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Predation drives recurrent convergence of an interspecies mutualism.

Feeney WE, Brooker RM, Johnston LN, Gilbert JDJ, Besson M, Lecchini D, Dixson DL, Cowman PF, Manica A.

Ecol Lett. 2019 Feb;22(2):256-264. doi: 10.1111/ele.13184. Epub 2018 Nov 27.


Human variation in the shape of the birth canal is significant and geographically structured.

Betti L, Manica A.

Proc Biol Sci. 2018 Oct 24;285(1889). pii: 20181807. doi: 10.1098/rspb.2018.1807.


High-intensity intermittent exercise increases adenosine hydrolysis in platelets and lymphocytes and promotes platelet aggregation in futsal athletes.

Miron VV, Baldissarelli J, Pranke G, Mânica A, da Silva Rosa Bonadiman B, Manfredi LH, Morsch VM, Schetinger MRC, Machado Cardoso A.

Platelets. 2018 Oct 22:1-8. doi: 10.1080/09537104.2018.1529299. [Epub ahead of print]


A genomic Neolithic time transect of hunter-farmer admixture in central Poland.

Fernandes DM, Strapagiel D, Borówka P, Marciniak B, Żądzińska E, Sirak K, Siska V, Grygiel R, Carlsson J, Manica A, Lorkiewicz W, Pinhasi R.

Sci Rep. 2018 Oct 5;8(1):14879. doi: 10.1038/s41598-018-33067-w.


Global demographic history of human populations inferred from whole mitochondrial genomes.

Miller EF, Manica A, Amos W.

R Soc Open Sci. 2018 Aug 22;5(8):180543. doi: 10.1098/rsos.180543. eCollection 2018 Aug.


Quantifying individual specialization using tracking data: a case study on two species of albatrosses.

Bonnet-Lebrun AS, Phillips RA, Manica A, Rodrigues ASL.

Mar Biol. 2018;165(10):152. doi: 10.1007/s00227-018-3408-x. Epub 2018 Sep 8.


The Impact of Purinergic System Enzymes on Noncommunicable, Neurological, and Degenerative Diseases.

Bagatini MD, Dos Santos AA, Cardoso AM, Mânica A, Reschke CR, Carvalho FB.

J Immunol Res. 2018 Aug 12;2018:4892473. doi: 10.1155/2018/4892473. eCollection 2018. Review.


Late Quaternary horses in Eurasia in the face of climate and vegetation change.

Leonardi M, Boschin F, Giampoudakis K, Beyer RM, Krapp M, Bendrey R, Sommer R, Boscato P, Manica A, Nogues-Bravo D, Orlando L.

Sci Adv. 2018 Jul 25;4(7):eaar5589. doi: 10.1126/sciadv.aar5589. eCollection 2018 Jul.


Acute responses of hemodynamic and oxidative stress parameters to aerobic exercise with blood flow restriction in hypertensive elderly women.

Barili A, Corralo VDS, Cardoso AM, Mânica A, Bonadiman BDSR, Bagatini MD, Da Silva-Grigoletto ME, de Oliveira GG, De Sá CA.

Mol Biol Rep. 2018 Oct;45(5):1099-1109. doi: 10.1007/s11033-018-4261-1. Epub 2018 Jul 20.


Did Our Species Evolve in Subdivided Populations across Africa, and Why Does It Matter?

Scerri EML, Thomas MG, Manica A, Gunz P, Stock JT, Stringer C, Grove M, Groucutt HS, Timmermann A, Rightmire GP, d'Errico F, Tryon CA, Drake NA, Brooks AS, Dennell RW, Durbin R, Henn BM, Lee-Thorp J, deMenocal P, Petraglia MD, Thompson JC, Scally A, Chikhi L.

Trends Ecol Evol. 2018 Aug;33(8):582-594. doi: 10.1016/j.tree.2018.05.005. Epub 2018 Jul 11.


Ancient goat genomes reveal mosaic domestication in the Fertile Crescent.

Daly KG, Maisano Delser P, Mullin VE, Scheu A, Mattiangeli V, Teasdale MD, Hare AJ, Burger J, Verdugo MP, Collins MJ, Kehati R, Erek CM, Bar-Oz G, Pompanon F, Cumer T, Çakırlar C, Mohaseb AF, Decruyenaere D, Davoudi H, Çevik Ö, Rollefson G, Vigne JD, Khazaeli R, Fathi H, Doost SB, Rahimi Sorkhani R, Vahdati AA, Sauer EW, Azizi Kharanaghi H, Maziar S, Gasparian B, Pinhasi R, Martin L, Orton D, Arbuckle BS, Benecke N, Manica A, Horwitz LK, Mashkour M, Bradley DG.

