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Items: 49

1.

The Finnish New Variant of Chlamydia trachomatis with a Single Nucleotide Polymorphism in the 23S rRNA Target Escapes Detection by the Aptima Combo 2 Test.

Hokynar K, Rantakokko-Jalava K, Hakanen A, Havana M, Mannonen L, Jokela P, Kurkela S, Lappalainen M, Unemo M, Puolakkainen M.

Microorganisms. 2019 Jul 31;7(8). pii: E227. doi: 10.3390/microorganisms7080227.

2.

Mycoplasma pneumoniae outbreak, Southeastern Finland, 2017-2018: molecular epidemiology and laboratory diagnostic lessons.

Kurkela S, Puolakkainen M, Hokynar K, Nieminen T, Saxen H, Mannonen L, Pietikäinen R.

Eur J Clin Microbiol Infect Dis. 2019 Oct;38(10):1867-1871. doi: 10.1007/s10096-019-03619-7. Epub 2019 Jul 1.

3.

Transcriptional Expression of the ompA, cpaf, tarp, and tox Genes of Chlamydia trachomatis Clinical Isolates at Different Stages of the Developmental Cycle.

Korhonen S, Hokynar K, Mannonen L, Paavonen J, Hiltunen-Back E, Puolakkainen M.

Microorganisms. 2019 May 28;7(6). pii: E153. doi: 10.3390/microorganisms7060153.

4.

Parachlamydia acanthamoebae Detected during a Pneumonia Outbreak in Southeastern Finland, in 2017⁻2018.

Hokynar K, Kurkela S, Nieminen T, Saxen H, Vesterinen EJ, Mannonen L, Pietikäinen R, Puolakkainen M.

Microorganisms. 2019 May 17;7(5). pii: E141. doi: 10.3390/microorganisms7050141.

5.

BK polyomavirus viremia and antibody responses of pediatric kidney transplant recipients in Finland.

Miettinen J, Lautenschlager I, Weissbach F, Wernli M, Auvinen E, Mannonen L, Lauronen J, Hirsch HH, Jalanko H.

Pediatr Transplant. 2019 Feb;23(1):e13324. doi: 10.1111/petr.13324. Epub 2018 Nov 16.

PMID:
30447046
6.

Genotyping of hepatitis C virus by nucleotide sequencing: A robust method for a diagnostic laboratory.

Virtanen E, Mannonen L, Lappalainen M, Auvinen E.

MethodsX. 2018 Apr 16;5:414-418. doi: 10.1016/j.mex.2018.04.005. eCollection 2018.

7.

Prevalence of Mycoplasma genitalium and mutations associated with macrolide and fluoroquinolone resistance in Finland.

Hokynar K, Hiltunen-Back E, Mannonen L, Puolakkainen M.

Int J STD AIDS. 2018 Aug;29(9):904-907. doi: 10.1177/0956462418764482. Epub 2018 Apr 9.

PMID:
29631509
8.

BK polyomavirus microRNA expression and sequence variation in polyomavirus-associated nephropathy.

Virtanen E, Seppälä H, Helanterä I, Laine P, Lautenschlager I, Paulin L, Mannonen L, Auvinen P, Auvinen E.

J Clin Virol. 2018 May;102:70-76. doi: 10.1016/j.jcv.2018.02.007. Epub 2018 Feb 12.

9.

Single-Molecule Sequencing Revealing the Presence of Distinct JC Polyomavirus Populations in Patients With Progressive Multifocal Leukoencephalopathy.

Seppälä H, Virtanen E, Saarela M, Laine P, Paulín L, Mannonen L, Auvinen P, Auvinen E.

J Infect Dis. 2017 Mar 15;215(6):889-895. doi: 10.1093/infdis/jiw399.

PMID:
28453853
10.

Human herpes virus 6 infection in pediatric organ transplant patients.

Ylinen E, Lehtinen S, Jahnukainen T, Karlsson T, Loginov R, Mannonen L, Lautenschlager I, Jalanko H.

Pediatr Transplant. 2017 Jun;21(4). doi: 10.1111/petr.12905. Epub 2017 Feb 18.

PMID:
28213954
11.

High-level JCPyV viruria after kidney transplantation-Clinical and histopathological findings.

Helanterä I, Hirsch HH, Auvinen E, Mannonen L, Nummi M, Wernli M, Ortiz F, Räisänen-Sokolowski A, Lempinen M, Lautenschlager I.

