang X, Farnell B, Ndeh D, Labourel A, Baslé A, Cartmell A, Terrapon N, Stott K, Lowe EC, McLean R, Shearer K, Schückel J, Venditto I, Ralet MC, Henrissat B, Martens EC, Mosimann SC, Abbott DW, Gilbert HJ.

Nat Microbiol. 2018 Feb;3(2):210-219. doi: 10.1038/s41564-017-0079-1. Epub 2017 Dec 18.

17.

Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.

Tamura K, Hemsworth GR, Déjean G, Rogers TE, Pudlo NA, Urs K, Jain N, Davies GJ, Martens EC, Brumer H.

Cell Rep. 2017 Nov 14;21(7):2030. doi: 10.1016/j.celrep.2017.11.013. No abstract available.

18.

Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.

Tamura K, Hemsworth GR, Déjean G, Rogers TE, Pudlo NA, Urs K, Jain N, Davies GJ, Martens EC, Brumer H.

Cell Rep. 2017 Oct 10;21(2):417-430. doi: 10.1016/j.celrep.2017.09.049. Erratum in: Cell Rep. 2017 Nov 14;21(7):2030.

19.

Reciprocal Prioritization to Dietary Glycans by Gut Bacteria in a Competitive Environment Promotes Stable Coexistence.

Tuncil YE, Xiao Y, Porter NT, Reuhs BL, Martens EC, Hamaker BR.

MBio. 2017 Oct 10;8(5). pii: e01068-17. doi: 10.1128/mBio.01068-17.

20.

A Subset of Polysaccharide Capsules in the Human Symbiont Bacteroides thetaiotaomicron Promote Increased Competitive Fitness in the Mouse Gut.

Porter NT, Canales P, Peterson DA, Martens EC.

Cell Host Microbe. 2017 Oct 11;22(4):494-506.e8. doi: 10.1016/j.chom.2017.08.020. Epub 2017 Sep 28.

21.

Meds Modify Microbiome, Mediating Their Effects.

Koropatkin NM, Martens EC.

Cell Metab. 2017 Sep 5;26(3):456-457. doi: 10.1016/j.cmet.2017.08.022.

22.

The Critical Roles of Polysaccharides in Gut Microbial Ecology and Physiology.

Porter NT, Martens EC.

Annu Rev Microbiol. 2017 Sep 8;71:349-369. doi: 10.1146/annurev-micro-102215-095316. Epub 2017 Jun 28. Review.

PMID:
28657886
23.

NLRP6 Protects Il10-/- Mice from Colitis by Limiting Colonization of Akkermansia muciniphila.

Seregin SS, Golovchenko N, Schaf B, Chen J, Pudlo NA, Mitchell J, Baxter NT, Zhao L, Schloss PD, Martens EC, Eaton KA, Chen GY.

Cell Rep. 2017 Jun 6;19(10):2174. doi: 10.1016/j.celrep.2017.05.074. No abstract available.

24.

NLRP6 Protects Il10-/- Mice from Colitis by Limiting Colonization of Akkermansia muciniphila.

Seregin SS, Golovchenko N, Schaf B, Chen J, Pudlo NA, Mitchell J, Baxter NT, Zhao L, Schloss PD, Martens EC, Eaton KA, Chen GY.

Cell Rep. 2017 Apr 25;19(4):733-745. doi: 10.1016/j.celrep.2017.03.080. Erratum in: Cell Rep. 2017 Jun 6;19(10 ):2174.

25.

Neonatal acquisition of Clostridia species protects against colonization by bacterial pathogens.

Kim YG, Sakamoto K, Seo SU, Pickard JM, Gillilland MG 3rd, Pudlo NA, Hoostal M, Li X, Wang TD, Feehley T, Stefka AT, Schmidt TM, Martens EC, Fukuda S, Inohara N, Nagler CR, Núñez G.

Science. 2017 Apr 21;356(6335):315-319. doi: 10.1126/science.aag2029.

26.

Complex pectin metabolism by gut bacteria reveals novel catalytic functions.

Ndeh D, Rogowski A, Cartmell A, Luis AS, Baslé A, Gray J, Venditto I, Briggs J, Zhang X, Labourel A, Terrapon N, Buffetto F, Nepogodiev S, Xiao Y, Field RA, Zhu Y, O'Neil MA, Urbanowicz BR, York WS, Davies GJ, Abbott DW, Ralet MC, Martens EC, Henrissat B, Gilbert HJ.

Nature. 2017 Apr 6;544(7648):65-70. doi: 10.1038/nature21725. Epub 2017 Mar 22. Erratum in: Nature. 2017 Aug 31;548(7669):612.

27.

Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A β-MANNANASE.

Bågenholm V, Reddy SK, Bouraoui H, Morrill J, Kulcinskaja E, Bahr CM, Aurelius O, Rogers T, Xiao Y, Logan DT, Martens EC, Koropatkin NM, Stålbrand H.

J Biol Chem. 2017 Jan 6;292(1):229-243. doi: 10.1074/jbc.M116.746438. Epub 2016 Nov 21.

