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Items: 1 to 50 of 58

1.

Considering adaptive genetic variation in climate change vulnerability assessment reduces species range loss projections.

Razgour O, Forester B, Taggart JB, Bekaert M, Juste J, Ibáñez C, Puechmaille SJ, Novella-Fernandez R, Alberdi A, Manel S.

Proc Natl Acad Sci U S A. 2019 May 21;116(21):10418-10423. doi: 10.1073/pnas.1820663116. Epub 2019 May 6.

2.

Long-Distance Benefits of Marine Reserves: Myth or Reality?

Manel S, Loiseau N, Andrello M, Fietz K, Goñi R, Forcada A, Lenfant P, Kininmonth S, Marcos C, Marques V, Mallol S, Pérez-Ruzafa A, Breusing C, Puebla O, Mouillot D.

Trends Ecol Evol. 2019 Apr;34(4):342-354. doi: 10.1016/j.tree.2019.01.002. Epub 2019 Feb 15. Review.

PMID:
30777295
3.

Partitioning genetic and species diversity refines our understanding of species-genetic diversity relationships.

Pfeiffer VW, Ford BM, Housset J, McCombs A, Blanco-Pastor JL, Gouin N, Manel S, Bertin A.

Ecol Evol. 2018 Dec 11;8(24):12351-12364. doi: 10.1002/ece3.4530. eCollection 2018 Dec.

4.

McSwan: A joint site frequency spectrum method to detect and date selective sweeps across multiple population genomes.

Tournebize R, Poncet V, Jakobsson M, Vigouroux Y, Manel S.

Mol Ecol Resour. 2019 Jan;19(1):283-295. doi: 10.1111/1755-0998.12957. Epub 2018 Nov 22.

PMID:
30358170
5.

Geographic isolation and larval dispersal shape seascape genetic patterns differently according to spatial scale.

Dalongeville A, Andrello M, Mouillot D, Lobreaux S, Fortin MJ, Lasram F, Belmaker J, Rocklin D, Manel S.

Evol Appl. 2018 Jun 5;11(8):1437-1447. doi: 10.1111/eva.12638. eCollection 2018 Sep.

6.

Predicting genotype environmental range from genome-environment associations.

Manel S, Andrello M, Henry K, Verdelet D, Darracq A, Guerin PE, Desprez B, Devaux P.

Mol Ecol. 2018 Jul;27(13):2823-2833. doi: 10.1111/mec.14723. Epub 2018 Jun 6.

PMID:
29772088
7.

Environmental DNA illuminates the dark diversity of sharks.

Boussarie G, Bakker J, Wangensteen OS, Mariani S, Bonnin L, Juhel JB, Kiszka JJ, Kulbicki M, Manel S, Robbins WD, Vigliola L, Mouillot D.

Sci Adv. 2018 May 2;4(5):eaap9661. doi: 10.1126/sciadv.aap9661. eCollection 2018 May.

8.

Soil environment is a key driver of adaptation in Medicago truncatula: new insights from landscape genomics.

Guerrero J, Andrello M, Burgarella C, Manel S.

New Phytol. 2018 Jul;219(1):378-390. doi: 10.1111/nph.15171. Epub 2018 Apr 26.

PMID:
29696659
9.

Combining six genome scan methods to detect candidate genes to salinity in the Mediterranean striped red mullet (Mullus surmuletus).

Dalongeville A, Benestan L, Mouillot D, Lobreaux S, Manel S.

BMC Genomics. 2018 Mar 27;19(1):217. doi: 10.1186/s12864-018-4579-z.

10.

Two disjunct Pleistocene populations and anisotropic postglacial expansion shaped the current genetic structure of the relict plant Amborella trichopoda.

Tournebize R, Manel S, Vigouroux Y, Munoz F, de Kochko A, Poncet V.

PLoS One. 2017 Aug 18;12(8):e0183412. doi: 10.1371/journal.pone.0183412. eCollection 2017.

11.

Persistence of butterfly populations in fragmented habitats along urban density gradients: motility helps.

Rochat E, Manel S, Deschamps-Cottin M, Widmer I, Joost S.

Heredity (Edinb). 2017 Nov;119(5):328-338. doi: 10.1038/hdy.2017.40. Epub 2017 Aug 9.

12.

Global mismatch between fishing dependency and larval supply from marine reserves.

Andrello M, Guilhaumon F, Albouy C, Parravicini V, Scholtens J, Verley P, Barange M, Sumaila UR, Manel S, Mouillot D.

Nat Commun. 2017 Jul 10;8:16039. doi: 10.1038/ncomms16039.

