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Items: 43

1.

Quantitative analysis of tetrahydrofolate metabolites from clostridium autoethanogenum.

de Souza Pinto Lemgruber R, Valgepea K, Hodson MP, Tappel R, Simpson SD, Köpke M, Nielsen LK, Marcellin E.

Metabolomics. 2018 Feb 16;14(3):35. doi: 10.1007/s11306-018-1331-2.

PMID:
30830344
2.

Systems-level engineering and characterisation of Clostridium autoethanogenum through heterologous production of poly-3-hydroxybutyrate (PHB).

de Souza Pinto Lemgruber R, Valgepea K, Tappel R, Behrendorff JB, Palfreyman RW, Plan M, Hodson MP, Simpson SD, Nielsen LK, Köpke M, Marcellin E.

Metab Eng. 2019 May;53:14-23. doi: 10.1016/j.ymben.2019.01.003. Epub 2019 Jan 11.

PMID:
30641139
3.

Talaropeptides A-D: Structure and Biosynthesis of Extensively N-methylated Linear Peptides From an Australian Marine Tunicate-Derived Talaromyces sp.

Dewapriya P, Khalil ZG, Prasad P, Salim AA, Cruz-Morales P, Marcellin E, Capon RJ.

Front Chem. 2018 Sep 4;6:394. doi: 10.3389/fchem.2018.00394. eCollection 2018.

4.

Linking genotype and phenotype in an economically viable propionic acid biosynthesis process.

Luna-Flores CH, Stowers CC, Cox BM, Nielsen LK, Marcellin E.

Biotechnol Biofuels. 2018 Aug 13;11:224. doi: 10.1186/s13068-018-1222-9. eCollection 2018.

5.

Inter-Kingdom beach warfare: Microbial chemical communication activates natural chemical defences.

Khalil ZG, Cruz-Morales P, Licona-Cassani C, Marcellin E, Capon RJ.

ISME J. 2019 Jan;13(1):147-158. doi: 10.1038/s41396-018-0265-z. Epub 2018 Aug 16.

PMID:
30116041
6.

Synthetic microbe communities provide internal reference standards for metagenome sequencing and analysis.

Hardwick SA, Chen WY, Wong T, Kanakamedala BS, Deveson IW, Ongley SE, Santini NS, Marcellin E, Smith MA, Nielsen LK, Lovelock CE, Neilan BA, Mercer TR.

Nat Commun. 2018 Aug 6;9(1):3096. doi: 10.1038/s41467-018-05555-0.

7.

Enhanced uptake of potassium or glycine betaine or export of cyclic-di-AMP restores osmoresistance in a high cyclic-di-AMP Lactococcus lactis mutant.

Pham HT, Nhiep NTH, Vu TNM, Huynh TN, Zhu Y, Huynh ALD, Chakrabortti A, Marcellin E, Lo R, Howard CB, Bansal N, Woodward JJ, Liang ZX, Turner MS.

PLoS Genet. 2018 Aug 3;14(8):e1007574. doi: 10.1371/journal.pgen.1007574. eCollection 2018 Aug.

8.

H2 drives metabolic rearrangements in gas-fermenting Clostridium autoethanogenum.

Valgepea K, de Souza Pinto Lemgruber R, Abdalla T, Binos S, Takemori N, Takemori A, Tanaka Y, Tappel R, Köpke M, Simpson SD, Nielsen LK, Marcellin E.

Biotechnol Biofuels. 2018 Mar 1;11:55. doi: 10.1186/s13068-018-1052-9. eCollection 2018.

9.

Advances in analytical tools for high throughput strain engineering.

Marcellin E, Nielsen LK.

Curr Opin Biotechnol. 2018 Dec;54:33-40. doi: 10.1016/j.copbio.2018.01.027. Epub 2018 Feb 12. Review.

PMID:
29448095
10.

RNA-Seq Highlights High Clonal Variation in Monoclonal Antibody Producing CHO Cells.

Orellana CA, Marcellin E, Palfreyman RW, Munro TP, Gray PP, Nielsen LK.

Biotechnol J. 2018 Mar;13(3):e1700231. doi: 10.1002/biot.201700231. Epub 2018 Feb 1.