J Clin Virol. 2016 Dec;85:75-79. doi: 10.1016/j.jcv.2016.10.018. Epub 2016 Nov 2.

PMID:
27842264
12.

[Rapid diagnosis of diarrhea viruses].

Loginov R, Mannonen L, Lappalainen M.

Duodecim. 2016;132(7):648-53. Review. Finnish.

PMID:
27188089
13.

Simultaneous BK Polyomavirus (BKPyV)-associated nephropathy and hemorrhagic cystitis after living donor kidney transplantation.

Helanterä I, Hirsch HH, Wernli M, Ortiz F, Lempinen M, Räisänen-Sokolowski A, Auvinen E, Mannonen L, Lautenschlager I.

J Clin Virol. 2016 Mar;76:4-7. doi: 10.1016/j.jcv.2015.12.008. Epub 2015 Dec 30.

PMID:
26771744
15.

Expression of BKV and JCV encoded microRNA in human cerebrospinal fluid, plasma and urine.

Pietilä T, Nummi M, Auvinen P, Mannonen L, Auvinen E.

J Clin Virol. 2015 Apr;65:1-5. doi: 10.1016/j.jcv.2015.01.019. Epub 2015 Jan 28.

PMID:
25766978
16.

Diffuse gastrointestinal bleeding and BK polyomavirus replication in a pediatric allogeneic haematopoietic stem cell transplant patient.

Koskenvuo M, Lautenschlager I, Kardas P, Auvinen E, Mannonen L, Huttunen P, Taskinen M, Vettenranta K, Hirsch HH.

J Clin Virol. 2015 Jan;62:72-4. doi: 10.1016/j.jcv.2014.11.016. Epub 2014 Nov 18. Review.

PMID:
25542476
17.

A case of primary JC polyomavirus infection-associated nephropathy.

Lautenschlager I, Jahnukainen T, Kardas P, Lohi J, Auvinen E, Mannonen L, Dumoulin A, Hirsch HH, Jalanko H.

Am J Transplant. 2014 Dec;14(12):2887-92. doi: 10.1111/ajt.12945. Epub 2014 Oct 30.

18.

Comparison of two quantitative real-time CMV-PCR tests calibrated against the 1st WHO international standard for viral load monitoring of renal transplant patients.

Mannonen L, Loginov R, Helanterä I, Dumoulin A, Vilchez RA, Cobb B, Hirsch HH, Lautenschlager I.

J Med Virol. 2014 Apr;86(4):576-84. doi: 10.1002/jmv.23733. Epub 2013 Sep 11.

PMID:
24026892
19.

BK virus viremia in a well-HLA-matched kidney transplant population mainly on low-dose cyclosporine-based immunosuppression.

Helanterä I, Salmela K, Kyllönen L, Räisänen-Sokolowski A, Auvinen E, Mannonen L, Koskinen P, Lautenschlager I.

Clin Transplant. 2012 Nov-Dec;26(6):E596-601. doi: 10.1111/ctr.12040. Epub 2012 Oct 22.

PMID:
23083418
20.

BK polyomavirus-associated hemorrhagic cystitis among pediatric allogeneic bone marrow transplant recipients: treatment response and evidence for nosocomial transmission.

Koskenvuo M, Dumoulin A, Lautenschlager I, Auvinen E, Mannonen L, Anttila VJ, Jahnukainen K, Saarinen-Pihkala UM, Hirsch HH.

J Clin Virol. 2013 Jan;56(1):77-81. doi: 10.1016/j.jcv.2012.09.003. Epub 2012 Sep 19.

PMID:
22999487
21.

Performance of the Luminex xTAG Respiratory Viral Panel Fast in a clinical laboratory setting.

Jokela P, Piiparinen H, Mannonen L, Auvinen E, Lappalainen M.

J Virol Methods. 2012 Jun;182(1-2):82-6. doi: 10.1016/j.jviromet.2012.03.015. Epub 2012 Mar 23.

PMID:
22465255
22.

Evaluation of multiplex polymerase chain reaction and microarray-based assay for rapid herpesvirus diagnostics.

Mannonen L, Vainionpää R, Kauppinen J, Lienhard R, Tritten ML, Cannon G, Hall WW, Moilanen K, Häkkinen M, Jääskeläinen AJ, Piiparinen H, Mäki M, Järvinen AK, Lappalainen M.