13.

An integrated framework to identify wildlife populations under threat from climate change.

Razgour O, Taggart JB, Manel S, Juste J, Ibáñez C, Rebelo H, Alberdi A, Jones G, Park K.

Mol Ecol Resour. 2018 Jan;18(1):18-31. doi: 10.1111/1755-0998.12694. Epub 2017 Jul 25.

PMID:
28649779
14.

Insights into the genetic relationships among plants of Beta section Beta using SNP markers.

Andrello M, Henry K, Devaux P, Verdelet D, Desprez B, Manel S.

Theor Appl Genet. 2017 Sep;130(9):1857-1866. doi: 10.1007/s00122-017-2929-x. Epub 2017 Jun 6.

PMID:
28589246
15.

Combining Genotype, Phenotype, and Environment to Infer Potential Candidate Genes.

Talbot B, Chen TW, Zimmerman S, Joost S, Eckert AJ, Crow TM, Semizer-Cuming D, Seshadri C, Manel S.

J Hered. 2017 Mar 1;108(2):207-216. doi: 10.1093/jhered/esw077.

PMID:
28003371
16.

Genetic variation of loci potentially under selection confounds species-genetic diversity correlations in a fragmented habitat.

Bertin A, Gouin N, Baumel A, Gianoli E, Serratosa J, Osorio R, Manel S.

Mol Ecol. 2017 Jan;26(2):431-443. doi: 10.1111/mec.13923. Epub 2016 Dec 9.

PMID:
27862542
17.

Towards an integrated ecosystem of R packages for the analysis of population genetic data.

Paradis E, Gosselin T, Grünwald NJ, Jombart T, Manel S, Lapp H.

Mol Ecol Resour. 2017 Jan;17(1):1-4. doi: 10.1111/1755-0998.12636. No abstract available.

PMID:
27860406
18.

Developing educational resources for population genetics in R: an open and collaborative approach.

Kamvar ZN, López-Uribe MM, Coughlan S, Grünwald NJ, Lapp H, Manel S.

Mol Ecol Resour. 2017 Jan;17(1):120-128. doi: 10.1111/1755-0998.12558. Epub 2016 Jul 12.

PMID:
27297607
19.

Genomic resources and their influence on the detection of the signal of positive selection in genome scans.

Manel S, Perrier C, Pratlong M, Abi-Rached L, Paganini J, Pontarotti P, Aurelle D.

Mol Ecol. 2016 Jan;25(1):170-84. doi: 10.1111/mec.13468. Epub 2015 Dec 17. Review.

PMID:
26562485
20.

Taxonomic, spatial and adaptive genetic variation of Beta section Beta.

Andrello M, Henry K, Devaux P, Desprez B, Manel S.

Theor Appl Genet. 2016 Feb;129(2):257-71. doi: 10.1007/s00122-015-2625-7. Epub 2015 Nov 2.

PMID:
26526552
21.

MetaPopGen: an r package to simulate population genetics in large size metapopulations.

Andrello M, Manel S.

Mol Ecol Resour. 2015 Sep;15(5):1153-62. doi: 10.1111/1755-0998.12371. Epub 2015 Jan 27.

PMID:
25585533
22.

Microsatellite primers in Parietaria judaica (Urticaceae) to assess genetic diversity and structure in urban landscapes.

Bossu A, Bertaudière-Montès V, Dubut V, Manel S.

Appl Plant Sci. 2014 Sep 9;2(9). pii: apps.1400036. doi: 10.3732/apps.1400036. eCollection 2014 Sep.

23.

Characterizing the phylogenetic tree community structure of a protected tropical rain forest area in Cameroon.

Manel S, Couvreur TL, Munoz F, Couteron P, Hardy OJ, Sonké B.

PLoS One. 2014 Jun 17;9(6):e98920. doi: 10.1371/journal.pone.0098920. eCollection 2014.

24.

Influence of ethnolinguistic diversity on the sorghum genetic patterns in subsistence farming systems in eastern Kenya.

Labeyrie V, Deu M, Barnaud A, Calatayud C, Buiron M, Wambugu P, Manel S, Glaszmann JC, Leclerc C.

PLoS One. 2014 Mar 17;9(3):e92178. doi: 10.1371/journal.pone.0092178. eCollection 2014.

25.

Reply to Kershaw and Rosenbaum.

Manel S, Holderegger R.

Trends Ecol Evol. 2014 Feb;29(2):70-1. doi: 10.1016/j.tree.2013.12.009. Epub 2014 Jan 13. No abstract available.