28.

A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility.

Desai MS, Seekatz AM, Koropatkin NM, Kamada N, Hickey CA, Wolter M, Pudlo NA, Kitamoto S, Terrapon N, Muller A, Young VB, Henrissat B, Wilmes P, Stappenbeck TS, Núñez G, Martens EC.

Cell. 2016 Nov 17;167(5):1339-1353.e21. doi: 10.1016/j.cell.2016.10.043.

29.

Functional characterization of a gene locus from an uncultured gut Bacteroides conferring xylo-oligosaccharides utilization to Escherichia coli.

Tauzin AS, Laville E, Xiao Y, Nouaille S, Le Bourgeois P, Heux S, Portais JC, Monsan P, Martens EC, Potocki-Veronese G, Bordes F.

Mol Microbiol. 2016 Nov;102(4):579-592. doi: 10.1111/mmi.13480. Epub 2016 Sep 14.

30.

Development of an Integrated Pipeline for Profiling Microbial Proteins from Mouse Fecal Samples by LC-MS/MS.

Wu J, Zhu J, Yin H, Liu X, An M, Pudlo NA, Martens EC, Chen GY, Lubman DM.

J Proteome Res. 2016 Oct 7;15(10):3635-3642. Epub 2016 Sep 2.

31.

Lysozyme activity of the Ruminococcus champanellensis cellulosome.

Moraïs S, Cockburn DW, Ben-David Y, Koropatkin NM, Martens EC, Duncan SH, Flint HJ, Mizrahi I, Bayer EA.

Environ Microbiol. 2016 Dec;18(12):5112-5122. doi: 10.1111/1462-2920.13501. Epub 2016 Sep 7.

32.

A β-mannan utilization locus in Bacteroides ovatus involves a GH36 α-galactosidase active on galactomannans.

Reddy SK, Bågenholm V, Pudlo NA, Bouraoui H, Koropatkin NM, Martens EC, Stålbrand H.

FEBS Lett. 2016 Jul;590(14):2106-18. doi: 10.1002/1873-3468.12250. Epub 2016 Jun 28.

33.

Love Thy Neighbor: Sharing and Cooperativity in the Gut Microbiota.

Porter NT, Martens EC.

Cell Host Microbe. 2016 Jun 8;19(6):745-6. doi: 10.1016/j.chom.2016.05.019.

34.

Corrigendum: Glycan complexity dictates microbial resource allocation in the large intestine.

Rogowski A, Briggs JA, Mortimer JC, Tryfona T, Terrapon N, Lowe EC, Baslé A, Morland C, Day AM, Zheng H, Rogers TE, Thompson P, Hawkins AR, Yadav MP, Henrissat B, Martens EC, Dupree P, Gilbert HJ, Bolam DN.

Nat Commun. 2016 Feb 5;7:10705. doi: 10.1038/ncomms10705. No abstract available.

35.

Microbiome: Fibre for the future.

Martens EC.

Nature. 2016 Jan 14;529(7585):158-9. doi: 10.1038/529158a. No abstract available.

PMID:
26762451
36.

The Menkes and Wilson disease genes counteract in copper toxicosis in Labrador retrievers: a new canine model for copper-metabolism disorders.

Fieten H, Gill Y, Martin AJ, Concilli M, Dirksen K, van Steenbeek FG, Spee B, van den Ingh TS, Martens EC, Festa P, Chesi G, van de Sluis B, Houwen RH, Watson AL, Aulchenko YS, Hodgkinson VL, Zhu S, Petris MJ, Polishchuk RS, Leegwater PA, Rothuizen J.

Dis Model Mech. 2016 Jan;9(1):25-38. doi: 10.1242/dmm.020263.

37.

Symbiotic Human Gut Bacteria with Variable Metabolic Priorities for Host Mucosal Glycans.

Pudlo NA, Urs K, Kumar SS, German JB, Mills DA, Martens EC.

MBio. 2015 Nov 10;6(6):e01282-15. doi: 10.1128/mBio.01282-15.

38.

Coevolution of yeast mannan digestion: Convergence of the civilized human diet, distal gut microbiome, and host immunity.

Abbott DW, Martens EC, Gilbert HJ, Cuskin F, Lowe EC.

Gut Microbes. 2015;6(5):334-9. doi: 10.1080/19490976.2015.1091913.

39.

Prebiotics: why definitions matter.

Hutkins RW, Krumbeck JA, Bindels LB, Cani PD, Fahey G Jr, Goh YJ, Hamaker B, Martens EC, Mills DA, Rastal RA, Vaughan E, Sanders ME.

Curr Opin Biotechnol. 2016 Feb;37:1-7. doi: 10.1016/j.copbio.2015.09.001. Epub 2015 Sep 29. Review.

40.

Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, Ruminococcus champanellensis, reveals a fine-tuned system for cohesin-dockerin recognition.

Moraïs S, Ben David Y, Bensoussan L, Duncan SH, Koropatkin NM, Martens EC, Flint HJ, Bayer EA.

