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Items: 1 to 50 of 57

1.

Pathological image compression for big data image analysis: Application to hotspot detection in breast cancer.

Niazi MKK, Lin Y, Liu F, Ashok A, Marcellin MW, Tozbikian G, Gurcan MN, Bilgin A.

Artif Intell Med. 2019 Apr;95:82-87. doi: 10.1016/j.artmed.2018.09.002. Epub 2018 Sep 25.

PMID:
30266546
2.

Mosaic-Based Color-Transform Optimization for Lossy and Lossy-to-Lossless Compression of Pathology Whole-Slide Images.

Hernandez-Cabronero M, Sanchez V, Blanes I, Auli-Llinas F, Marcellin MW, Serra-Sagrista J.

IEEE Trans Med Imaging. 2019 Jan;38(1):21-32. doi: 10.1109/TMI.2018.2852685. Epub 2018 Jul 3.

PMID:
29994394
3.

Functional Proteomic Profiling of Secreted Serine Proteases in Health and Inflammatory Bowel Disease.

Denadai-Souza A, Bonnart C, Tapias NS, Marcellin M, Gilmore B, Alric L, Bonnet D, Burlet-Schiltz O, Hollenberg MD, Vergnolle N, Deraison C.

Sci Rep. 2018 May 18;8(1):7834. doi: 10.1038/s41598-018-26282-y.

4.

Visually Lossless JPEG 2000 for Remote Image Browsing.

Oh H, Bilgin A, Marcellin M.

Information (Basel). 2016 Sep;7(3). pii: 45. doi: 10.3390/info7030045. Epub 2016 Jul 15.

5.

Proteomic Analysis of Regulatory T Cells Reveals the Importance of Themis1 in the Control of Their Suppressive Function.

Duguet F, Locard-Paulet M, Marcellin M, Chaoui K, Bernard I, Andreoletti O, Lesourne R, Burlet-Schiltz O, Gonzalez de Peredo A, Saoudi A.

Mol Cell Proteomics. 2017 Aug;16(8):1416-1432. doi: 10.1074/mcp.M116.062745. Epub 2017 Apr 3.

6.

Themis2 lowers the threshold for B cell activation during positive selection.

Cheng D, Deobagkar-Lele M, Zvezdova E, Choi S, Uehara S, Baup D, Bennett SC, Bull KR, Crockford TL, Ferry H, Warzecha C, Marcellin M, de Peredo AG, Lesourne R, Anzilotti C, Love PE, Cornall RJ.

Nat Immunol. 2017 Feb;18(2):205-213. doi: 10.1038/ni.3642. Epub 2016 Dec 19.

PMID:
27992403
7.

Looking for Missing Proteins in the Proteome of Human Spermatozoa: An Update.

Vandenbrouck Y, Lane L, Carapito C, Duek P, Rondel K, Bruley C, Macron C, Gonzalez de Peredo A, Couté Y, Chaoui K, Com E, Gateau A, Hesse AM, Marcellin M, Méar L, Mouton-Barbosa E, Robin T, Burlet-Schiltz O, Cianferani S, Ferro M, Fréour T, Lindskog C, Garin J, Pineau C.

J Proteome Res. 2016 Nov 4;15(11):3998-4019. Epub 2016 Aug 23.

PMID:
27444420
8.

Determination of differentially regulated proteins upon proteasome inhibition in AML cell lines by the combination of large-scale and targeted quantitative proteomics.

Matondo M, Marcellin M, Chaoui K, Bousquet-Dubouch MP, Gonzalez-de-Peredo A, Monsarrat B, Burlet-Schiltz O.

Proteomics. 2017 Apr;17(7). doi: 10.1002/pmic.201600089. Epub 2016 Dec 21.

9.

Themis1 enhances T cell receptor signaling during thymocyte development by promoting Vav1 activity and Grb2 stability.

Zvezdova E, Mikolajczak J, Garreau A, Marcellin M, Rigal L, Lee J, Choi S, Blaize G, Argenty J, Familiades J, Li L, Gonzalez de Peredo A, Burlet-Schiltz O, Love PE, Lesourne R.

Sci Signal. 2016 May 17;9(428):ra51. doi: 10.1126/scisignal.aad1576.

PMID:
27188442
10.

Spiked proteomic standard dataset for testing label-free quantitative software and statistical methods.

Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssié D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianférani S, Ferro M, Dorssaeler AV, Burlet-Schiltz O, Schaeffer C, Couté Y, Gonzalez de Peredo A.

