Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 43

1.

High-fidelity amplified FISH for the detection and allelic discrimination of single mRNA molecules.

Marras SAE, Bushkin Y, Tyagi S.

Proc Natl Acad Sci U S A. 2019 Jul 9;116(28):13921-13926. doi: 10.1073/pnas.1814463116. Epub 2019 Jun 20.

PMID:
31221755
2.

Color-coded molecular beacons for multiplex PCR screening assays.

Marras SAE, Tyagi S, Antson DO, Kramer FR.

PLoS One. 2019 Mar 18;14(3):e0213906. doi: 10.1371/journal.pone.0213906. eCollection 2019.

3.

Suppression of Wild-Type Amplification by Selectivity Enhancing Agents in PCR Assays that Utilize SuperSelective Primers for the Detection of Rare Somatic Mutations.

Vargas DY, Marras SAE, Tyagi S, Kramer FR.

J Mol Diagn. 2018 Jul;20(4):415-427. doi: 10.1016/j.jmoldx.2018.03.004. Epub 2018 Apr 24.

4.

Detection and Differentiation of Lyme Spirochetes and Other Tick-Borne Pathogens from Blood Using Real-Time PCR with Molecular Beacons.

Schlachter S, Chan K, Marras SAE, Parveen N.

Methods Mol Biol. 2017;1616:155-170. doi: 10.1007/978-1-4939-7037-7_10.

PMID:
28600768
5.

The temporally controlled expression of Drongo, the fruit fly homolog of AGFG1, is achieved in female germline cells via P-bodies and its localization requires functional Rab11.

Catrina IE, Bayer LV, Yanez G, McLaughlin JM, Malaczek K, Bagaeva E, Marras SA, Bratu DP.

RNA Biol. 2016 Nov;13(11):1117-1132. Epub 2016 Aug 11.

6.

Multiplex Real-Time PCR Assays that Measure the Abundance of Extremely Rare Mutations Associated with Cancer.

Vargas DY, Kramer FR, Tyagi S, Marras SA.

PLoS One. 2016 May 31;11(5):e0156546. doi: 10.1371/journal.pone.0156546. eCollection 2016.

7.

An integrated biological approach to guide the development of metal-chelating inhibitors of influenza virus PA endonuclease.

Stevaert A, Nurra S, Pala N, Carcelli M, Rogolino D, Shepard C, Domaoal RA, Kim B, Alfonso-Prieto M, Marras SA, Sechi M, Naesens L.

Mol Pharmacol. 2015 Feb;87(2):323-37. doi: 10.1124/mol.114.095588. Epub 2014 Dec 4.

PMID:
25477342
8.

Sensitive multiplex PCR assay to differentiate Lyme spirochetes and emerging pathogens Anaplasma phagocytophilum and Babesia microti.

Chan K, Marras SA, Parveen N.

BMC Microbiol. 2013 Dec 20;13:295. doi: 10.1186/1471-2180-13-295.

9.

Tiny molecular beacons: LNA/2'-O-methyl RNA chimeric probes for imaging dynamic mRNA processes in living cells.

Catrina IE, Marras SA, Bratu DP.

ACS Chem Biol. 2012 Sep 21;7(9):1586-95. Epub 2012 Jul 6.

10.

New cross-linking quinoline and quinolone derivatives for sensitive fluorescent labeling.

Pillai S, Kozlov M, Marras SA, Krasnoperov LN, Mustaev A.

J Fluoresc. 2012 Jul;22(4):1021-32. doi: 10.1007/s10895-012-1039-z. Epub 2012 Mar 28.

11.

Single-molecule imaging of transcriptionally coupled and uncoupled splicing.

Vargas DY, Shah K, Batish M, Levandoski M, Sinha S, Marras SA, Schedl P, Tyagi S.

Cell. 2011 Nov 23;147(5):1054-65. doi: 10.1016/j.cell.2011.10.024.

12.

Tiny molecular beacons for in vivo mRNA detection.

Bratu DP, Catrina IE, Marras SA.

Methods Mol Biol. 2011;714:141-57. doi: 10.1007/978-1-61779-005-8_9.

PMID:
21431739
13.

Luminescent probes for ultrasensitive detection of nucleic acids.