Diagn Microbiol Infect Dis. 2012 May;73(1):74-9. doi: 10.1016/j.diagmicrobio.2012.02.015. Epub 2012 Mar 27.

PMID:
22459558
23.

Development of a new quantitative real-time HHV-6-PCR and monitoring of HHV-6 DNAaemia after liver transplantation.

Karlsson T, Mannonen L, Loginov R, Lappalainen M, Höckerstedt K, Lautenschlager I.

J Virol Methods. 2012 Apr;181(1):25-36. doi: 10.1016/j.jviromet.2012.01.007. Epub 2012 Jan 24.

PMID:
22301197
24.

Validation and diagnostic application of NS and HA gene-specific real-time reverse transcription-PCR assays for detection of 2009 pandemic influenza A (H1N1) viruses in clinical specimens.

Rönkkö E, Ikonen N, Kontio M, Haanpää M, Kallio-Kokko H, Mannonen L, Lappalainen M, Julkunen I, Ziegler T.

J Clin Microbiol. 2011 May;49(5):2009-11. doi: 10.1128/JCM.00259-11. Epub 2011 Mar 2.

25.

Analysis of Chlamydia pneumoniae infection in mononuclear cells by reverse transcription-PCR targeted to chlamydial gene transcripts.

Mannonen L, Markkula E, Puolakkainen M.

Med Microbiol Immunol. 2011 Aug;200(3):143-54. doi: 10.1007/s00430-011-0184-3. Epub 2011 Jan 30.

PMID:
21279651
26.

Genetic diversity of the 2009 pandemic influenza A(H1N1) viruses in Finland.

Ikonen N, Haanpää M, Rönkkö E, Lyytikäinen O, Kuusi M, Ruutu P, Kallio-Kokko H, Mannonen L, Lappalainen M, Ziegler T, Julkunen I.

PLoS One. 2010 Oct 20;5(10):e13329. doi: 10.1371/journal.pone.0013329.

27.

Prolonged norovirus outbreak in a Finnish tertiary care hospital caused by GII.4-2006b subvariants.

Kanerva M, Maunula L, Lappalainen M, Mannonen L, von Bonsdorff CH, Anttila VJ.

J Hosp Infect. 2009 Mar;71(3):206-13. doi: 10.1016/j.jhin.2008.11.016. Epub 2009 Jan 20.

PMID:
19157648
28.

Primary human herpesvirus-6 infection in the central nervous system can cause severe disease.

Mannonen L, Herrgård E, Valmari P, Rautiainen P, Uotila K, Aine MR, Karttunen-Lewandowski P, Sankala J, Wallden T, Koskiniemi M.

Pediatr Neurol. 2007 Sep;37(3):186-91.

PMID:
17765806
29.

Search for Herpesviruses in cerebrospinal fluid of facial palsy patients by PCR.

Kanerva M, Mannonen L, Piiparinen H, Peltomaa M, Vaheri A, Pitkäranta A.

Acta Otolaryngol. 2007 Jul;127(7):775-9.

PMID:
17573575
30.

Up-regulation of host cell genes during interferon-gamma-induced persistent Chlamydia pneumoniae infection in HL cells.

Mannonen L, Nikula T, Haveri A, Reinikainen A, Vuola JM, Lahesmaa R, Puolakkainen M.

J Infect Dis. 2007 Jan 15;195(2):212-9. Epub 2006 Dec 13.

PMID:
17191166
31.
32.

[Genetically modified and other novel food products].

Mannonen L.

Duodecim. 2001;117(1):112-6. Review. Finnish. No abstract available.

PMID:
12092344
33.

[Gene amplification methods in viral diagnostics].

Lappalainen M, Söderlund M, Piiparinen H, Puolakkainen M, Mannonen L, Suni J, von Bonsdorff CH, Koskiniemi M, Hyypiä T, Vaheri A, Hedman K.

Duodecim. 1999;115(9):1031-6. Review. Finnish. No abstract available.

PMID:
11877817
34.

Infections of the central nervous system of suspected viral origin: a collaborative study from Finland.

Koskiniemi M, Rantalaiho T, Piiparinen H, von Bonsdorff CH, Färkkilä M, Järvinen A, Kinnunen E, Koskiniemi S, Mannonen L, Muttilainen M, Linnavuori K, Porras J, Puolakkainen M, Räihä K, Salonen EM, Ukkonen P, Vaheri A, Valtonen V; Study Group.