PMID:
24433844
26.

Morphological clines and weak drift along an urbanization gradient in the butterfly, Pieris rapae.

Schoville SD, Widmer I, Deschamps-Cottin M, Manel S.

PLoS One. 2013 Dec 27;8(12):e83095. doi: 10.1371/journal.pone.0083095. eCollection 2013.

27.

Integrating landscape genomics and spatially explicit approaches to detect loci under selection in clinal populations.

Jones MR, Forester BR, Teufel AI, Adams RV, Anstett DN, Goodrich BA, Landguth EL, Joost S, Manel S.

Evolution. 2013 Dec;67(12):3455-68. doi: 10.1111/evo.12237. Epub 2013 Sep 4.

PMID:
24299400
28.

Development of an Arabis alpina genomic contig sequence data set and application to single nucleotide polymorphisms discovery.

Lobréaux S, Manel S, Melodelima C.

Mol Ecol Resour. 2014 Mar;14(2):411-8. doi: 10.1111/1755-0998.12189. Epub 2013 Nov 16.

PMID:
24128264
29.

Meeting review. Uncovering the genetic basis of adaptive change: on the intersection of landscape genomics and theoretical population genetics.

Joost S, Vuilleumier S, Jensen JD, Schoville S, Leempoel K, Stucki S, Widmer I, Melodelima C, Rolland J, Manel S.

Mol Ecol. 2013 Jul;22(14):3659-65.

PMID:
24003454
30.

Low connectivity between Mediterranean marine protected areas: a biophysical modeling approach for the dusky grouper Epinephelus marginatus.

Andrello M, Mouillot D, Beuvier J, Albouy C, Thuiller W, Manel S.

PLoS One. 2013 Jul 8;8(7):e68564. doi: 10.1371/journal.pone.0068564. Print 2013.

31.

Ten years of landscape genetics.

Manel S, Holderegger R.

Trends Ecol Evol. 2013 Oct;28(10):614-21. doi: 10.1016/j.tree.2013.05.012. Epub 2013 Jun 13. Review.

PMID:
23769416
32.

Genotype - environment correlations in corals from the Great Barrier Reef.

Lundgren P, Vera JC, Peplow L, Manel S, van Oppen MJ.

BMC Genet. 2013 Feb 22;14:9. doi: 10.1186/1471-2156-14-9.

33.

Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations.

De Mita S, Thuillet AC, Gay L, Ahmadi N, Manel S, Ronfort J, Vigouroux Y.

Mol Ecol. 2013 Mar;22(5):1383-99. doi: 10.1111/mec.12182. Epub 2013 Jan 7.

PMID:
23294205
34.

Genetic diversity in widespread species is not congruent with species richness in alpine plant communities.

Taberlet P, Zimmermann NE, Englisch T, Tribsch A, Holderegger R, Alvarez N, Niklfeld H, Coldea G, Mirek Z, Moilanen A, Ahlmer W, Marsan PA, Bona E, Bovio M, Choler P, Cieślak E, Colli L, Cristea V, Dalmas JP, Frajman B, Garraud L, Gaudeul M, Gielly L, Gutermann W, Jogan N, Kagalo AA, Korbecka G, Küpfer P, Lequette B, Letz DR, Manel S, Mansion G, Marhold K, Martini F, Negrini R, Niño F, Paun O, Pellecchia M, Perico G, Piękoś-Mirkowa H, Prosser F, Puşcaş M, Ronikier M, Scheuerer M, Schneeweiss GM, Schönswetter P, Schratt-Ehrendorfer L, Schüpfer F, Selvaggi A, Steinmann K, Thiel-Egenter C, van Loo M, Winkler M, Wohlgemuth T, Wraber T, Gugerli F; IntraBioDiv Consortium, Vellend M.

Ecol Lett. 2012 Dec;15(12):1439-48. doi: 10.1111/ele.12004. Epub 2012 Sep 25.

35.

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation.

Manel S, Gugerli F, Thuiller W, Alvarez N, Legendre P, Holderegger R, Gielly L, Taberlet P; IntraBioDiv Consortium.

Mol Ecol. 2012 Aug;21(15):3729-38. doi: 10.1111/j.1365-294X.2012.05656.x. Epub 2012 Jun 10.

36.

Sampling in landscape genomics.

Manel S, Albert CH, Yoccoz NG.

Methods Mol Biol. 2012;888:3-12. doi: 10.1007/978-1-61779-870-2_1.

PMID:
22665272
37.

Forecasting changes in population genetic structure of alpine plants in response to global warming.