Krasnoperov LN, Marras SA, Kozlov M, Wirpsza L, Mustaev A.

Bioconjug Chem. 2010 Feb 17;21(2):319-27. doi: 10.1021/bc900403n.

14.

Rapid universal identification of bacterial pathogens from clinical cultures by using a novel sloppy molecular beacon melting temperature signature technique.

Chakravorty S, Aladegbami B, Burday M, Levi M, Marras SA, Shah D, El-Hajj HH, Kramer FR, Alland D.

J Clin Microbiol. 2010 Jan;48(1):258-67. doi: 10.1128/JCM.01725-09. Epub 2009 Nov 18.

15.

Detection and quantification of Lyme spirochetes using sensitive and specific molecular beacon probes.

Saidac DS, Marras SA, Parveen N.

BMC Microbiol. 2009 Feb 24;9:43. doi: 10.1186/1471-2180-9-43.

16.

Use of sloppy molecular beacon probes for identification of mycobacterial species.

El-Hajj HH, Marras SA, Tyagi S, Shashkina E, Kamboj M, Kiehn TE, Glickman MS, Kramer FR, Alland D.

J Clin Microbiol. 2009 Apr;47(4):1190-8. doi: 10.1128/JCM.02043-08. Epub 2009 Jan 26.

17.

The phenolic glycolipid of Mycobacterium tuberculosis differentially modulates the early host cytokine response but does not in itself confer hypervirulence.

Sinsimer D, Huet G, Manca C, Tsenova L, Koo MS, Kurepina N, Kana B, Mathema B, Marras SA, Kreiswirth BN, Guilhot C, Kaplan G.

Infect Immun. 2008 Jul;76(7):3027-36. doi: 10.1128/IAI.01663-07. Epub 2008 Apr 28.

18.

Interactive fluorophore and quencher pairs for labeling fluorescent nucleic acid hybridization probes.

Marras SA.

Mol Biotechnol. 2008 Mar;38(3):247-55. Epub 2007 Nov 6.

PMID:
17985254
19.

Kaposi's Sarcoma-associated herpesvirus lytic switch protein stimulates DNA binding of RBP-Jk/CSL to activate the Notch pathway.

Carroll KD, Bu W, Palmeri D, Spadavecchia S, Lynch SJ, Marras SA, Tyagi S, Lukac DM.

J Virol. 2006 Oct;80(19):9697-709.

20.
21.

Mechanism of mRNA transport in the nucleus.

Vargas DY, Raj A, Marras SA, Kramer FR, Tyagi S.

Proc Natl Acad Sci U S A. 2005 Nov 22;102(47):17008-13. Epub 2005 Nov 11.

22.

Use of a multiplex molecular beacon platform for rapid detection of methicillin and vancomycin resistance in Staphylococcus aureus.

Sinsimer D, Leekha S, Park S, Marras SA, Koreen L, Willey B, Naidich S, Musser KA, Kreiswirth BN.

J Clin Microbiol. 2005 Sep;43(9):4585-91.

23.

Real-time assays with molecular beacons and other fluorescent nucleic acid hybridization probes.

Marras SA, Tyagi S, Kramer FR.

Clin Chim Acta. 2006 Jan;363(1-2):48-60. Epub 2005 Aug 18. Review.

PMID:
16111667
24.
25.

Molecular beacons for multiplex detection of four bacterial bioterrorism agents.

Varma-Basil M, El-Hajj H, Marras SA, Hazbón MH, Mann JM, Connell ND, Kramer FR, Alland D.

Clin Chem. 2004 Jun;50(6):1060-2. No abstract available.

26.

Real-time measurement of in vitro transcription.

Marras SA, Gold B, Kramer FR, Smith I, Tyagi S.

Nucleic Acids Res. 2004 May 20;32(9):e72.

27.

Multiple resistance mechanisms among Aspergillus fumigatus mutants with high-level resistance to itraconazole.

Nascimento AM, Goldman GH, Park S, Marras SA, Delmas G, Oza U, Lolans K, Dudley MN, Mann PA, Perlin DS.

Antimicrob Agents Chemother. 2003 May;47(5):1719-26.

28.

Detection of bovine leukemia virus in blood and milk by nested and real-time polymerase chain reactions.