Science. 2018 Jul 6;361(6397):85-88. doi: 10.1126/science.aas9411.


Ancient human parallel lineages within North America contributed to a coastal expansion.

Scheib CL, Li H, Desai T, Link V, Kendall C, Dewar G, Griffith PW, Mörseburg A, Johnson JR, Potter A, Kerr SL, Endicott P, Lindo J, Haber M, Xue Y, Tyler-Smith C, Sandhu MS, Lorenz JG, Randall TD, Faltyskova Z, Pagani L, Danecek P, O'Connell TC, Martz P, Boraas AS, Byrd BF, Leventhal A, Cambra R, Williamson R, Lesage L, Holguin B, Ygnacio-De Soto E, Rosas J, Metspalu M, Stock JT, Manica A, Scally A, Wegmann D, Malhi RS, Kivisild T.

Science. 2018 Jun 1;360(6392):1024-1027. doi: 10.1126/science.aar6851.


Energy efficiency drives the global seasonal distribution of birds.

Somveille M, Rodrigues ASL, Manica A.

Nat Ecol Evol. 2018 Jun;2(6):962-969. doi: 10.1038/s41559-018-0556-9. Epub 2018 May 7.


Repeatable group differences in the collective behaviour of stickleback shoals across ecological contexts.

Jolles JW, Laskowski KL, Boogert NJ, Manica A.

Proc Biol Sci. 2018 Feb 14;285(1872). pii: 20172629. doi: 10.1098/rspb.2017.2629.


Infections on the move: how transient phases of host movement influence disease spread.

Daversa DR, Fenton A, Dell AI, Garner TWJ, Manica A.

Proc Biol Sci. 2017 Dec 20;284(1869). pii: 20171807. doi: 10.1098/rspb.2017.1807. Review.


High levels of extracellular ATP lead to chronic inflammatory response in melanoma patients.

Manica A, Da Silva AM, Cardoso AM, Moreno M, Leal DB, Dutra Da Silva A, Schetinger MRC, Morsch VMM, Bagatini MD.

J Cell Biochem. 2018 May;119(5):3980-3988. doi: 10.1002/jcb.26551. Epub 2018 Jan 22.


Estimating mobility using sparse data: Application to human genetic variation.

Loog L, Mirazón Lahr M, Kovacevic M, Manica A, Eriksson A, Thomas MG.

Proc Natl Acad Sci U S A. 2017 Nov 14;114(46):12213-12218. doi: 10.1073/pnas.1703642114. Epub 2017 Oct 30.


Turn-taking in cooperative offspring care: by-product of individual provisioning behavior or active response rule?

Savage JL, Browning LE, Manica A, Russell AF, Johnstone RA.

Behav Ecol Sociobiol. 2017;71(11):162. doi: 10.1007/s00265-017-2391-4. Epub 2017 Oct 17.


Corrigendum: An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.

Cho YS, Kim H, Kim HM, Jho S, Jun J, Lee YJ, Chae KS, Kim CG, Kim S, Eriksson A, Edwards JS, Lee S, Kim BC, Manica A, Oh TK, Church GM, Bhak J.

Nat Commun. 2017 Oct 9;8:16168. doi: 10.1038/ncomms16168.


Ancient genomes show social and reproductive behavior of early Upper Paleolithic foragers.

Sikora M, Seguin-Orlando A, Sousa VC, Albrechtsen A, Korneliussen T, Ko A, Rasmussen S, Dupanloup I, Nigst PR, Bosch MD, Renaud G, Allentoft ME, Margaryan A, Vasilyev SV, Veselovskaya EV, Borutskaya SB, Deviese T, Comeskey D, Higham T, Manica A, Foley R, Meltzer DJ, Nielsen R, Excoffier L, Mirazon Lahr M, Orlando L, Willerslev E.

Science. 2017 Nov 3;358(6363):659-662. doi: 10.1126/science.aao1807. Epub 2017 Oct 5.


Consistent Individual Differences Drive Collective Behavior and Group Functioning of Schooling Fish.

Jolles JW, Boogert NJ, Sridhar VH, Couzin ID, Manica A.

Curr Biol. 2017 Sep 25;27(18):2862-2868.e7. doi: 10.1016/j.cub.2017.08.004. Epub 2017 Sep 7.


An earlier revolution: genetic and genomic analyses reveal pre-existing cultural differences leading to Neolithization.

Leonardi M, Barbujani G, Manica A.

