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Hospital-specific antibiograms and antibiotic prophylaxis for prostate biopsies: a reexamination of AUA recommendations.

Mann M, Calio BP, Mark JR, Chelluri R, Hufnagel E, Reese A, Lallas CD, Trabulsi EJ, Chandrasekar T, Shenot PJ, Halpern E, Gomella LG.

Can J Urol. 2020 Feb;27(1):10099-10104.


Role for ribosome-associated quality control in sampling proteins for MHC class I-mediated antigen presentation.

Trentini DB, Pecoraro M, Tiwary S, Cox J, Mann M, Hipp MS, Hartl FU.

Proc Natl Acad Sci U S A. 2020 Feb 11. pii: 201914401. doi: 10.1073/pnas.1914401117. [Epub ahead of print]


Statistical analysis plan for the randomized controlled trial CardioCare MV investigating a novel integrated care concept (NICC) for patients suffering from chronic cardiovascular disease.

Ziegler A, Mann M, Brandewiede B, Dittrich H, Hintz S, Krockenberger K, Öner A, de Sousa MO, Schmidt C.

Trials. 2020 Feb 3;21(1):131. doi: 10.1186/s13063-020-4052-6.


Quantitative and Dynamic Catalogs of Proteins Released during Apoptotic and Necroptotic Cell Death.

Tanzer MC, Frauenstein A, Stafford CA, Phulphagar K, Mann M, Meissner F.

Cell Rep. 2020 Jan 28;30(4):1260-1270.e5. doi: 10.1016/j.celrep.2019.12.079.


Type 1 diabetes mellitus and educational attainment in childhood: a systematic review.

Oakley NJ, Kneale D, Mann M, Hilliar M, Dayan C, Gregory JW, French R.

BMJ Open. 2020 Jan 26;10(1):e033215. doi: 10.1136/bmjopen-2019-033215.


Atorvastatin for prevention of disease progression and hospitalisation in liver cirrhosis: protocol for a randomised, double-blind, placebo-controlled trial.

Kimer N, Grønbæk H, Fred RG, Hansen T, Deshmukh AS, Mann M, Bendtsen F.

BMJ Open. 2020 Jan 23;10(1):e035284. doi: 10.1136/bmjopen-2019-035284.


Trapped ion mobility spectrometry and PASEF enable in-depth lipidomics from minimal sample amounts.

Vasilopoulou CG, Sulek K, Brunner AD, Meitei NS, Schweiger-Hufnagel U, Meyer SW, Barsch A, Mann M, Meier F.

Nat Commun. 2020 Jan 16;11(1):331. doi: 10.1038/s41467-019-14044-x.


Detection of spreading depolarizations in a middle cerebral artery occlusion model in swine.

Kentar M, Mann M, Sahm F, Olivares-Rivera A, Sanchez-Porras R, Zerelles R, Sakowitz OW, Unterberg AW, Santos E.

Acta Neurochir (Wien). 2020 Jan 15. doi: 10.1007/s00701-019-04132-8. [Epub ahead of print]


School Climate as an Intervention to Reduce Academic Failure and Educate the Whole Child: A Longitudinal Study.

Daily SM, Mann MJ, Lilly CL, Dyer AM, Smith ML, Kristjansson AL.

J Sch Health. 2020 Mar;90(3):182-193. doi: 10.1111/josh.12863. Epub 2020 Jan 5.


Absence of internal multidecadal and interdecadal oscillations in climate model simulations.

Mann ME, Steinman BA, Miller SK.

Nat Commun. 2020 Jan 3;11(1):49. doi: 10.1038/s41467-019-13823-w.


Quick and clean: Cracking sentences encoded in E. coli by LC-MS/MS, de novo sequencing, and dictionary search.

Niu L, Mann M.

EuPA Open Proteom. 2019 Jul 29;22-23:30-35. doi: 10.1016/j.euprot.2019.07.010. eCollection 2019 Mar.


Assessing the quality of fresh Whitemouth croaker (Micropogonias furnieri) meat based on micro-organism and histamine analysis using NGS, qPCR and HPLC-DAD.

de Lira AD, Kothe CI, Rué O, Midoux C, Mann MB, Mallmann LP, de Castro ÍMS, Frazzon APG, Frazzon J.

J Appl Microbiol. 2019 Dec 28. doi: 10.1111/jam.14566. [Epub ahead of print]


The gastrocnemiofibular ligament: A new, more anatomically accurate name for the fabellofibular ligament-An original magnetic resonance imaging study and meta-analysis.