Kuckleburg CJ, Chase CC, Nelson EA, Marras SA, Dammen MA, Christopher-Hennings J.

J Vet Diagn Invest. 2003 Jan;15(1):72-6.

PMID:
12580302
29.

Genotyping SNPs with molecular beacons.

Marras SA, Kramer FR, Tyagi S.

Methods Mol Biol. 2003;212:111-28. No abstract available.

PMID:
12491906
30.
31.

Identification and evolution of an IS6110 low-copy-number Mycobacterium tuberculosis cluster.

Mathema B, Bifani PJ, Driscoll J, Steinlein L, Kurepina N, Moghazeh SL, Shashkina E, Marras SA, Campbell S, Mangura B, Shilkret K, Crawford JT, Frothingham R, Kreiswirth BN.

J Infect Dis. 2002 Mar 1;185(5):641-9. Epub 2002 Feb 14.

PMID:
11865421
32.

Comparison of real-time, quantitative PCR with molecular beacons to nested PCR and culture methods for detection of Mycobacterium avium subsp. paratuberculosis in bovine fecal samples.

Fang Y, Wu WH, Pepper JL, Larsen JL, Marras SA, Nelson EA, Epperson WB, Christopher-Hennings J.

J Clin Microbiol. 2002 Jan;40(1):287-91.

34.

Detection of rifampin resistance in Mycobacterium tuberculosis in a single tube with molecular beacons.

El-Hajj HH, Marras SA, Tyagi S, Kramer FR, Alland D.

J Clin Microbiol. 2001 Nov;39(11):4131-7.

35.

N-methyl-D-aspartic acid receptor expression in the dorsolateral prefrontal cortex of elderly patients with schizophrenia.

Dracheva S, Marras SA, Elhakem SL, Kramer FR, Davis KL, Haroutunian V.

Am J Psychiatry. 2001 Sep;158(9):1400-10. Erratum in: Am J Psychiatry 2001 Dec;158(12):2107.

PMID:
11532724
36.

Linear 2' O-Methyl RNA probes for the visualization of RNA in living cells.

Molenaar C, Marras SA, Slats JC, Truffert JC, Lemaître M, Raap AK, Dirks RW, Tanke HJ.

Nucleic Acids Res. 2001 Sep 1;29(17):E89-9.

37.

Semiautomated clone verification by real-time PCR using molecular beacons.

van Schie RC, Marras SA, Conroy JM, Nowak NJ, Catanese JJ, de Jong PJ.

Biotechniques. 2000 Dec;29(6):1296-300, 1302-4, 1306 passim.

38.

Wavelength-shifting molecular beacons.

Tyagi S, Marras SA, Kramer FR.

Nat Biotechnol. 2000 Nov;18(11):1191-6.

PMID:
11062440
39.

Rapid identification of Candida dubliniensis using a species-specific molecular beacon.

Park S, Wong M, Marras SA, Cross EW, Kiehn TE, Chaturvedi V, Tyagi S, Perlin DS.

J Clin Microbiol. 2000 Aug;38(8):2829-36.

40.

Multiplex detection of four pathogenic retroviruses using molecular beacons.

Vet JA, Majithia AR, Marras SA, Tyagi S, Dube S, Poiesz BJ, Kramer FR.

Proc Natl Acad Sci U S A. 1999 May 25;96(11):6394-9.

41.

Multiplex detection of single-nucleotide variations using molecular beacons.

Marras SA, Kramer FR, Tyagi S.

Genet Anal. 1999 Feb;14(5-6):151-6.

PMID:
10084107
42.

Comparative analysis of p53 mutations in bladder washings and histologic specimens.

Vet JA, Hessels D, Marras SA, van de Kaa CA, van der Poel HG, Michalides RJ, Debruyne FM, Schalken JA.

Am J Clin Pathol. 1998 Nov;110(5):647-52.

PMID:
9802351
43.

Predictive value of p53 mutations analyzed in bladder washings for progression of high-risk superficial bladder cancer.

Vet JA, Witjes JA, Marras SA, Hessels D, van der Poel HG, Debruyne FM, Schalken JA.

Clin Cancer Res. 1996 Jun;2(6):1055-61.

Supplemental Content

Loading ...
Support Center