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Two Cases of Newly Characterized Neisseria Species, Brazil.

Mustapha MM, Lemos APS, Griffith MP, Evans DR, Marx R, Coltro ESF, Siebra CA, Timm L, Ribeiro H, Monteiro A, Pasculle AW, Marsh JW, Van Tyne D, Harrison LH, Sacchi CT.

Emerg Infect Dis. 2020 Feb;26(2):366-369. doi: 10.3201/eid2602.190191.


Early Transcriptional Landscapes of Chlamydia trachomatis-Infected Epithelial Cells at Single Cell Resolution.

Hayward RJ, Marsh JW, Humphrys MS, Huston WM, Myers GSA.

Front Cell Infect Microbiol. 2019 Nov 19;9:392. doi: 10.3389/fcimb.2019.00392. eCollection 2019.


Evolution of Outbreak-Causing Carbapenem-Resistant Klebsiella pneumoniae ST258 at a Tertiary Care Hospital over 8 Years.

Marsh JW, Mustapha MM, Griffith MP, Evans DR, Ezeonwuka C, Pasculle AW, Shutt KA, Sundermann A, Ayres AM, Shields RK, Babiker A, Cooper VS, Van Tyne D, Harrison LH.

mBio. 2019 Sep 3;10(5). pii: e01945-19. doi: 10.1128/mBio.01945-19.


Sleep problems in advanced cancer patients and their caregivers: Who is disturbing whom?

Chen Q, Terhorst L, Lowery-Allison A, Cheng H, Tsung A, Layshock M, Buysse DJ, Geller DA, Marsh JW, Wang Y, Steel JL.

J Behav Med. 2019 Aug 22. doi: 10.1007/s10865-019-00088-3. [Epub ahead of print]


Structure-activity analysis of peptidic Chlamydia HtrA inhibitors.

Agbowuro AA, Hwang J, Peel E, Mazraani R, Springwald A, Marsh JW, McCaughey L, Gamble AB, Huston WM, Tyndall JDA.

Bioorg Med Chem. 2019 Sep 15;27(18):4185-4199. doi: 10.1016/j.bmc.2019.07.049. Epub 2019 Jul 30.


Dual RNA-Seq of Chlamydia and Host Cells.

Marsh JW, Hayward RJ, Shetty A, Mahurkar A, Humphrys MS, Myers GSA.

Methods Mol Biol. 2019;2042:123-135. doi: 10.1007/978-1-4939-9694-0_9.


Outbreak of Vancomycin-resistant Enterococcus faecium in Interventional Radiology: Detection Through Whole Genome Sequencing-Based Surveillance.

Sundermann AJ, Babiker A, Marsh JW, Shutt KA, Mustapha MM, Pasculle AW, Ezeonwuka C, Saul MI, Pacey MP, Van Tyne D, Ayres AM, Cooper VS, Snyder GM, Harrison LH.

Clin Infect Dis. 2019 Jul 16. pii: ciz666. doi: 10.1093/cid/ciz666. [Epub ahead of print]


Socioeconomic disparities of depressive symptoms and cytokines in hepatocellular carcinoma.

Cheng HH, Kamarck TW, Gianaros PJ, Roecklein KA, Vanegas Y, Tsung A, Geller DA, Marsh JW, Ahmed NS, Steel JL.

Psychooncology. 2019 Aug;28(8):1624-1632. doi: 10.1002/pon.5127. Epub 2019 Jun 18.


Use of online tools for antimicrobial resistance prediction by whole-genome sequencing in methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant enterococci (VRE).

Babiker A, Mustapha MM, Pacey MP, Shutt KA, Ezeonwuka CD, Ohm SL, Cooper VS, Marsh JW, Doi Y, Harrison LH.

J Glob Antimicrob Resist. 2019 Dec;19:136-143. doi: 10.1016/j.jgar.2019.04.006. Epub 2019 Apr 18.


Integrating next-generation sequencing to endoscopic retrograde cholangiopancreatography (ERCP)-obtained biliary specimens improves the detection and management of patients with malignant bile duct strictures.

Singhi AD, Nikiforova MN, Chennat J, Papachristou GI, Khalid A, Rabinovitz M, Das R, Sarkaria S, Ayasso MS, Wald AI, Monaco SE, Nalesnik M, Ohori NP, Geller D, Tsung A, Zureikat AH, Zeh H, Marsh JW, Hogg M, Lee K, Bartlett DL, Pingpank JF, Humar A, Bahary N, Dasyam AK, Brand R, Fasanella KE, McGrath K, Slivka A.