Sci Rep. 2017 Jun 14;7(1):3525. doi: 10.1038/s41598-017-03717-6. Erratum in: Sci Rep. 2018 Jan 9;8(1):682.


Land-use strategies to balance livestock production, biodiversity conservation and carbon storage in Yucatán, Mexico.

Williams DR, Alvarado F, Green RE, Manica A, Phalan B, Balmford A.

Glob Chang Biol. 2017 Dec;23(12):5260-5272. doi: 10.1111/gcb.13791. Epub 2017 Jul 10.


Paleogenomic Evidence for Multi-generational Mixing between Neolithic Farmers and Mesolithic Hunter-Gatherers in the Lower Danube Basin.

González-Fortes G, Jones ER, Lightfoot E, Bonsall C, Lazar C, Grandal-d'Anglade A, Garralda MD, Drak L, Siska V, Simalcsik A, Boroneanţ A, Vidal Romaní JR, Vaqueiro Rodríguez M, Arias P, Pinhasi R, Manica A, Hofreiter M.

Curr Biol. 2017 Jun 19;27(12):1801-1810.e10. doi: 10.1016/j.cub.2017.05.023. Epub 2017 May 25.


Inferring Allele Frequency Trajectories from Ancient DNA Indicates That Selection on a Chicken Gene Coincided with Changes in Medieval Husbandry Practices.

Loog L, Thomas MG, Barnett R, Allen R, Sykes N, Paxinos PD, Lebrasseur O, Dobney K, Peters J, Manica A, Larson G, Eriksson A.

Mol Biol Evol. 2017 Aug 1;34(8):1981-1990. doi: 10.1093/molbev/msx142.


Empirical phylogenies and species abundance distributions are consistent with preequilibrium dynamics of neutral community models with gene flow.

Bonnet-Lebrun AS, Manica A, Eriksson A, Rodrigues ASL.

Evolution. 2017 May;71(5):1149-1163. doi: 10.1111/evo.13228. Epub 2017 May 4.


Genome-wide data from two early Neolithic East Asian individuals dating to 7700 years ago.

Siska V, Jones ER, Jeon S, Bhak Y, Kim HM, Cho YS, Kim H, Lee K, Veselovskaya E, Balueva T, Gallego-Llorente M, Hofreiter M, Bradley DG, Eriksson A, Pinhasi R, Bhak J, Manica A.

Sci Adv. 2017 Feb 1;3(2):e1601877. doi: 10.1126/sciadv.1601877. eCollection 2017 Feb.


The Neolithic Transition in the Baltic Was Not Driven by Admixture with Early European Farmers.

Jones ER, Zarina G, Moiseyev V, Lightfoot E, Nigst PR, Manica A, Pinhasi R, Bradley DG.

Curr Biol. 2017 Feb 20;27(4):576-582. doi: 10.1016/j.cub.2016.12.060. Epub 2017 Feb 2.


An ethnically relevant consensus Korean reference genome is a step towards personal reference genomes.

Cho YS, Kim H, Kim HM, Jho S, Jun J, Lee YJ, Chae KS, Kim CG, Kim S, Eriksson A, Edwards JS, Lee S, Kim BC, Manica A, Oh TK, Church GM, Bhak J.

Nat Commun. 2016 Nov 24;7:13637. doi: 10.1038/ncomms13637. Erratum in: Nat Commun. 2017 Oct 09;8:16168.


Comparison of carnivore, omnivore, and herbivore mammalian genomes with a new leopard assembly.

Kim S, Cho YS, Kim HM, Chung O, Kim H, Jho S, Seomun H, Kim J, Bang WY, Kim C, An J, Bae CH, Bhak Y, Jeon S, Yoon H, Kim Y, Jun J, Lee H, Cho S, Uphyrkina O, Kostyria A, Goodrich J, Miquelle D, Roelke M, Lewis J, Yurchenko A, Bankevich A, Cho J, Lee S, Edwards JS, Weber JA, Cook J, Kim S, Lee H, Manica A, Lee I, O'Brien SJ, Bhak J, Yeo JH.

Genome Biol. 2016 Oct 11;17(1):211.


Estimating economic losses to tourism in Africa from the illegal killing of elephants.

Naidoo R, Fisher B, Manica A, Balmford A.

Nat Commun. 2016 Nov 1;7:13379. doi: 10.1038/ncomms13379.


A genomic history of Aboriginal Australia.