PMID:
29316330
11.

Genome-scale model guided design of Propionibacterium for enhanced propionic acid production.

Navone L, McCubbin T, Gonzalez-Garcia RA, Nielsen LK, Marcellin E.

Metab Eng Commun. 2017 Nov 24;6:1-12. doi: 10.1016/j.meteno.2017.11.001. eCollection 2018 Jun.

12.

Diverse Cone-Snail Species Harbor Closely Related Streptomyces Species with Conserved Chemical and Genetic Profiles, Including Polycyclic Tetramic Acid Macrolactams.

Quezada M, Licona-Cassani C, Cruz-Morales P, Salim AA, Marcellin E, Capon RJ, Barona-Gómez F.

Front Microbiol. 2017 Nov 24;8:2305. doi: 10.3389/fmicb.2017.02305. eCollection 2017.

13.

Overcoming the energetic limitations of syngas fermentation.

Molitor B, Marcellin E, Angenent LT.

Curr Opin Chem Biol. 2017 Dec;41:84-92. doi: 10.1016/j.cbpa.2017.10.003. Epub 2017 Nov 7. Review.

PMID:
29125940
14.

Awakening sleeping beauty: production of propionic acid in Escherichia coli through the sbm operon requires the activity of a methylmalonyl-CoA epimerase.

Gonzalez-Garcia RA, McCubbin T, Wille A, Plan M, Nielsen LK, Marcellin E.

Microb Cell Fact. 2017 Jul 17;16(1):121. doi: 10.1186/s12934-017-0735-4.

15.

Maintenance of ATP Homeostasis Triggers Metabolic Shifts in Gas-Fermenting Acetogens.

Valgepea K, de Souza Pinto Lemgruber R, Meaghan K, Palfreyman RW, Abdalla T, Heijstra BD, Behrendorff JB, Tappel R, Köpke M, Simpson SD, Nielsen LK, Marcellin E.

Cell Syst. 2017 May 24;4(5):505-515.e5. doi: 10.1016/j.cels.2017.04.008. Epub 2017 May 17.

16.

Arginine deiminase pathway provides ATP and boosts growth of the gas-fermenting acetogen Clostridium autoethanogenum.

Valgepea K, Loi KQ, Behrendorff JB, Lemgruber RSP, Plan M, Hodson MP, Köpke M, Nielsen LK, Marcellin E.

Metab Eng. 2017 May;41:202-211. doi: 10.1016/j.ymben.2017.04.007. Epub 2017 Apr 23.

PMID:
28442386
17.

Overexpression of the regulatory subunit of glutamate-cysteine ligase enhances monoclonal antibody production in CHO cells.

Orellana CA, Marcellin E, Gray PP, Nielsen LK.

Biotechnol Bioeng. 2017 Aug;114(8):1825-1836. doi: 10.1002/bit.26316. Epub 2017 May 8.

PMID:
28436007
18.

Improved production of propionic acid using genome shuffling.

Luna-Flores CH, Palfreyman RW, Krömer JO, Nielsen LK, Marcellin E.

Biotechnol J. 2017 Feb;12(2). doi: 10.1002/biot.201600120. Epub 2016 Oct 20.

PMID:
27676587
19.

Addressing ethical challenges in the Genetics Substudy of the National Eye Survey of Trinidad and Tobago (GSNESTT).

Roach AN, Braithwaite T, Carrington C, Marcellin E, Sharma S, Hingorani A, Casas JP, Hauser MA, Allingham RR, Ramsewak SS, Bourne R.

Appl Transl Genom. 2016 May 12;9:6-14. doi: 10.1016/j.atg.2016.05.001. eCollection 2016 Jun.

20.

Tetanus toxin production is triggered by the transition from amino acid consumption to peptides.

Licona-Cassani C, Steen JA, Zaragoza NE, Moonen G, Moutafis G, Hodson MP, Power J, Nielsen LK, Marcellin E.

Anaerobe. 2016 Oct;41:113-124. doi: 10.1016/j.anaerobe.2016.07.006. Epub 2016 Aug 1.

21.