Gut. 2020 Jan;69(1):52-61. doi: 10.1136/gutjnl-2018-317817. Epub 2019 Apr 10.


Survival after Resection of Multiple Tumor Foci of Intrahepatic Cholangiocarcinoma.

Buettner S, Ten Cate DWG, Bagante F, Alexandrescu S, Marques HP, Lamelas J, Aldrighetti L, Gamblin TC, Maithel SK, Pulitano C, Margonis GA, Weiss M, Bauer TW, Shen F, Poultsides GA, Marsh JW, IJzermans JNM, Pawlik TM, Koerkamp BG.

J Gastrointest Surg. 2019 Nov;23(11):2239-2246. doi: 10.1007/s11605-019-04184-2. Epub 2019 Mar 18.


Successful management of injuries to the portal triad: A 2019 EAST master class video presentation.

Coleman KC, Warner RL, Bardes JM, Wilson A, Inaba K, Borgstrom D, Marsh JW, Grabo DJ.

J Trauma Acute Care Surg. 2019 Jul;87(1):240-246. doi: 10.1097/TA.0000000000002253. No abstract available.


Automated data mining of the electronic health record for investigation of healthcare-associated outbreaks.

Sundermann AJ, Miller JK, Marsh JW, Saul MI, Shutt KA, Pacey M, Mustapha MM, Ayres A, Pasculle AW, Chen J, Snyder GM, Dubrawski AW, Harrison LH.

Infect Control Hosp Epidemiol. 2019 Mar;40(3):314-319. doi: 10.1017/ice.2018.343. Epub 2019 Feb 18. Erratum in: Infect Control Hosp Epidemiol. 2019 May;40(5):618.


Statistical outbreak detection by joining medical records and pathogen similarity.

Miller JK, Chen J, Sundermann A, Marsh JW, Saul MI, Shutt KA, Pacey M, Mustapha MM, Harrison LH, Dubrawski A.

J Biomed Inform. 2019 Mar;91:103126. doi: 10.1016/j.jbi.2019.103126. Epub 2019 Feb 13.


Bronchoscope-associated clusters of multidrug-resistant Pseudomonas aeruginosa and carbapenem-resistant Klebsiella pneumoniae.

Galdys AL, Marsh JW, Delgado E, Pasculle AW, Pacey M, Ayres AM, Metzger A, Harrison LH, Muto CA.

Infect Control Hosp Epidemiol. 2019 Jan;40(1):40-46. doi: 10.1017/ice.2018.263. Epub 2018 Nov 19.


Clostridioides difficile: a potential source of NpmA in the clinical environment.

Marsh JW, Pacey MP, Ezeonwuka C, Ohm SL, Snyder D, Cooper VS, Harrison LH, Doi Y, Mustapha MM.

J Antimicrob Chemother. 2019 Feb 1;74(2):521-523. doi: 10.1093/jac/dky420. No abstract available.


The impact of neutrophil-to-lymphocyte ratio and platelet-to-lymphocyte ratio among patients with intrahepatic cholangiocarcinoma.

Buettner S, Spolverato G, Kimbrough CW, Alexandrescu S, Marques HP, Lamelas J, Aldrighetti L, Gamblin TC, Maithel SK, Pulitano C, Weiss M, Bauer TW, Shen F, Poultsides GA, Marsh JW, IJzermans JNM, Koerkamp BG, Pawlik TM.

Surgery. 2018 Sep;164(3):411-418. doi: 10.1016/j.surg.2018.05.002. Epub 2018 Jun 11.


Neisseria meningitidis disease-associated clones in Amazonas State, Brazil.

Silva LA, Coronato B, Schlackman J, Marsh JW, Ezeonwuka C, Fernandes ACL, Souza VC, da Silva LS, de Amorim EFQ, Naveca FG, de Albuquerque BC, Amaral A, Souza ALS, Carvalho-Costa FA, Mustapha MM, Harrison LH, Barroso DE.

Infect Dis (Lond). 2018 Sep;50(9):697-704. doi: 10.1080/23744235.2018.1459829. Epub 2018 Apr 6.


Prospective Analyses of Cytokine Mediation of Sleep and Survival in the Context of Advanced Cancer.

Steel JL, Terhorst L, Collins KP, Geller DA, Vodovotz Y, Kim J, Krane A, Antoni M, Marsh JW, Burke LE, Butterfield LH, Penedo FJ, Buysse DJ, Tsung A.