J Neurovirol. 2001 Oct;7(5):400-8.

PMID:
11582512
35.

Factors affecting the regeneration capacity of isolated barley microspores (Hordeum vulgare L.).

Ritala A, Mannonen L, Oksman-Caldentey KM.

Plant Cell Rep. 2001 Jul;20(5):403-407. Epub 2014 Feb 15.

PMID:
24549447
36.

A major role of viruses in convulsive status epilepticus in children: a prospective study of 22 children.

Juntunen A, Herrgård E, Mannonen L, Korppi M, Linnavuori K, Vaheri A, Koskiniemi M.

Eur J Pediatr. 2001 Jan;160(1):37-42.

PMID:
11195016
37.

Detection of human herpesvirus 6 and varicella-zoster virus in tear fluid of patients with Bell's palsy by PCR.

Pitkäranta A, Piiparinen H, Mannonen L, Vesaluoma M, Vaheri A.

J Clin Microbiol. 2000 Jul;38(7):2753-5.

38.

Human herpesvirus-6 associated encephalitis with subsequent infantile spasms and cerebellar astrocytoma.

Rantala H, Mannonen L, Ahtiluoto S, Linnavuori K, Herva R, Vaheri A, Koskiniemi M.

Dev Med Child Neurol. 2000 Jun;42(6):418-21.

39.

Expression of fungal thermotolerant endo-1,4-beta-glucanase in transgenic barley seeds during germination.

Nuutila AM, Ritala A, Skadsen RW, Mannonen L, Kauppinen V.

Plant Mol Biol. 1999 Dec;41(6):777-83.

PMID:
10737142
40.

In situ hybridization detection of human herpesvirus 6 in brain tissue from fatal encephalitis.

Ahtiluoto S, Mannonen L, Paetau A, Vaheri A, Koskiniemi M, Rautiainen P, Muttilainen M.

Pediatrics. 2000 Feb;105(2):431-3.

PMID:
10654970
41.

Antibodies to varicella zoster virus in the cerebrospinal fluid of neonates with seizures.

Mustonen K, Mustakangas P, Smeds M, Mannonen L, Uotila L, Vaheri A, Koskiniemi M.

Arch Dis Child Fetal Neonatal Ed. 1998 Jan;78(1):F57-61.

42.

Chlamydia trachomatis detected in human placenta.

Gencay M, Puolakkainen M, Wahlström T, Ammälä P, Mannonen L, Vaheri A, Koskiniemi ML.

J Clin Pathol. 1997 Oct;50(10):852-5.

43.

Luminometric microplate hybridization for detection of varicella-zoster virus PCR product from cerebrospinal fluid.

Koskiniemi M, Mannonen L, Kallio A, Vaheri A.

J Virol Methods. 1997 Jan;63(1-2):71-9.

PMID:
9015277
44.

The genome sizes of Hordeum species show considerable variation.

Kankanpää J, Schulman AH, Mannonen L.

Genome. 1996 Aug;39(4):730-5.

PMID:
18469933
45.
46.

Transgenic barley (Hordeum vulgare L.) by electroporation of protoplasts.

Salmenkallio-Marttila M, Aspegren K, Akerman S, Kurtén U, Mannonen L, Ritala A, Teeri TH, Kauppinen V.

Plant Cell Rep. 1995 Dec;15(3-4):301-4. doi: 10.1007/BF00193741.

PMID:
24185797
47.

Fertile transgenic barley to particle bombardment of immature embryos.

Ritala A, Aspegren K, Kurtén U, Salmenkallio-Marttila M, Mannonen L, Hannus R, Kauppinen V, Teeri TH, Enari TM.

Plant Mol Biol. 1994 Jan;24(2):317-25.

PMID:
8111034
48.

Stable transformation of barley tissue culture by particle bombardment.

Ritala A, Mannonen L, Aspegren K, Salmenkallio-Marttila M, Kurtén U, Hannus R, Mendez Lozano J, Teeri TH, Kauppinen V.

Plant Cell Rep. 1993 May;12(7-8):435-40. doi: 10.1007/BF00234708.

PMID:
24197348
49.

Effects of long-term preservation on growth and productivity of Panax ginseng and Catharanthus roseus cell cultures.

Mannonen L, Toivonen L, Kauppinen V.

Plant Cell Rep. 1990 Aug;9(4):173-7. doi: 10.1007/BF00232173.

PMID:
24226696

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