Malaspinas AS, Westaway MC, Muller C, Sousa VC, Lao O, Alves I, Bergström A, Athanasiadis G, Cheng JY, Crawford JE, Heupink TH, Macholdt E, Peischl S, Rasmussen S, Schiffels S, Subramanian S, Wright JL, Albrechtsen A, Barbieri C, Dupanloup I, Eriksson A, Margaryan A, Moltke I, Pugach I, Korneliussen TS, Levkivskyi IP, Moreno-Mayar JV, Ni S, Racimo F, Sikora M, Xue Y, Aghakhanian FA, Brucato N, Brunak S, Campos PF, Clark W, Ellingvåg S, Fourmile G, Gerbault P, Injie D, Koki G, Leavesley M, Logan B, Lynch A, Matisoo-Smith EA, McAllister PJ, Mentzer AJ, Metspalu M, Migliano AB, Murgha L, Phipps ME, Pomat W, Reynolds D, Ricaut FX, Siba P, Thomas MG, Wales T, Wall CM, Oppenheimer SJ, Tyler-Smith C, Durbin R, Dortch J, Manica A, Schierup MH, Foley RA, Lahr MM, Bowern C, Wall JD, Mailund T, Stoneking M, Nielsen R, Sandhu MS, Excoffier L, Lambert DM, Willerslev E.

Nature. 2016 Oct 13;538(7624):207-214. doi: 10.1038/nature18299. Epub 2016 Sep 21.


Genomic analyses inform on migration events during the peopling of Eurasia.

Pagani L, Lawson DJ, Jagoda E, Mörseburg A, Eriksson A, Mitt M, Clemente F, Hudjashov G, DeGiorgio M, Saag L, Wall JD, Cardona A, Mägi R, Wilson Sayres MA, Kaewert S, Inchley C, Scheib CL, Järve M, Karmin M, Jacobs GS, Antao T, Iliescu FM, Kushniarevich A, Ayub Q, Tyler-Smith C, Xue Y, Yunusbayev B, Tambets K, Mallick CB, Saag L, Pocheshkhova E, Andriadze G, Muller C, Westaway MC, Lambert DM, Zoraqi G, Turdikulova S, Dalimova D, Sabitov Z, Sultana GNN, Lachance J, Tishkoff S, Momynaliev K, Isakova J, Damba LD, Gubina M, Nymadawa P, Evseeva I, Atramentova L, Utevska O, Ricaut FX, Brucato N, Sudoyo H, Letellier T, Cox MP, Barashkov NA, Skaro V, Mulahasanovic L, Primorac D, Sahakyan H, Mormina M, Eichstaedt CA, Lichman DV, Abdullah S, Chaubey G, Wee JTS, Mihailov E, Karunas A, Litvinov S, Khusainova R, Ekomasova N, Akhmetova V, Khidiyatova I, Marjanović D, Yepiskoposyan L, Behar DM, Balanovska E, Metspalu A, Derenko M, Malyarchuk B, Voevoda M, Fedorova SA, Osipova LP, Lahr MM, Gerbault P, Leavesley M, Migliano AB, Petraglia M, Balanovsky O, Khusnutdinova EK, Metspalu E, Thomas MG, Manica A, Nielsen R, Villems R, Willerslev E, Kivisild T, Metspalu M.

Nature. 2016 Oct 13;538(7624):238-242. doi: 10.1038/nature19792. Epub 2016 Sep 21.


The genetics of an early Neolithic pastoralist from the Zagros, Iran.

Gallego-Llorente M, Connell S, Jones ER, Merrett DC, Jeon Y, Eriksson A, Siska V, Gamba C, Meiklejohn C, Beyer R, Jeon S, Cho YS, Hofreiter M, Bhak J, Manica A, Pinhasi R.

Sci Rep. 2016 Aug 9;6:31326. doi: 10.1038/srep31326.


Proximate drivers of spatial segregation in non-breeding albatrosses.

Clay TA, Manica A, Ryan PG, Silk JR, Croxall JP, Ireland L, Phillips RA.

Sci Rep. 2016 Jul 21;6:29932. doi: 10.1038/srep29932.


Who directs group movement? Leader effort versus follower preference in stickleback fish of different personality.

Nakayama S, Harcourt JL, Johnstone RA, Manica A.

Biol Lett. 2016 May;12(5). pii: 20160207. doi: 10.1098/rsbl.2016.0207.


Recent social conditions affect boldness repeatability in individual sticklebacks.

Jolles JW, Aaron Taylor B, Manica A.

Anim Behav. 2016 Feb;112:139-145.


Food intake rates of inactive fish are positively linked to boldness in three-spined sticklebacks Gasterosteus aculeatus.

Jolles JW, Manica A, Boogert NJ.