Pękala PA, Mann MR, Pękala JR, Loukas M, Wojciechowski W, Walocha JA, Tomaszewski KA.

Clin Anat. 2019 Dec 27. doi: 10.1002/ca.23542. [Epub ahead of print]


Holographic waveguide HUD with in-line pupil expansion and 2D FOV expansion.

Bigler CM, Mann MS, Blanche PA.

Appl Opt. 2019 Dec 1;58(34):G326-G331. doi: 10.1364/AO.58.00G326.


A phase 1 study of the antibody-drug conjugate brentuximab vedotin with re-induction chemotherapy in patients with CD30-expressing relapsed/refractory acute myeloid leukemia.

Narayan R, Blonquist TM, Emadi A, Hasserjian RP, Burke M, Lescinskas C, Neuberg DS, Brunner AM, Hobbs G, Hock H, McAfee SL, Chen YB, Attar E, Graubert TA, Bertoli C, Moran JA, Bergeron MK, Foster JE, Ramos AY, Som TT, Vartanian MK, Story JL, McGregor K, Macrae M, Behnan T, Wey MC, Rae J, Preffer FI, Lesho P, Duong VH, Mann ML, Ballen KK, Connolly C, Amrein PC, Fathi AT.

Cancer. 2019 Dec 20. doi: 10.1002/cncr.32657. [Epub ahead of print]


Infiltration Depth is the Most Relevant Risk Factor for Overall Metastases in Early Esophageal Adenocarcinoma.

Oetzmann von Sochaczewski C, Haist T, Pauthner M, Mann M, Braun S, Ell C, Lorenz D.

World J Surg. 2019 Dec 18. doi: 10.1007/s00268-019-05291-6. [Epub ahead of print]


Mesothelial Cell HIF1α Expression Is Metabolically Downregulated by Metformin to Prevent Oncogenic Tumor-Stromal Crosstalk.

Hart PC, Kenny HA, Grassl N, Watters KM, Litchfield LM, Coscia F, Blaženović I, Ploetzky L, Fiehn O, Mann M, Lengyel E, Romero IL.

Cell Rep. 2019 Dec 17;29(12):4086-4098.e6. doi: 10.1016/j.celrep.2019.11.079.


Proteomics of Cytochrome c Oxidase-Negative versus -Positive Muscle Fiber Sections in Mitochondrial Myopathy.

Murgia M, Tan J, Geyer PE, Doll S, Mann M, Klopstock T.

Cell Rep. 2019 Dec 17;29(12):3825-3834.e4. doi: 10.1016/j.celrep.2019.11.055.


Palliative Care Evidence Review Service (PaCERS): a knowledge transfer partnership.

Mann M, Woodward A, Nelson A, Byrne A.

Health Res Policy Syst. 2019 Dec 16;17(1):100. doi: 10.1186/s12961-019-0504-4.


Prevention Is Possible: A Brief History of the Origin and Dissemination of the Icelandic Prevention Model.

Sigfusdottir ID, Soriano HE, Mann MJ, Kristjansson AL.

Health Promot Pract. 2020 Jan;21(1):58-61. doi: 10.1177/1524839919886314.


The polar regions in a 2°C warmer world.

Post E, Alley RB, Christensen TR, Macias-Fauria M, Forbes BC, Gooseff MN, Iler A, Kerby JT, Laidre KL, Mann ME, Olofsson J, Stroeve JC, Ulmer F, Virginia RA, Wang M.

Sci Adv. 2019 Dec 4;5(12):eaaw9883. doi: 10.1126/sciadv.aaw9883. eCollection 2019 Dec. Review.


SHP1 regulates a STAT6-ITGB3 axis in FLT3ITD-positive AML cells.

Reich D, Kresinsky A, Müller JP, Bauer R, Kallenbach J, Schnoeder TM, Heidel FH, Fässler R, Mann M, Böhmer FD, Jayavelu AK.

Leukemia. 2019 Dec 13. doi: 10.1038/s41375-019-0676-5. [Epub ahead of print] No abstract available.


What patients want to ask their doctors: Data analysis from Question Builder, an online question prompt list tool.

Tracy MC, Shepherd HL, Ivers RG, Mann M, Chiappini L, Trevena LJ.