Data Brief. 2015 Dec 17;6:286-94. doi: 10.1016/j.dib.2015.11.063. eCollection 2016 Mar.

11.

Benchmarking quantitative label-free LC-MS data processing workflows using a complex spiked proteomic standard dataset.

Ramus C, Hovasse A, Marcellin M, Hesse AM, Mouton-Barbosa E, Bouyssié D, Vaca S, Carapito C, Chaoui K, Bruley C, Garin J, Cianférani S, Ferro M, Van Dorssaeler A, Burlet-Schiltz O, Schaeffer C, Couté Y, Gonzalez de Peredo A.

J Proteomics. 2016 Jan 30;132:51-62. doi: 10.1016/j.jprot.2015.11.011. Epub 2015 Nov 14.

PMID:
26585461
12.

Analysis-Driven Lossy Compression of DNA Microarray Images.

Hernández-Cabronero M, Blanes I, Pinho AJ, Marcellin MW, Serra-Sagristà J.

IEEE Trans Med Imaging. 2016 Feb;35(2):654-64. doi: 10.1109/TMI.2015.2489262. Epub 2015 Oct 9.

PMID:
26462084
13.

TOM1 is a PI5P effector involved in the regulation of endosomal maturation.

Boal F, Mansour R, Gayral M, Saland E, Chicanne G, Xuereb JM, Marcellin M, Burlet-Schiltz O, Sansonetti PJ, Payrastre B, Tronchère H.

J Cell Sci. 2015 Feb 15;128(4):815-27. doi: 10.1242/jcs.166314. Epub 2015 Jan 14.

14.

A methodology for visually lossless JPEG2000 compression of monochrome stereo images.

Feng HC, Marcellin MW, Bilgin A.

IEEE Trans Image Process. 2015 Feb;24(2):560-72. doi: 10.1109/TIP.2014.2384273. Epub 2014 Dec 18.

PMID:
25532207
15.

Correlation modeling for compression of computed tomography images.

Munoz-Gomez J, Bartrina-Rapesta J, Marcellin MW, Serra-Sagristà J.

IEEE J Biomed Health Inform. 2013 Sep;17(5):928-35. doi: 10.1109/JBHI.2013.2264595.

PMID:
25055372
16.

First structural insights into α-L-arabinofuranosidases from the two GH62 glycoside hydrolase subfamilies.

Siguier B, Haon M, Nahoum V, Marcellin M, Burlet-Schiltz O, Coutinho PM, Henrissat B, Mourey L, O'Donohue MJ, Berrin JG, Tranier S, Dumon C.

J Biol Chem. 2014 Feb 21;289(8):5261-73. doi: 10.1074/jbc.M113.528133. Epub 2014 Jan 6.

17.

Heart structure-specific transcriptomic atlas reveals conserved microRNA-mRNA interactions.

Vacchi-Suzzi C, Hahne F, Scheubel P, Marcellin M, Dubost V, Westphal M, Boeglen C, Büchmann-Møller S, Cheung MS, Cordier A, De Benedetto C, Deurinck M, Frei M, Moulin P, Oakeley E, Grenet O, Grevot A, Stull R, Theil D, Moggs JG, Marrer E, Couttet P.

PLoS One. 2013;8(1):e52442. doi: 10.1371/journal.pone.0052442. Epub 2013 Jan 2.

18.

Identification of Dlk1-Dio3 imprinted gene cluster noncoding RNAs as novel candidate biomarkers for liver tumor promotion.

Lempiäinen H, Couttet P, Bolognani F, Müller A, Dubost V, Luisier R, Del Rio Espinola A, Vitry V, Unterberger EB, Thomson JP, Treindl F, Metzger U, Wrzodek C, Hahne F, Zollinger T, Brasa S, Kalteis M, Marcellin M, Giudicelli F, Braeuning A, Morawiec L, Zamurovic N, Längle U, Scheer N, Schübeler D, Goodman J, Chibout SD, Marlowe J, Theil D, Heard DJ, Grenet O, Zell A, Templin MF, Meehan RR, Wolf RC, Elcombe CR, Schwarz M, Moulin P, Terranova R, Moggs JG.

Toxicol Sci. 2013 Feb;131(2):375-86. doi: 10.1093/toxsci/kfs303. Epub 2012 Oct 22.

PMID:
23091169
19.

Visually lossless encoding for JPEG2000.

Oh H, Bilgin A, Marcellin MW.

IEEE Trans Image Process. 2013 Jan;22(1):189-201. doi: 10.1109/TIP.2012.2215616. Epub 2012 Aug 27.

PMID:
22949058
20.