J Fish Biol. 2016 Apr;88(4):1661-8. doi: 10.1111/jfb.12934. Epub 2016 Mar 4.


Surf and turf: predation by egg-eating snakes has led to the evolution of parental care in a terrestrial lizard.

Pike DA, Clark RW, Manica A, Tseng HY, Hsu JY, Huang WS.

Sci Rep. 2016 Feb 26;6:22207. doi: 10.1038/srep22207.


Inability of the most commonly used forensic genetic markers to distinguish between samples belonging to different ethnicities of Pakistan with diverse genetic background.

Chishti HM, Manica A, Ansar M, Eriksson A, Ajmal M, Hameed A.

Forensic Sci Int Genet. 2016 May;22:e7-e8. doi: 10.1016/j.fsigen.2016.01.006. Epub 2016 Jan 21. No abstract available.


Monophasic and biphasic shock for transthoracic conversion of atrial fibrillation: Systematic review and network meta-analysis.

Inácio JF, da Rosa Mdos S, Shah J, Rosário J, Vissoci JR, Manica AL, Rodrigues CG.

Resuscitation. 2016 Mar;100:66-75. doi: 10.1016/j.resuscitation.2015.12.009. Epub 2016 Jan 8. Review.


Upper Palaeolithic genomes reveal deep roots of modern Eurasians.

Jones ER, Gonzalez-Fortes G, Connell S, Siska V, Eriksson A, Martiniano R, McLaughlin RL, Gallego Llorente M, Cassidy LM, Gamba C, Meshveliani T, Bar-Yosef O, Müller W, Belfer-Cohen A, Matskevich Z, Jakeli N, Higham TF, Currat M, Lordkipanidze D, Hofreiter M, Manica A, Pinhasi R, Bradley DG.

Nat Commun. 2015 Nov 16;6:8912. doi: 10.1038/ncomms9912.


The first whole genome and transcriptome of the cinereous vulture reveals adaptation in the gastric and immune defense systems and possible convergent evolution between the Old and New World vultures.

Chung O, Jin S, Cho YS, Lim J, Kim H, Jho S, Kim HM, Jun J, Lee H, Chon A, Ko J, Edwards J, Weber JA, Han K, O'Brien SJ, Manica A, Bhak J, Paek WK.

Genome Biol. 2015 Oct 21;16:215. doi: 10.1186/s13059-015-0780-4.


Ancient Ethiopian genome reveals extensive Eurasian admixture throughout the African continent.

Gallego Llorente M, Jones ER, Eriksson A, Siska V, Arthur KW, Arthur JW, Curtis MC, Stock JT, Coltorti M, Pieruccini P, Stretton S, Brock F, Higham T, Park Y, Hofreiter M, Bradley DG, Bhak J, Pinhasi R, Manica A.

Science. 2015 Nov 13;350(6262):820-2. doi: 10.1126/science.aad2879. Epub 2015 Oct 8. Erratum in: Science. 2016 Feb 19;351(6275). pii: aaf3945. doi: 10.1126/science.aaf3945.


POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.

Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, de Barros Damgaard P, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CPE, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, Willerslev E.

Science. 2015 Aug 21;349(6250):aab3884. doi: 10.1126/science.aab3884. Epub 2015 Jul 21.


The Heptameric SmAP1 and SmAP2 Proteins of the Crenarchaeon Sulfolobus Solfataricus Bind to Common and Distinct RNA Targets.

Märtens B, Bezerra GA, Kreuter MJ, Grishkovskaya I, Manica A, Arkhipova V, Djinovic-Carugo K, Bläsi U.

Life (Basel). 2015 Apr 21;5(2):1264-81. doi: 10.3390/life5021264.


Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of Pakistan.

Ilyas M, Kim JS, Cooper J, Shin YA, Kim HM, Cho YS, Hwang S, Kim H, Moon J, Chung O, Jun J, Rastogi A, Song S, Ko J, Manica A, Rahman Z, Husnain T, Bhak J.

BMC Genomics. 2015 Mar 12;16:172. doi: 10.1186/s12864-015-1290-1.


Unravelling the genetic history of Negritos and indigenous populations of Southeast Asia.

Aghakhanian F, Yunus Y, Naidu R, Jinam T, Manica A, Hoh BP, Phipps ME.

Genome Biol Evol. 2015 Apr 14;7(5):1206-15. doi: 10.1093/gbe/evv065.


The evolution of parental care in insects: A test of current hypotheses.

Gilbert JD, Manica A.

Evolution. 2015 May;69(5):1255-70. doi: 10.1111/evo.12656. Epub 2015 Apr 30.

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