Environ Microbiol. 2016 Feb;18(2):542-56. doi: 10.1111/1462-2920.13047. Epub 2015 Oct 14.

41.

Glycan complexity dictates microbial resource allocation in the large intestine.

Rogowski A, Briggs JA, Mortimer JC, Tryfona T, Terrapon N, Lowe EC, Baslé A, Morland C, Day AM, Zheng H, Rogers TE, Thompson P, Hawkins AR, Yadav MP, Henrissat B, Martens EC, Dupree P, Gilbert HJ, Bolam DN.

Nat Commun. 2015 Jun 26;6:7481. doi: 10.1038/ncomms8481. Erratum in: Nat Commun. 2016;7:10705.

42.

Colitogenic Bacteroides thetaiotaomicron Antigens Access Host Immune Cells in a Sulfatase-Dependent Manner via Outer Membrane Vesicles.

Hickey CA, Kuhn KA, Donermeyer DL, Porter NT, Jin C, Cameron EA, Jung H, Kaiko GE, Wegorzewska M, Malvin NP, Glowacki RW, Hansson GC, Allen PM, Martens EC, Stappenbeck TS.

Cell Host Microbe. 2015 May 13;17(5):672-80. doi: 10.1016/j.chom.2015.04.002.

43.

Ruminococcal cellulosome systems from rumen to human.

Ben David Y, Dassa B, Borovok I, Lamed R, Koropatkin NM, Martens EC, White BA, Bernalier-Donadille A, Duncan SH, Flint HJ, Bayer EA, Moraïs S.

Environ Microbiol. 2015 Sep;17(9):3407-26. doi: 10.1111/1462-2920.12868. Epub 2015 May 7.

44.

Differential Metabolism of Exopolysaccharides from Probiotic Lactobacilli by the Human Gut Symbiont Bacteroides thetaiotaomicron.

Lammerts van Bueren A, Saraf A, Martens EC, Dijkhuizen L.

Appl Environ Microbiol. 2015 Jun 15;81(12):3973-83. doi: 10.1128/AEM.00149-15. Epub 2015 Apr 3.

45.

Corrigendum: Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism.

Cuskin F, Lowe EC, Temple MJ, Zhu Y, Cameron EA, Pudlo NA, Porter NT, Urs K, Thompson AJ, Cartmell A, Rogowski A, Hamilton BS, Chen R, Tolbert TJ, Piens K, Bracke D, Vervecken W, Hakki Z, Speciale G, Munōz-Munōz JL, Day A, Peña MJ, McLean R, Suits MD, Boraston AB, Atherly T, Ziemer CJ, Williams SJ, Davies GJ, Abbott DW, Martens EC, Gilbert HJ.

Nature. 2015 Apr 16;520(7547):388. doi: 10.1038/nature14334. Epub 2015 Mar 4. No abstract available.

PMID:
25739504
46.

Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism.

Cuskin F, Lowe EC, Temple MJ, Zhu Y, Cameron E, Pudlo NA, Porter NT, Urs K, Thompson AJ, Cartmell A, Rogowski A, Hamilton BS, Chen R, Tolbert TJ, Piens K, Bracke D, Vervecken W, Hakki Z, Speciale G, Munōz-Munōz JL, Day A, Peña MJ, McLean R, Suits MD, Boraston AB, Atherly T, Ziemer CJ, Williams SJ, Davies GJ, Abbott DW, Martens EC, Gilbert HJ.

Nature. 2015 Jan 8;517(7533):165-169. doi: 10.1038/nature13995. Erratum in: Nature. 2015 Apr 16;520(7547):388.

47.

Superresolution imaging captures carbohydrate utilization dynamics in human gut symbionts.

Karunatilaka KS, Cameron EA, Martens EC, Koropatkin NM, Biteen JS.

MBio. 2014 Nov 11;5(6):e02172. doi: 10.1128/mBio.02172-14.

48.

Editorial overview: insights into molecular mechanisms of microbiota.

Martens EC, Sonnenburg JL, Relman DA.

J Mol Biol. 2014 Nov 25;426(23):3827-9. doi: 10.1016/j.jmb.2014.08.021. Epub 2014 Sep 11. No abstract available.

PMID:
25218944
49.

Multifunctional nutrient-binding proteins adapt human symbiotic bacteria for glycan competition in the gut by separately promoting enhanced sensing and catalysis.

Cameron EA, Kwiatkowski KJ, Lee BH, Hamaker BR, Koropatkin NM, Martens EC.

MBio. 2014 Sep 9;5(5):e01441-14. doi: 10.1128/mBio.01441-14.

50.

The devil lies in the details: how variations in polysaccharide fine-structure impact the physiology and evolution of gut microbes.

Martens EC, Kelly AG, Tauzin AS, Brumer H.

J Mol Biol. 2014 Nov 25;426(23):3851-65. doi: 10.1016/j.jmb.2014.06.022. Epub 2014 Jul 12. Review.

Supplemental Content

Loading ...
Support Center