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Items: 18

1.

Molecular Dynamics Gives New Insights into the Glucose Tolerance and Inhibition Mechanisms on β-Glucosidases.

Costa LSC, Mariano DCB, Rocha REO, Kraml J, Silveira CHD, Liedl KR, de Melo-Minardi RC, Lima LHF.

Molecules. 2019 Sep 4;24(18). pii: E3215. doi: 10.3390/molecules24183215.

2.

A Computational Method to Propose Mutations in Enzymes Based on Structural Signature Variation (SSV).

Mariano DCB, Santos LH, Machado KDS, Werhli AV, de Lima LHF, de Melo-Minardi RC.

Int J Mol Sci. 2019 Jan 15;20(2). pii: E333. doi: 10.3390/ijms20020333.

3.

Transcriptome analysis of Corynebacterium pseudotuberculosis biovar Equi in two conditions of the environmental stress.

Gomide ACP, Ibraim IC, Alves JTC, de Sá PG, de Oliveira Silva YR, Santana MP, Silva WM, Folador EL, Mariano DCB, de Paula Castro TL, Barbosa S, Dorella FA, Carvalho AF, Pereira FL, Leal CAG, Figueiredo HCP, Azevedo V, Silva A, Folador ARC.

Gene. 2018 Nov 30;677:349-360. doi: 10.1016/j.gene.2018.08.028. Epub 2018 Aug 8.

PMID:
30098432
4.

SIMBA: a web tool for managing bacterial genome assembly generated by Ion PGM sequencing technology.

Mariano DC, Pereira FL, Aguiar EL, Oliveira LC, Benevides L, Guimarães LC, Folador EL, Sousa TJ, Ghosh P, Barh D, Figueiredo HC, Silva A, Ramos RT, Azevedo VA.

BMC Bioinformatics. 2016 Dec 15;17(Suppl 18):456. doi: 10.1186/s12859-016-1344-7.

5.

Complete Genome Sequence of the Attenuated Corynebacterium pseudotuberculosis Strain T1.

Almeida S, Loureiro D, Portela RW, Mariano DC, Sousa TJ, Pereira FL, Dorella FA, Carvalho AF, Moura-Costa LF, Leal CA, Figueiredo HC, Meyer R, Azevedo V.

Genome Announc. 2016 Sep 8;4(5). pii: e00947-16. doi: 10.1128/genomeA.00947-16.

6.

Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 03-8664 Isolated from a Human Throat.

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Azevedo V, Ramos RT, Silva A.

Genome Announc. 2016 Jul 28;4(4). pii: e00719-16. doi: 10.1128/genomeA.00719-16.

7.

Complete genome sequence of Streptococcus agalactiae strain GBS85147 serotype of type Ia isolated from human oropharynx.

de Aguiar EL, Mariano DC, Viana MV, Benevides Lde J, de Souza Rocha F, de Castro Oliveira L, Pereira FL, Dorella FA, Leal CA, de Carvalho AF, Santos GS, Mattos-Guaraldi AL, Nagao PE, de Castro Soares S, Hassan SS, Pinto AC, Figueiredo HC, Azevedo V.

Stand Genomic Sci. 2016 Jun 3;11:39. doi: 10.1186/s40793-016-0158-6. eCollection 2016.

8.

Whole-genome optical mapping reveals a mis-assembly between two rRNA operons of Corynebacterium pseudotuberculosis strain 1002.

Mariano DC, Sousa Tde J, Pereira FL, Aburjaile F, Barh D, Rocha F, Pinto AC, Hassan SS, Saraiva TD, Dorella FA, de Carvalho AF, Leal CA, Figueiredo HC, Silva A, Ramos RT, Azevedo VA.

BMC Genomics. 2016 Apr 30;17:315. doi: 10.1186/s12864-016-2673-7.

9.

Draft Genome Sequence of Toxigenic Corynebacterium ulcerans Strain 04-7514, Isolated from a Dog in France.

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Carneiro AR, Azevedo V, Ramos RT, Silva A.

Genome Announc. 2016 Mar 31;4(2). pii: e00172-16. doi: 10.1128/genomeA.00172-16.

10.

Draft Genome Sequence of Corynebacterium ulcerans Strain 04-3911, Isolated from Humans.

Guimarães LC, Viana MV, Benevides LJ, Mariano DC, Veras AA, Sá PH, Rocha FS, Vilas Boas PC, Soares SC, Barbosa MS, Guiso N, Badell E, Carneiro AR, Azevedo V, Ramos RT, Silva A.