Chronic estradiol treatment reduces platelet responses and protects mice from thromboembolism through the hematopoietic estrogen receptor α.

Valéra MC, Gratacap MP, Gourdy P, Lenfant F, Cabou C, Toutain CE, Marcellin M, Saint Laurent N, Sié P, Sixou M, Arnal JF, Payrastre B.

Blood. 2012 Aug 23;120(8):1703-12. doi: 10.1182/blood-2012-01-405498. Epub 2012 Jul 9.

PMID:
22776819
21.

Tyrosine-dependent capture of CAP-Gly domain-containing proteins in complex mixture by EB1 C-terminal peptidic probes.

Calligaris D, Manatschal C, Marcellin M, Villard C, Monsarrat B, Burlet-Schiltz O, Steinmetz MO, Braguer D, Lafitte D, Verdier-Pinard P.

J Proteomics. 2012 Jun 27;75(12):3605-16. doi: 10.1016/j.jprot.2012.04.006. Epub 2012 Apr 21.

PMID:
22543185
22.

Scanning order strategies for bitplane image coding.

Aulí-Llinàs F, Marcellin MW.

IEEE Trans Image Process. 2012 Apr;21(4):1920-33. doi: 10.1109/TIP.2011.2176953. Epub 2011 Nov 22.

PMID:
22128007
23.

The nucleolar protein Nop19p interacts preferentially with Utp25p and Dhr2p and is essential for the production of the 40S ribosomal subunit in Saccharomyces cerevisiae.

Choque E, Marcellin M, Burlet-Schiltz O, Gadal O, Dez C.

RNA Biol. 2011 Nov-Dec;8(6):1158-72. doi: 10.4161/rna.8.6.17699. Epub 2011 Nov 1.

24.

Affinity chromatography: a valuable strategy to isolate substrates of methionine sulfoxide reductases?

Tarrago L, Kieffer-Jaquinod S, Lamant T, Marcellin MN, Garin JR, Rouhier N, Rey P.

Antioxid Redox Signal. 2012 Jan 1;16(1):79-84. doi: 10.1089/ars.2011.4153. Epub 2011 Sep 1.

PMID:
21882992
25.

A screen for deubiquitinating enzymes involved in the G₂/M checkpoint identifies USP50 as a regulator of HSP90-dependent Wee1 stability.

Aressy B, Jullien D, Cazales M, Marcellin M, Bugler B, Burlet-Schiltz O, Ducommun B.

Cell Cycle. 2010 Sep 15;9(18):3815-22. doi: 10.4161/cc.9.18.13133. Epub 2010 Sep 25.

PMID:
20930503
26.

FAST rate allocation through steepest descent for JPEG2000 video transmission.

Aulí-Llinàs F, Bilgin A, Marcellin MW.

IEEE Trans Image Process. 2011 Apr;20(4):1166-73. doi: 10.1109/TIP.2010.2077304. Epub 2010 Sep 23.

PMID:
20875972
27.

View compensated compression of volume rendered images for remote visualization.

Lalgudi HG, Marcellin MW, Bilgin A, Oh H, Nadar MS.

IEEE Trans Image Process. 2009 Jul;18(7):1501-11. doi: 10.1109/TIP.2009.2017151. Epub 2009 May 12.

PMID:
19447720
28.

Distortion estimators for bitplane image coding.

Aulí-Llinàs F, Marcellin MW.

IEEE Trans Image Process. 2009 Aug;18(8):1772-81. doi: 10.1109/TIP.2009.2022209. Epub 2009 May 5.

PMID:
19423442
29.

Peptide storage: are you getting the best return on your investment? Defining optimal storage conditions for proteomics samples.

Kraut A, Marcellin M, Adrait A, Kuhn L, Louwagie M, Kieffer-Jaquinod S, Lebert D, Masselon CD, Dupuis A, Bruley C, Jaquinod M, Garin J, Gallagher-Gambarelli M.

J Proteome Res. 2009 Jul;8(7):3778-85. doi: 10.1021/pr900095u.

PMID:
19397304
30.

Improved resolution scalability for bilevel image data in JPEG2000.

Raguram R, Marcellin MW, Bilgin A.

IEEE Trans Image Process. 2009 Apr;18(4):774-82. doi: 10.1109/TIP.2008.2011455. Epub 2009 Feb 18.

PMID:
19228557
31.

Three-dimensional image compression with integer wavelet transforms.

Bilgin A, Zweig G, Marcellin MW.

Appl Opt. 2000 Apr 10;39(11):1799-814.

PMID:
18345077
32.