Psychosom Med. 2018 Jun;80(5):483-491. doi: 10.1097/PSY.0000000000000579.


A radiogenomic analysis of hepatocellular carcinoma: association between fractional allelic imbalance rate index and the liver imaging reporting and data system (LI-RADS) categories and features.

Furlan A, Almusa O, Yu RK, Sagreiya H, Borhani AA, Bae KT, Marsh JW.

Br J Radiol. 2018 Jun;91(1086):20170962. doi: 10.1259/bjr.20170962. Epub 2018 Apr 4.


Laparoscopic liver resection for hepatocellular carcinoma in early and advanced cirrhosis.

Beard RE, Wang Y, Khan S, Marsh JW, Tsung A, Geller DA.

HPB (Oxford). 2018 Jun;20(6):521-529. doi: 10.1016/j.hpb.2017.11.011. Epub 2018 Jan 6.


Surgical Resection Does Not Improve Survival in Multifocal Intrahepatic Cholangiocarcinoma: A Comparison of Surgical Resection with Intra-Arterial Therapies.

Wright GP, Perkins S, Jones H, Zureikat AH, Marsh JW, Holtzman MP, Zeh HJ 3rd, Bartlett DL, Pingpank JF Jr.

Ann Surg Oncol. 2018 Jan;25(1):83-90. doi: 10.1245/s10434-017-6110-1. Epub 2017 Oct 23.


Minimally invasive liver resection for primary and metastatic liver tumors: influence of age on perioperative complications and mortality.

Sucandy I, Cheek S, Tsung A, Marsh JW, Geller DA.

Surg Endosc. 2018 Apr;32(4):1885-1891. doi: 10.1007/s00464-017-5880-7. Epub 2017 Oct 18.


A Laboratory Methodology for Dual RNA-Sequencing of Bacteria and their Host Cells In Vitro.

Marsh JW, Humphrys MS, Myers GSA.

Front Microbiol. 2017 Sep 21;8:1830. doi: 10.3389/fmicb.2017.01830. eCollection 2017.


Preoperative next-generation sequencing of pancreatic cyst fluid is highly accurate in cyst classification and detection of advanced neoplasia.

Singhi AD, McGrath K, Brand RE, Khalid A, Zeh HJ, Chennat JS, Fasanella KE, Papachristou GI, Slivka A, Bartlett DL, Dasyam AK, Hogg M, Lee KK, Marsh JW, Monaco SE, Ohori NP, Pingpank JF, Tsung A, Zureikat AH, Wald AI, Nikiforova MN.

Gut. 2018 Dec;67(12):2131-2141. doi: 10.1136/gutjnl-2016-313586. Epub 2017 Sep 28.


Pediatric liver transplantation for hepatocellular cancer and rare liver malignancies: US multicenter and single-center experience (1981-2015).

Vinayak R, Cruz RJ Jr, Ranganathan S, Mohanka R, Mazariegos G, Soltys K, Bond G, Tadros S, Humar A, Marsh JW, Selby RR, Reyes J, Sun Q, Haberman K, Sindhi R.

Liver Transpl. 2017 Dec;23(12):1577-1588. doi: 10.1002/lt.24847.


Copper(II)-bis(thiosemicarbazonato) complexes as anti-chlamydial agents.

Marsh JW, Djoko KY, McEwan AG, Huston WM.

Pathog Dis. 2017 Sep 29;75(7). doi: 10.1093/femspd/ftx084.


The Top Ten Most Treacherous Laparoscopic Cholecystectomies We Have Ever Done.

Beard RE, Ripepi AJ, Lee KW, Marsh JW, Tsung A, Geller DA.

J Gastrointest Surg. 2018 Feb;22(2):363-365. doi: 10.1007/s11605-017-3521-z. Epub 2017 Aug 7. No abstract available.


Performance of prognostic scores and staging systems in predicting long-term survival outcomes after surgery for intrahepatic cholangiocarcinoma.

Buettner S, Galjart B, van Vugt JLA, Bagante F, Alexandrescu S, Marques HP, Lamelas J, Aldrighetti L, Gamblin TC, Maithel SK, Pulitano C, Margonis GA, Weiss M, Bauer TW, Shen F, Poultsides GA, Marsh JW, IJzermans JNM, Groot Koerkamp B, Pawlik TM.

J Surg Oncol. 2017 Dec;116(8):1085-1095. doi: 10.1002/jso.24759. Epub 2017 Jul 13.