High-performance targeted mass spectrometry with precision data-independent acquisition reveals site-specific glycosylation macroheterogeneity.

Yeo KYB, Chrysanthopoulos PK, Nouwens AS, Marcellin E, Schulz BL.

Anal Biochem. 2016 Oct 1;510:106-113. doi: 10.1016/j.ab.2016.06.009. Epub 2016 Jun 16.

PMID:
27318240
22.

Genome Sequence of Propionibacterium acidipropionici ATCC 55737.

Luna-Flores CH, Nielsen LK, Marcellin E.

Genome Announc. 2016 May 19;4(3). pii: e00248-16. doi: 10.1128/genomeA.00248-16.

23.

Replenishing the cyclic-di-AMP pool: regulation of diadenylate cyclase activity in bacteria.

Pham TH, Liang ZX, Marcellin E, Turner MS.

Curr Genet. 2016 Nov;62(4):731-738. Epub 2016 Apr 13. Review.

PMID:
27074767
24.

Systems Biology Approaches to Understand Natural Products Biosynthesis.

Licona-Cassani C, Cruz-Morales P, Manteca A, Barona-Gomez F, Nielsen LK, Marcellin E.

Front Bioeng Biotechnol. 2015 Dec 9;3:199. doi: 10.3389/fbioe.2015.00199. eCollection 2015. Review.

25.

Cyclic-di-AMP synthesis by the diadenylate cyclase CdaA is modulated by the peptidoglycan biosynthesis enzyme GlmM in Lactococcus lactis.

Zhu Y, Pham TH, Nhiep TH, Vu NM, Marcellin E, Chakrabortti A, Wang Y, Waanders J, Lo R, Huston WM, Bansal N, Nielsen LK, Liang ZX, Turner MS.

Mol Microbiol. 2016 Mar;99(6):1015-27. doi: 10.1111/mmi.13281. Epub 2015 Dec 15.

26.

AllR Controls the Expression of Streptomyces coelicolor Allantoin Pathway Genes.

Navone L, Macagno JP, Licona-Cassani C, Marcellin E, Nielsen LK, Gramajo H, Rodriguez E.

Appl Environ Microbiol. 2015 Oct;81(19):6649-59. doi: 10.1128/AEM.02098-15. Epub 2015 Jul 17.

27.

Global dynamics of Escherichia coli phosphoproteome in central carbon metabolism under changing culture conditions.

Lim S, Marcellin E, Jacob S, Nielsen LK.

J Proteomics. 2015 Aug 3;126:24-33. doi: 10.1016/j.jprot.2015.05.021. Epub 2015 May 23.

PMID:
26013414
28.

High-antibody-producing Chinese hamster ovary cells up-regulate intracellular protein transport and glutathione synthesis.

Orellana CA, Marcellin E, Schulz BL, Nouwens AS, Gray PP, Nielsen LK.

J Proteome Res. 2015 Feb 6;14(2):609-18. doi: 10.1021/pr501027c. Epub 2015 Jan 14.

PMID:
25495469
29.

Escherichia coli W shows fast, highly oxidative sucrose metabolism and low acetate formation.

Arifin Y, Archer C, Lim S, Quek LE, Sugiarto H, Marcellin E, Vickers CE, Krömer JO, Nielsen LK.

Appl Microbiol Biotechnol. 2014 Nov;98(21):9033-44. doi: 10.1007/s00253-014-5956-4. Epub 2014 Aug 16.

PMID:
25125039
30.

Control of chitin and N-acetylglucosamine utilization in Saccharopolyspora erythraea.

Liao C, Rigali S, Cassani CL, Marcellin E, Nielsen LK, Ye BC.

Microbiology. 2014 Sep;160(Pt 9):1914-28. doi: 10.1099/mic.0.078261-0. Epub 2014 Jul 9.

31.

Insight into hyaluronic acid molecular weight control.

Marcellin E, Steen JA, Nielsen LK.

Appl Microbiol Biotechnol. 2014 Aug;98(16):6947-56. doi: 10.1007/s00253-014-5853-x. Epub 2014 Jun 24. Review.

PMID:
24957250
32.