Patient Educ Couns. 2019 Nov 23. pii: S0738-3991(19)30530-0. doi: 10.1016/j.pec.2019.11.023. [Epub ahead of print]


Associations between school-based peer networks and smoking according to socioeconomic status and tobacco control context: protocol for a mixed method systematic review.

Littlecott HJ, Hawkins J, Mann M, Melendez-Torres GJ, Dobbie F, Moore G.

Syst Rev. 2019 Dec 6;8(1):313. doi: 10.1186/s13643-019-1225-z.


Comparison of Conventional TNM and Novel TNMB Staging Systems for Non-Small Cell Lung Cancer.

Haro GJ, Sheu B, Cook NR, Woodard GA, Mann MJ, Kratz JR.

JAMA Netw Open. 2019 Dec 2;2(12):e1917062. doi: 10.1001/jamanetworkopen.2019.17062.


Myeloid cell-targeted miR-146a mimic inhibits NF-κB-driven inflammation and leukemia progression in vivo.

Su YL, Wang X, Mann M, Adamus TP, Wang D, Moreira DF, Zhang Z, Ouyang C, He X, Zhang B, Swiderski PM, Forman SJ, Baltimore D, Li L, Marcucci G, Boldin MP, Kortylewski M.

Blood. 2020 Jan 16;135(3):167-180. doi: 10.1182/blood.2019002045.


Sebaceous carcinoma: evidence-based clinical practice guidelines.

Owen JL, Kibbi N, Worley B, Kelm RC, Wang JV, Barker CA, Behshad R, Bichakjian CK, Bolotin D, Bordeaux JS, Bradshaw SH, Cartee TV, Chandra S, Cho NL, Choi JN, Council ML, Demirci H, Eisen DB, Esmaeli B, Golda N, Huang CC, Ibrahim SF, Jiang SB, Kim J, Kuzel TM, Lai SY, Lawrence N, Lee EH, Leitenberger JJ, Maher IA, Mann MW, Minkis K, Mittal BB, Nehal KS, Neuhaus IM, Ozog DM, Petersen B, Rotemberg V, Samant S, Samie FH, Servaes S, Shields CL, Shin TM, Sobanko JF, Somani AK, Stebbins WG, Thomas JR, Thomas VD, Tse DT, Waldman AH, Wong MK, Xu YG, Yu SS, Zeitouni NC, Ramsay T, Reynolds KA, Poon E, Alam M.

Lancet Oncol. 2019 Dec;20(12):e699-e714. doi: 10.1016/S1470-2045(19)30673-4. Review.


Perturbations in imprinted methylation from assisted reproductive technologies but not advanced maternal age in mouse preimplantation embryos.

Kindsfather AJ, Czekalski MA, Pressimone CA, Erisman MP, Mann MRW.

Clin Epigenetics. 2019 Nov 26;11(1):162. doi: 10.1186/s13148-019-0751-9.


A mass spectrometry guided approach for the identification of novel vaccine candidates in gram-negative pathogens.

Hornburg D, Kruse T, Anderl F, Daschkin C, Semper RP, Klar K, Guenther A, Mejías-Luque R, Schneiderhan-Marra N, Mann M, Meissner F, Gerhard M.

Sci Rep. 2019 Nov 22;9(1):17401. doi: 10.1038/s41598-019-53493-8.


An expert panel consensus on opioid-prescribing guidelines for dermatologic procedures.

McLawhorn JM, Stephany MP, Bruhn WE, Crow LD, Coldiron BM, Hruza GJ, Leach BC, Soon SL, Friedmann DP, Stebbins WG, Blalock TW, Graves MS, Billingsley EM, Knackstedt TJ, Miller SJ, Yob EH, Albertini JG, Zeitouni N, Krathen RA, Bichakjian CK, Jellinek NJ, Hanke CW, Samie FH, Mann MW, Carucci JA, Kakar R, Saylor DK, Fosko SW, Ortiz AE, Henghold WB, Jennings TA, Davis DS, Maloney ME, Curcio NM, Behshad R, Tope WD, McCoppin H, Levin JI, Collins L, Stasko T; Opioid-Prescribing in Dermatology Workgroup.

J Am Acad Dermatol. 2020 Mar;82(3):700-708. doi: 10.1016/j.jaad.2019.09.080. Epub 2019 Nov 12.


Improper Potency and Impurities in Compounded Polidocanol

Mann M, Munavalli GS, Amatangelo L, Morrison N.

J Drugs Dermatol. 2019 Nov 1;18(11):1124-1127.