Genome Announc. 2016 Mar 31;4(2). pii: e00171-16. doi: 10.1128/genomeA.00171-16.

11.

Application of In-Line Mid-Infrared (MIR) Spectroscopy Coupled with Calorimetry for the Determination of the Molar Enthalpy of Reaction between Ammonium Chloride and Sodium Nitrite.

Kartnaller V, Mariano DC, Cajaiba J.

Appl Spectrosc. 2016 Mar;70(3):531-8. doi: 10.1177/0003702815626682. Epub 2016 Jan 21.

PMID:
26798078
12.

MapRepeat: an approach for effective assembly of repetitive regions in prokaryotic genomes.

Mariano DC, Pereira FL, Ghosh P, Barh D, Figueiredo HC, Silva A, Ramos RT, Azevedo VA.

Bioinformation. 2015 Jun 30;11(6):276-9. doi: 10.6026/97320630011276. eCollection 2015.

13.

Genome Sequence of Corynebacterium ulcerans Strain FRC11.

Benevides Lde J, Viana MV, Mariano DC, Rocha Fde S, Bagano PC, Folador EL, Pereira FL, Dorella FA, Leal CA, Carvalho AF, Soares Sde C, Carneiro A, Ramos R, Badell-Ocando E, Guiso N, Silva A, Figueiredo H, Azevedo V, Guimarães LC.

Genome Announc. 2015 Mar 12;3(2). pii: e00112-15. doi: 10.1128/genomeA.00112-15.

14.

Genome Sequence of Lactococcus lactis subsp. lactis NCDO 2118, a GABA-Producing Strain.

Oliveira LC, Saraiva TD, Soares SC, Ramos RT, Sá PH, Carneiro AR, Miranda F, Freire M, Renan W, Júnior AF, Santos AR, Pinto AC, Souza BM, Castro CP, Diniz CA, Rocha CS, Mariano DC, de Aguiar EL, Folador EL, Barbosa EG, Aburjaile FF, Gonçalves LA, Guimarães LC, Azevedo M, Agresti PC, Silva RF, Tiwari S, Almeida SS, Hassan SS, Pereira VB, Abreu VA, Pereira UP, Dorella FA, Carvalho AF, Pereira FL, Leal CA, Figueiredo HC, Silva A, Miyoshi A, Azevedo V.

Genome Announc. 2014 Oct 2;2(5). pii: e00980-14. doi: 10.1128/genomeA.00980-14.

15.

Characterization of glucose-tolerant β-glucosidases used in biofuel production under the bioinformatics perspective: a systematic review.

Mariano DCB, Leite C, Santos LHS, Marins LF, Machado KS, Werhli AV, Lima LHF, de Melo-Minardi RC.

Genet Mol Res. 2014 Aug 17;16(3). doi: 10.4238/gmr16039740.

PMID:
28829906
16.

Characterization of rhamnolipids produced by wild-type and engineered Burkholderia kururiensis.

Tavares LF, Silva PM, Junqueira M, Mariano DC, Nogueira FC, Domont GB, Freire DM, Neves BC.

Appl Microbiol Biotechnol. 2013 Mar;97(5):1909-21. doi: 10.1007/s00253-012-4454-9. Epub 2012 Oct 10.

PMID:
23053103
17.

Obstructive sleep apnea is frequent in patients with hypertensive intracerebral hemorrhage and is related to perihematoma edema.

Pontes-Neto OM, Fernandes RM, Sander HH, da Silva LA, Mariano DC, Nobre F, Simão G, de Araujo DB, dos Santos AC, Leite JP.

Cerebrovasc Dis. 2010;29(1):36-42. doi: 10.1159/000255972. Epub 2009 Nov 5.

PMID:
19893310
18.

Validation of the National Institutes of Health Stroke Scale, modified Rankin Scale and Barthel Index in Brazil: the role of cultural adaptation and structured interviewing.

Cincura C, Pontes-Neto OM, Neville IS, Mendes HF, Menezes DF, Mariano DC, Pereira IF, Teixeira LA, Jesus PA, de Queiroz DC, Pereira DF, Pinto E, Leite JP, Lopes AA, Oliveira-Filho J.

Cerebrovasc Dis. 2009;27(2):119-22. doi: 10.1159/000177918. Epub 2008 Nov 28.

PMID:
19039215

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