A massive hepatic tumor demonstrating hepatocellular, cholangiocarcinoma and neuroendocrine lineages: A case report and review of the literature.

Beard RE, Finkelstein SD, Borhani AA, Minervini MI, Marsh JW.

Int J Surg Case Rep. 2017;37:26-32. doi: 10.1016/j.ijscr.2017.05.039. Epub 2017 Jun 7.


CtHtrA: the lynchpin of the chlamydial surface and a promising therapeutic target.

Marsh JW, Ong VA, Lott WB, Timms P, Tyndall JD, Huston WM.

Future Microbiol. 2017 Jul;12:817-829. doi: 10.2217/fmb-2017-0017. Epub 2017 Jun 8. Review.


Bioinformatic analysis of bacteria and host cell dual RNA-sequencing experiments.

Marsh JW, Hayward RJ, Shetty AC, Mahurkar A, Humphrys MS, Myers GSA.

Brief Bioinform. 2018 Nov 27;19(6):1115-1129. doi: 10.1093/bib/bbx043.



Marsh JW, Laurier D, Tirmarche M.

Radiat Prot Dosimetry. 2017 Dec 1;177(4):466-474. doi: 10.1093/rpd/ncx065.


Beware of the interval cholecystectomy.

Ackerman J, Abegglen R, Scaife M, Peitzman A, Rosengart M, Marsh JW, Stahlfeld KR.

J Trauma Acute Care Surg. 2017 Jul;83(1):55-60. doi: 10.1097/TA.0000000000001515.


Impact of major vascular resection on outcomes and survival in patients with intrahepatic cholangiocarcinoma: A multi-institutional analysis.

Reames BN, Ejaz A, Koerkamp BG, Alexandrescu S, Marques HP, Aldrighetti L, Maithel SK, Pulitano C, Bauer TW, Shen F, Poultsides GA, Martel G, Marsh JW, Pawlik TM.

J Surg Oncol. 2017 Aug;116(2):133-139. doi: 10.1002/jso.24633. Epub 2017 Apr 15.


Sleep duration is associated with survival in advanced cancer patients.

Collins KP, Geller DA, Antoni M, Donnell DM, Tsung A, Marsh JW, Burke L, Penedo F, Terhorst L, Kamarck TW, Greene A, Buysse DJ, Steel JL.

Sleep Med. 2017 Apr;32:208-212. doi: 10.1016/j.sleep.2016.06.041. Epub 2017 Jan 20.


Invasive Haemophilus influenzae disease in the vaccine era in Rio de Janeiro, Brazil.

Tuyama M, Corrêa-Antônio J, Schlackman J, Marsh JW, Rebelo MC, Cerqueira EO, Nehab M, Kegele F, Carmo GF, Thielmann DC, Barroso PF, Harrison LH, Barroso DE.

Mem Inst Oswaldo Cruz. 2017 Mar;112(3):196-202. doi: 10.1590/0074-02760160391. Epub 2017 Feb 16.


The effect of preoperative chemotherapy treatment in surgically treated intrahepatic cholangiocarcinoma patients-A multi-institutional analysis.

Buettner S, Koerkamp BG, Ejaz A, Buisman FE, Kim Y, Margonis GA, Alexandrescu S, Marques HP, Lamelas J, Aldrighetti L, Gamblin TC, Maithel SK, Pulitano C, Bauer TW, Shen F, Poultsides GA, Marsh JW, IJzermans JN, Pawlik TM.

J Surg Oncol. 2017 Mar;115(3):312-318. doi: 10.1002/jso.24524. Epub 2017 Jan 20.


The Mayak Worker Dosimetry System (MWDS-2013): How to Weight the Absorbed Dose to Different Lung Regions in the Calculation of Lung Dose.

Birchall A, Marsh JW.

Radiat Prot Dosimetry. 2017 Nov 1;176(1-2):95-101. doi: 10.1093/rpd/ncw245.


Liver Resection After Selective Internal Radiation Therapy with Yttrium-90 is Safe and Feasible: A Bi-institutional Analysis.

Wright GP, Marsh JW, Varma MK, Doherty MG, Bartlett DL, Chung MH.

Ann Surg Oncol. 2017 Apr;24(4):906-913. doi: 10.1245/s10434-016-5697-y. Epub 2016 Nov 22.


Leukaemia mortality and low-dose ionising radiation in the WISMUT uranium miner cohort (1946-2013).