Alternative splicing coupled with transcript degradation modulates OAS1g antiviral activity.

Frankiw L, Mann M, Li G, Joglekar A, Baltimore D.

RNA. 2020 Feb;26(2):126-136. doi: 10.1261/rna.073825.119. Epub 2019 Nov 18.


Optimising paediatric afferent component early warning systems: a hermeneutic systematic literature review and model development.

Jacob N, Moriarty Y, Lloyd A, Mann M, Tume LN, Sefton G, Powell C, Roland D, Trubey R, Hood K, Allen D.

BMJ Open. 2019 Nov 14;9(11):e028796. doi: 10.1136/bmjopen-2018-028796.


Prevalence and clinical associations of Staphylococcus aureus small-colony variant respiratory infection in children with cystic fibrosis (SCVSA): a multicentre, observational study.

Wolter DJ, Onchiri FM, Emerson J, Precit MR, Lee M, McNamara S, Nay L, Blackledge M, Uluer A, Orenstein DM, Mann M, Hoover W, Gibson RL, Burns JL, Hoffman LR; SCVSA study group.

Lancet Respir Med. 2019 Dec;7(12):1027-1038. doi: 10.1016/S2213-2600(19)30365-0. Epub 2019 Nov 11.


Prospective study to define the clinical utility and benefit of Decipher testing in men following prostatectomy.

Marascio J, Spratt DE, Zhang J, Trabulsi EJ, Le T, Sedzorme WS, Beeler WH, Davicioni E, Dabbas B, Lin DW, Gore JL, Bloom M, Mann M, Mark JR, Calvaresi A, Godwin JL, McCue P, Hurwitz MD, Kelly WK, Lallas CD, Knudsen KE, Gomella LG, Dicker AP, Den RB.

Prostate Cancer Prostatic Dis. 2019 Nov 12. doi: 10.1038/s41391-019-0185-7. [Epub ahead of print]


Defective glycosylation and multisystem abnormalities characterize the primary immunodeficiency XMEN disease.

Ravell JC, Matsuda-Lennikov M, Chauvin SD, Zou J, Biancalana M, Deeb SJ, Price S, Su HC, Notarangelo G, Jiang P, Morawski A, Kanellopoulou C, Binder K, Mukherjee R, Anibal JT, Sellers B, Zheng L, He T, George AB, Pittaluga S, Powers A, Kleiner DE, Kapuria D, Ghany M, Hunsberger S, Cohen JI, Uzel G, Bergerson J, Wolfe L, Toro C, Gahl W, Folio LR, Matthews H, Angelus P, Chinn IK, Orange JS, Trujillo-Vargas CM, Franco JL, Orrego-Arango J, Gutiérrez-Hincapié S, Patel NC, Raymond K, Patiroglu T, Unal E, Karakukcu M, Day AG, Mehta P, Masutani E, De Ravin SS, Malech HL, Altan-Bonnet G, Rao VK, Mann M, Lenardo MJ.

J Clin Invest. 2020 Jan 2;130(1):507-522. doi: 10.1172/JCI131116.


Collagen IV (COL4A1, COL4A2), a Component of the Viral Biofilm, Is Induced by the HTLV-1 Oncoprotein Tax and Impacts Virus Transmission.

Millen S, Gross C, Donhauser N, Mann MC, Péloponèse JM Jr, Thoma-Kress AK.

Front Microbiol. 2019 Oct 23;10:2439. doi: 10.3389/fmicb.2019.02439. eCollection 2019.


Interconversion between Anticipatory and Active GID E3 Ubiquitin Ligase Conformations via Metabolically Driven Substrate Receptor Assembly.

Qiao S, Langlois CR, Chrustowicz J, Sherpa D, Karayel O, Hansen FM, Beier V, von Gronau S, Bollschweiler D, Schäfer T, Alpi AF, Mann M, Prabu JR, Schulman BA.

Mol Cell. 2020 Jan 2;77(1):150-163.e9. doi: 10.1016/j.molcel.2019.10.009. Epub 2019 Nov 7.


Using a Reconciliation Module Leads to Large Gains in Evolution Acceptance.

Lindsay J, Arok A, Bybee SM, Cho W, Cordero AM, Ferguson DG, Galante LL, Gill R, Mann M, Peck SL, Shively CL, Stark MR, Stowers JA, Tenneson M, Tolman ER, Wayment T, Jensen JL.

CBE Life Sci Educ. 2019 Dec;18(4):ar58. doi: 10.1187/cbe.19-04-0080.


