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Items: 7

1.

Dynamics of promoter bivalency and RNAP II pausing in mouse stem and differentiated cells.

Mantsoki A, Devailly G, Joshi A.

BMC Dev Biol. 2018 Feb 20;18(1):2. doi: 10.1186/s12861-018-0163-7.

2.

Delineating biological and technical variance in single cell expression data.

Arzalluz-Luque Á, Devailly G, Mantsoki A, Joshi A.

Int J Biochem Cell Biol. 2017 Sep;90:161-166. doi: 10.1016/j.biocel.2017.07.006. Epub 2017 Jul 15. Review.

3.

Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data.

Devailly G, Mantsoki A, Joshi A.

Bioinformatics. 2016 Nov 1;32(21):3354-3356. Epub 2016 Jul 4.

4.

Corrigendum: CpG island erosion, polycomb occupancy and sequence motif enrichment at bivalent promoters in mammalian embryonic stem cells.

Mantsoki A, Devailly G, Joshi A.

Sci Rep. 2016 May 23;6:25682. doi: 10.1038/srep25682. No abstract available.

5.

Gene expression variability in mammalian embryonic stem cells using single cell RNA-seq data.

Mantsoki A, Devailly G, Joshi A.

Comput Biol Chem. 2016 Aug;63:52-61. doi: 10.1016/j.compbiolchem.2016.02.004. Epub 2016 Feb 18.

6.

Variable reproducibility in genome-scale public data: A case study using ENCODE ChIP sequencing resource.

Devailly G, Mantsoki A, Michoel T, Joshi A.

FEBS Lett. 2015 Dec 21;589(24 Pt B):3866-70. doi: 10.1016/j.febslet.2015.11.027. Epub 2015 Nov 24.

7.

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