Communication theoretic image restoration for binary-valued imagery.

Neifeld MA, Xuan R, Marcellin MW.

Appl Opt. 2000 Jan 10;39(2):269-76.

PMID:
18337894
33.

Universal trellis coded quantization.

Kasner JH, Marcellin MW, Hunt BR.

IEEE Trans Image Process. 1999;8(12):1677-87. doi: 10.1109/83.806615.

PMID:
18267446
34.

Progressive image coding using trellis coded quantization.

Bilgin A, Sementilli PJ, Marcellin MW.

IEEE Trans Image Process. 1999;8(11):1638-43. doi: 10.1109/83.799891.

PMID:
18267438
35.

Rate allocation for spotlight SAR phase history data compression.

Owens JW, Marcellin MW.

IEEE Trans Image Process. 1999;8(11):1527-33. doi: 10.1109/83.799881.

PMID:
18267428
36.

Near-lossless image compression: minimum-entropy, constrained-error DPCM.

Ke L, Marcellin MW.

IEEE Trans Image Process. 1998;7(2):225-8. doi: 10.1109/83.660999.

PMID:
18267396
37.

A vector quantizer for image restoration.

Sheppard DG, Bilgin A, Nadar MS, Hunt BR, Marcellin MW.

IEEE Trans Image Process. 1998;7(1):119-24. doi: 10.1109/83.650857.

PMID:
18267386
38.

Scalable image coding using reversible integer wavelet transforms.

Bilgin A, Sementilli J, Sheng F, Marcellin MW.

IEEE Trans Image Process. 2000;9(11):1972-7. doi: 10.1109/83.877218.

PMID:
18262932
39.

Lapped nonlinear interpolative vector quantization and image super-resolution.

Sheppard DG, Panchapakesan K, Bilgin A, Hunt BR, Marcellin MW.

IEEE Trans Image Process. 2000;9(2):295-8. doi: 10.1109/83.821746.

PMID:
18255400
40.

Blur identification from vector quantizer encoder distortion.

Panchapakesan K, Sheppard DG, Marcellin MW, Hunt BR.

IEEE Trans Image Process. 2001;10(3):465-70. doi: 10.1109/83.908524.

PMID:
18249635
41.

Resource-constrained rate control for Motion JPEG2000.

Dagher JC, Bilgin A, Marcellin MW.

IEEE Trans Image Process. 2003;12(12):1522-9. doi: 10.1109/TIP.2003.819228.

PMID:
18244707
42.

Isotope-labeled protein standards: toward absolute quantitative proteomics.

Brun V, Dupuis A, Adrait A, Marcellin M, Thomas D, Court M, Vandenesch F, Garin J.

Mol Cell Proteomics. 2007 Dec;6(12):2139-49. Epub 2007 Sep 11.

43.

Joint source-channel rate allocation in parallel channels.

Pu L, Marcellin MW, Djordjevic I, Vasic B, Bilgin A.

IEEE Trans Image Process. 2007 Aug;16(8):2016-22.

PMID:
17688206
44.

LDPC-based iterative joint source-channel decoding for JPEG2000.

Pu L, Wu Z, Bilgin A, Marcellin MW, Vasic B.

IEEE Trans Image Process. 2007 Feb;16(2):577-81.

PMID:
17269650
45.

Collaborative multihop transmission of distributed sensor imagery.

Dagher JC, Marcellin MW, Neifeld MA.

Appl Opt. 2006 Oct 1;45(28):7353-64.

PMID:
16983425
46.

Efficient transmission of compressed data for remote volume visualization.

Krishnan K, Marcellin MW, Bilgin A, Nadar MS.

IEEE Trans Med Imaging. 2006 Sep;25(9):1189-99.

PMID:
16967804
47.

A method for coordinating the distributed transmission of imagery.

Dagher JC, Marcellin MW, Neifeld MA.

IEEE Trans Image Process. 2006 Jul;15(7):1705-17.

PMID:
16830895
48.

Joint source/channel coding for image transmission with JPEG2000 over memoryless channels.

Wu Z, Bilgin A, Marcellin MW.

IEEE Trans Image Process. 2005 Aug;14(8):1020-32.

PMID:
16121451
49.

Efficient storage and transmission of ladar imagery.

Dagher JC, Marcellin MW, Neifeld MA.

Appl Opt. 2003 Dec 10;42(35):7023-35.

PMID:
14674647
50.

Adaptive reconstruction of phased array MR imagery.

Walsh DO, Gmitro AF, Marcellin MW.

Magn Reson Med. 2000 May;43(5):682-90.

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