Differential gene expression identifies KRT7 and MUC1 as potential metastasis-specific targets in sarcoma.

Jiang L, Tolani B, Yeh CC, Fan Y, Reza JA, Horvai AE, Xia E, Kratz JR, Jablons DM, Mann MJ.

Cancer Manag Res. 2019 Sep 9;11:8209-8218. doi: 10.2147/CMAR.S218676. eCollection 2019.


Systematic review of behavioural smoking cessation interventions for older smokers from deprived backgrounds.

Smith P, Poole R, Mann M, Nelson A, Moore G, Brain K.

BMJ Open. 2019 Nov 2;9(11):e032727. doi: 10.1136/bmjopen-2019-032727.


Proteomics-Based Comparative Mapping of the Secretomes of Human Brown and White Adipocytes Reveals EPDR1 as a Novel Batokine.

Deshmukh AS, Peijs L, Beaudry JL, Jespersen NZ, Nielsen CH, Ma T, Brunner AD, Larsen TJ, Bayarri-Olmos R, Prabhakar BS, Helgstrand C, Severinsen MCK, Holst B, Kjaer A, Tang-Christensen M, Sanfridson A, Garred P, Privé GG, Pedersen BK, Gerhart-Hines Z, Nielsen S, Drucker DJ, Mann M, Scheele C.

Cell Metab. 2019 Nov 5;30(5):963-975.e7. doi: 10.1016/j.cmet.2019.10.001. Epub 2019 Oct 24.


Discovery of Small Molecule Antagonists of the USP5 Zinc Finger Ubiquitin-Binding Domain.

Mann MK, Franzoni I, de Freitas RF, Tempel W, Houliston S, Smith L, Vedadi M, Arrowsmith CH, Harding RJ, Schapira M.

J Med Chem. 2019 Nov 27;62(22):10144-10155. doi: 10.1021/acs.jmedchem.9b00988. Epub 2019 Nov 12.


Addressing the Health Risks of Climate Change in Older Adults.

McDermott-Levy R, Kolanowski AM, Fick DM, Mann ME.

J Gerontol Nurs. 2019 Nov 1;45(11):21-29. doi: 10.3928/00989134-20191011-04.


Factors associated with diverticular bleeding and re-bleeding: A United States hospital study.

Jalil AA, Gorski R, Jalil SA, Cronin R, Comianos M, Mann M, Rajagopalan H, Jalil AA, Tahan V.

North Clin Istanb. 2018 Sep 5;6(3):248-253. doi: 10.14744/nci.2018.23540. eCollection 2019.


Response to Raaijmakers & Medema.

Zhang G, Kruse T, Boldú CG, Garvanska DH, Coscia F, Mann M, Barisic M, Nilsson J.

EMBO J. 2019 Nov 15;38(22):e103547. doi: 10.15252/embj.2019103547. Epub 2019 Oct 22. No abstract available.


SILAC-based quantitative proteomics using mass spectrometry quantifies endoplasmic reticulum stress in whole HeLa cells.

Itzhak DN, Sacco F, Nagaraj N, Tyanova S, Mann M, Murgia M.

Dis Model Mech. 2019 Nov 11;12(11). pii: dmm040741. doi: 10.1242/dmm.040741.


Sleep-wake cycles drive daily dynamics of synaptic phosphorylation.

Brüning F, Noya SB, Bange T, Koutsouli S, Rudolph JD, Tyagarajan SK, Cox J, Mann M, Brown SA, Robles MS.

Science. 2019 Oct 11;366(6462). pii: eaav3617. doi: 10.1126/science.aav3617.


The forebrain synaptic transcriptome is organized by clocks but its proteome is driven by sleep.

Noya SB, Colameo D, Brüning F, Spinnler A, Mircsof D, Opitz L, Mann M, Tyagarajan SK, Robles MS, Brown SA.

Science. 2019 Oct 11;366(6462). pii: eaav2642. doi: 10.1126/science.aav2642.


Plasma Proteome Profiling to detect and avoid sample-related biases in biomarker studies.

Geyer PE, Voytik E, Treit PV, Doll S, Kleinhempel A, Niu L, Müller JB, Buchholtz ML, Bader JM, Teupser D, Holdt LM, Mann M.

EMBO Mol Med. 2019 Nov 7;11(11):e10427. doi: 10.15252/emmm.201910427. Epub 2019 Sep 30.

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