Kreuzer M, Sobotzki C, Fenske N, Marsh JW, Schnelzer M.

Occup Environ Med. 2017 Mar;74(4):252-258. doi: 10.1136/oemed-2016-103795. Epub 2016 Nov 4.


Draft Genome Sequences of Four Hospital-Associated Pseudomonas putida Isolates.

Mustapha MM, Marsh JW, Ezeonwuka CD, Pasculle AW, Pacey MP, Querry AM, Muto CA, Harrison LH.

Genome Announc. 2016 Sep 29;4(5). pii: e01039-16. doi: 10.1128/genomeA.01039-16.


Initial Treatment of Unresectable Neuroendocrine Tumor Liver Metastases with Transarterial Chemoembolization using Streptozotocin: A 20-Year Experience.

Dhir M, Shrestha R, Steel JL, Marsh JW, Tsung A, Tublin ME, Amesur NB, Orons PD, Santos E, Geller DA.

Ann Surg Oncol. 2017 Feb;24(2):450-459. doi: 10.1245/s10434-016-5591-7. Epub 2016 Sep 23.


Surgical Resection of a Leiomyosarcoma Involving Atrial Reconstruction, Cardiopulmonary Bypass, and Ex-Vivo Liver Resection and Reimplantation.

Bunting B, Marsh JW, Wei L, Hughes C, Gelzinis TA.

J Cardiothorac Vasc Anesth. 2017 Apr;31(2):637-641. doi: 10.1053/j.jvca.2016.06.019. Epub 2016 Jun 16. No abstract available.


Longterm survival outcomes of patients undergoing treatment with radiofrequency ablation for hepatocellular carcinoma and metastatic colorectal cancer liver tumors.

Sucandy I, Cheek S, Golas BJ, Tsung A, Geller DA, Marsh JW.

HPB (Oxford). 2016 Sep;18(9):756-63. doi: 10.1016/j.hpb.2016.06.010. Epub 2016 Jul 9.


Robotic and open distal pancreatectomy with celiac axis resection for locally advanced pancreatic body tumors: a single institutional assessment of perioperative outcomes and survival.

Ocuin LM, Miller-Ocuin JL, Novak SM, Bartlett DL, Marsh JW, Tsung A, Lee KK, Hogg ME, Zeh HJ, Zureikat AH.

HPB (Oxford). 2016 Oct;18(10):835-842. doi: 10.1016/j.hpb.2016.05.003. Epub 2016 Jul 8.


Alternative Lengthening of Telomeres and Loss of DAXX/ATRX Expression Predicts Metastatic Disease and Poor Survival in Patients with Pancreatic Neuroendocrine Tumors.

Singhi AD, Liu TC, Roncaioli JL, Cao D, Zeh HJ, Zureikat AH, Tsung A, Marsh JW, Lee KK, Hogg ME, Bahary N, Brand RE, McGrath KM, Slivka A, Cressman KL, Fuhrer K, O'Sullivan RJ.

Clin Cancer Res. 2017 Jan 15;23(2):600-609. doi: 10.1158/1078-0432.CCR-16-1113. Epub 2016 Jul 12.


Decrease in tumor enhancement on contrast-enhanced CT is associated with improved survival in patients with hepatocellular carcinoma treated with Sorafenib.

Patchett N, Furlan A, Marsh JW.

Jpn J Clin Oncol. 2016 Sep;46(9):839-44. doi: 10.1093/jjco/hyw078. Epub 2016 Jun 17.


Genomic Investigation Reveals Highly Conserved, Mosaic, Recombination Events Associated with Capsular Switching among Invasive Neisseria meningitidis Serogroup W Sequence Type (ST)-11 Strains.

Mustapha MM, Marsh JW, Krauland MG, Fernandez JO, de Lemos AP, Dunning Hotopp JC, Wang X, Mayer LW, Lawrence JG, Hiller NL, Harrison LH.

Genome Biol Evol. 2016 Jul 3;8(6):2065-75. doi: 10.1093/gbe/evw122.


Epidural Versus Paravertebral Nerve Block for Postoperative Analgesia in Patients Undergoing Open Liver Resection: A Randomized Clinical Trial.

Schreiber KL, Chelly JE, Lang RS, Abuelkasem E, Geller DA, Marsh JW, Tsung A, Sakai T.

Reg Anesth Pain Med. 2016 Jul-Aug;41(4):460-8. doi: 10.1097/AAP.0000000000000422.


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