Temporal dynamics of the Saccharopolyspora erythraea phosphoproteome.

Licona-Cassani C, Lim S, Marcellin E, Nielsen LK.

Mol Cell Proteomics. 2014 May;13(5):1219-30. doi: 10.1074/mcp.M113.033951. Epub 2014 Mar 10.

33.

Allantoin catabolism influences the production of antibiotics in Streptomyces coelicolor.

Navone L, Casati P, Licona-Cassani C, Marcellin E, Nielsen LK, Rodriguez E, Gramajo H.

Appl Microbiol Biotechnol. 2014 Jan;98(1):351-60. doi: 10.1007/s00253-013-5372-1. Epub 2013 Nov 29.

PMID:
24292080
34.

Re-annotation of the Saccharopolyspora erythraea genome using a systems biology approach.

Marcellin E, Licona-Cassani C, Mercer TR, Palfreyman RW, Nielsen LK.

BMC Genomics. 2013 Oct 11;14:699. doi: 10.1186/1471-2164-14-699.

35.

The role of hyaluronic acid precursor concentrations in molecular weight control in Streptococcus zooepidemicus.

Chen WY, Marcellin E, Steen JA, Nielsen LK.

Mol Biotechnol. 2014 Feb;56(2):147-56. doi: 10.1007/s12033-013-9690-4.

PMID:
23903961
36.

Saccharopolyspora erythraea's genome is organised in high-order transcriptional regions mediated by targeted degradation at the metabolic switch.

Marcellin E, Mercer TR, Licona-Cassani C, Palfreyman RW, Dinger ME, Steen JA, Mattick JS, Nielsen LK.

BMC Genomics. 2013 Jan 16;14:15. doi: 10.1186/1471-2164-14-15.

37.

Engineering and adaptive evolution of Escherichia coli for D-lactate fermentation reveals GatC as a xylose transporter.

Utrilla J, Licona-Cassani C, Marcellin E, Gosset G, Nielsen LK, Martinez A.

Metab Eng. 2012 Sep;14(5):469-76. doi: 10.1016/j.ymben.2012.07.007. Epub 2012 Aug 4.

PMID:
22885034
38.

Reconstruction of the Saccharopolyspora erythraea genome-scale model and its use for enhancing erythromycin production.

Licona-Cassani C, Marcellin E, Quek LE, Jacob S, Nielsen LK.

Antonie Van Leeuwenhoek. 2012 Oct;102(3):493-502. Epub 2012 Jul 31.

PMID:
22847261
39.

Understanding plasmid effect on hyaluronic acid molecular weight produced by Streptococcus equi subsp. zooepidemicus.

Marcellin E, Chen WY, Nielsen LK.

Metab Eng. 2010 Jan;12(1):62-9. doi: 10.1016/j.ymben.2009.09.001. Epub 2009 Sep 23.

PMID:
19782148
40.

Hyaluronan molecular weight is controlled by UDP-N-acetylglucosamine concentration in Streptococcus zooepidemicus.

Chen WY, Marcellin E, Hung J, Nielsen LK.

J Biol Chem. 2009 Jul 3;284(27):18007-14. doi: 10.1074/jbc.M109.011999. Epub 2009 May 18.

41.

Proteome analysis of the hyaluronic acid-producing bacterium, Streptococcus zooepidemicus.

Marcellin E, Gruber CW, Archer C, Craik DJ, Nielsen LK.

Proteome Sci. 2009 Mar 28;7:13. doi: 10.1186/1477-5956-7-13.

42.

Quantitative analysis of intracellular sugar phosphates and sugar nucleotides in encapsulated streptococci using HPAEC-PAD.

Marcellin E, Nielsen LK, Abeydeera P, Krömer JO.

Biotechnol J. 2009 Jan;4(1):58-63. doi: 10.1002/biot.200800197.

PMID:
19156726
43.

Microbiological evaluation of infected wounds of the extremities in 214 adults.

Holzapfel L, Jacquet-Francillon T, Rahmani J, Achard P, Marcellin E, Joffre T, Lallement PY, Bousquet A, Devaux S, Coupry A.

J Accid Emerg Med. 1999 Jan;16(1):32-4.

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