Jay F, Manel S, Alvarez N, Durand EY, Thuiller W, Holderegger R, Taberlet P, François O.

Mol Ecol. 2012 May;21(10):2354-68. doi: 10.1111/j.1365-294X.2012.05541.x. Epub 2012 Apr 18.

PMID:
22512785
38.

Comparison of Bayesian clustering and edge detection methods for inferring boundaries in landscape genetics.

Safner T, Miller MP, McRae BH, Fortin MJ, Manel S.

Int J Mol Sci. 2011 Jan 25;12(2):865-89. doi: 10.3390/ijms12020865.

39.

Landscape genetics of plants.

Holderegger R, Buehler D, Gugerli F, Manel S.

Trends Plant Sci. 2010 Dec;15(12):675-83. doi: 10.1016/j.tplants.2010.09.002. Review.

PMID:
20940103
40.

Common factors drive adaptive genetic variation at different spatial scales in Arabis alpina.

Manel S, Poncet BN, Legendre P, Gugerli F, Holderegger R.

Mol Ecol. 2010 Sep;19(17):3824-35. doi: 10.1111/j.1365-294X.2010.04716.x. Epub 2010 Aug 13.

PMID:
20723057
41.

Perspectives on the use of landscape genetics to detect genetic adaptive variation in the field.

Manel S, Joost S, Epperson BK, Holderegger R, Storfer A, Rosenberg MS, Scribner KT, Bonin A, Fortin MJ.

Mol Ecol. 2010 Sep;19(17):3760-72. doi: 10.1111/j.1365-294X.2010.04717.x. Epub 2010 Aug 13.

PMID:
20723056
42.

Utility of computer simulations in landscape genetics.

Epperson BK, McRae BH, Scribner K, Cushman SA, Rosenberg MS, Fortin MJ, James PM, Murphy M, Manel S, Legendre P, Dale MR.

Mol Ecol. 2010 Sep;19(17):3549-64. doi: 10.1111/j.1365-294X.2010.04678.x. Epub 2010 Jul 7. Review.

PMID:
20618894
43.

Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates.

Herrmann D, Poncet BN, Manel S, Rioux D, Gielly L, Taberlet P, Gugerli F.

Genome. 2010 Apr;53(4):302-10. doi: 10.1139/g10-006.

PMID:
20616861
44.

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina.

Poncet BN, Herrmann D, Gugerli F, Taberlet P, Holderegger R, Gielly L, Rioux D, Thuiller W, Aubert S, Manel S.

Mol Ecol. 2010 Jul;19(14):2896-907. doi: 10.1111/j.1365-294X.2010.04696.x. Epub 2010 Jul 1.

PMID:
20609082
45.

Genome scan to assess the respective role of host-plant and environmental constraints on the adaptation of a widespread insect.

Manel S, Conord C, Després L.

BMC Evol Biol. 2009 Dec 10;9:288. doi: 10.1186/1471-2148-9-288.

46.

History or ecology? Substrate type as a major driver of spatial genetic structure in Alpine plants.

Alvarez N, Thiel-Egenter C, Tribsch A, Holderegger R, Manel S, Schönswetter P, Taberlet P, Brodbeck S, Gaudeul M, Gielly L, Küpfer P, Mansion G, Negrini R, Paun O, Pellecchia M, Rioux D, Schüpfer F, Van Loo M, Winkler M, Gugerli F; IntraBioDiv Consortium.

Ecol Lett. 2009 Jul;12(7):632-40. doi: 10.1111/j.1461-0248.2009.01312.x. Epub 2009 Apr 22.

PMID:
19392716
47.

Perspectives and challenges in landscape genetics.

Manel S, Segelbacher G.

Mol Ecol. 2009 May;18(9):1821-2. doi: 10.1111/j.1365-294X.2009.04151.x. Epub 2008 Mar 19.

PMID:
19302466
48.

The effect of climate on masting in the European larch and on its specific seed predators.

Poncet BN, Garat P, Manel S, Bru N, Sachet JM, Roques A, Despres L.

Oecologia. 2009 Mar;159(3):527-37. doi: 10.1007/s00442-008-1233-5. Epub 2008 Dec 10.

PMID:
19066970
49.

Temporal and spatial analyses disclose consequences of habitat fragmentation on the genetic diversity in capercaillie (Tetrao urogallus).

Segelbacher G, Manel S, Tomiuk J.

Mol Ecol. 2008 May;17(10):2356-67. doi: 10.1111/j.1365-294X.2008.03767.x. Epub 2008 Apr 17.

PMID:
18422931
50.

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