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Disinfectant and Antimicrobial Susceptibility Profiles of the Big Six Non-O157 Shiga Toxin-Producing Escherichia coli Strains from Food Animals and Humans.

Beier RC, Franz E, Bono JL, Mandrell RE, Fratamico PM, Callaway TR, Andrews K, Poole TL, Crippen TL, Sheffield CL, Anderson RC, Nisbet DJ.

J Food Prot. 2016 Aug;79(8):1355-70. doi: 10.4315/0362-028X.JFP-15-600.


An Environmental Shiga Toxin-Producing Escherichia coli O145 Clonal Population Exhibits High-Level Phenotypic Variation That Includes Virulence Traits.

Carter MQ, Quinones B, He X, Zhong W, Louie JW, Lee BG, Yambao JC, Mandrell RE, Cooley MB.

Appl Environ Microbiol. 2015 Dec 4;82(4):1090-1101. doi: 10.1128/AEM.03172-15. Print 2016 Feb 15.


Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains.

Norman KN, Clawson ML, Strockbine NA, Mandrell RE, Johnson R, Ziebell K, Zhao S, Fratamico PM, Stones R, Allard MW, Bono JL.

Front Cell Infect Microbiol. 2015 Mar 11;5:21. doi: 10.3389/fcimb.2015.00021. eCollection 2015.


High genotypic and phenotypic similarity among Shiga toxin-producing Escherichia coli O111 environmental and outbreak strains.

Diodati ME, Bates AH, Cooley MB, Walker S, Mandrell RE, Brandl MT.

Foodborne Pathog Dis. 2015 Mar;12(3):235-43. doi: 10.1089/fpd.2014.1887. Epub 2015 Feb 6.


Fitness of Outbreak and Environmental Strains of Escherichia coli O157:H7 in Aerosolizable Soil and Association of Clonal Variation in Stress Gene Regulation.

Ravva SV, Cooley MB, Sarreal CZ, Mandrell RE.

Pathogens. 2014 Jun 30;3(3):528-48. doi: 10.3390/pathogens3030528.


Strain differences in fitness of Escherichia coli O157:H7 to resist protozoan predation and survival in soil.

Ravva SV, Sarreal CZ, Mandrell RE.

PLoS One. 2014 Jul 14;9(7):e102412. doi: 10.1371/journal.pone.0102412. eCollection 2014.


Complete Genome Sequences of Two Escherichia coli O145:H28 Outbreak Strains of Food Origin.

Cooper KK, Mandrell RE, Louie JW, Korlach J, Clark TA, Parker CT, Huynh S, Chain PS, Ahmed S, Carter MQ.

Genome Announc. 2014 May 22;2(3). pii: e00482-14. doi: 10.1128/genomeA.00482-14.


Comparison of subtypes of Listeria monocytogenes isolates from naturally contaminated watershed samples with and without a selective secondary enrichment.

Gorski L, Walker S, Liang AS, Nguyen KM, Govoni J, Carychao D, Cooley MB, Mandrell RE.

PLoS One. 2014 Mar 20;9(3):e92467. doi: 10.1371/journal.pone.0092467. eCollection 2014.


Risk factors for Escherichia coli O157 on beef cattle ranches located near a major produce production region.

Benjamin LA, Jay-Russell MT, Atwill ER, Cooley MB, Carychao D, Larsen RE, Mandrell RE.

Epidemiol Infect. 2015 Jan;143(1):81-93. doi: 10.1017/S0950268814000521. Epub 2014 Mar 20.


Prevalence of shiga toxin producing Escherichia coli, Salmonella enterica, and Listeria monocytogenes at public access watershed sites in a California Central Coast agricultural region.

Cooley MB, Quiñones B, Oryang D, Mandrell RE, Gorski L.

Front Cell Infect Microbiol. 2014 Mar 4;4:30. doi: 10.3389/fcimb.2014.00030. eCollection 2014. Erratum in: Front Cell Infect Microbiol. 2014;4:58.


Top-down proteomic identification of Shiga toxin 2 subtypes from Shiga toxin-producing Escherichia coli by matrix-assisted laser desorption ionization-tandem time of flight mass spectrometry.

Fagerquist CK, Zaragoza WJ, Sultan O, Woo N, Quiñones B, Cooley MB, Mandrell RE.

Appl Environ Microbiol. 2014 May;80(9):2928-40. doi: 10.1128/AEM.04058-13. Epub 2014 Feb 28.


Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7.

Cooper KK, Mandrell RE, Louie JW, Korlach J, Clark TA, Parker CT, Huynh S, Chain PS, Ahmed S, Carter MQ.

BMC Genomics. 2014 Jan 10;15:17. doi: 10.1186/1471-2164-15-17.


A polyclonal antibody based immunoassay detects seven subtypes of Shiga toxin 2 produced by Escherichia coli in human and environmental samples.

He X, Patfield S, Hnasko R, Rasooly R, Mandrell RE.

PLoS One. 2013 Oct 16;8(10):e76368. doi: 10.1371/journal.pone.0076368. eCollection 2013.


Quantification and characterization of mucosa-associated and intracellular Escherichia coli in inflammatory bowel disease.

Elliott TR, Hudspith BN, Wu G, Cooley M, Parkes G, Quiñones B, Randall L, Mandrell RE, Fagerquist CK, Brostoff J, Rayment NB, Boussioutas A, Petrovska L, Sanderson JD.

Inflamm Bowel Dis. 2013 Oct;19(11):2326-38. doi: 10.1097/MIB.0b013e3182a38a92.


Development of a robust method for isolation of shiga toxin-positive Escherichia coli (STEC) from fecal, plant, soil and water samples from a leafy greens production region in California.

Cooley MB, Jay-Russell M, Atwill ER, Carychao D, Nguyen K, Quiñones B, Patel R, Walker S, Swimley M, Pierre-Jerome E, Gordus AG, Mandrell RE.

PLoS One. 2013 Jun 6;8(6):e65716. doi: 10.1371/journal.pone.0065716. Print 2013.


Occurrence of generic Escherichia coli, E. coli O157 and Salmonella spp. in water and sediment from leafy green produce farms and streams on the Central California coast.

Benjamin L, Atwill ER, Jay-Russell M, Cooley M, Carychao D, Gorski L, Mandrell RE.

Int J Food Microbiol. 2013 Jul 1;165(1):65-76. doi: 10.1016/j.ijfoodmicro.2013.04.003. Epub 2013 Apr 11.


Diversity of pulsed-field gel electrophoresis pulsotypes, serovars, and antibiotic resistance among Salmonella isolates from wild amphibians and reptiles in the California Central Coast.

Gorski L, Jay-Russell MT, Liang AS, Walker S, Bengson Y, Govoni J, Mandrell RE.

Foodborne Pathog Dis. 2013 Jun;10(6):540-8. doi: 10.1089/fpd.2012.1372. Epub 2013 Apr 11.


Altered protozoan and bacterial communities and survival of Escherichia coli O157:H7 in monensin-treated wastewater from a dairy lagoon.

Ravva SV, Sarreal CZ, Mandrell RE.

PLoS One. 2013;8(1):e54782. doi: 10.1371/journal.pone.0054782. Epub 2013 Jan 22.


Genotypic analyses of shiga toxin-producing Escherichia coli O157 and non-O157 recovered from feces of domestic animals on rural farms in Mexico.

Amézquita-López BA, Quiñones B, Cooley MB, León-Félix J, Castro-del Campo N, Mandrell RE, Jiménez M, Chaidez C.

PLoS One. 2012;7(12):e51565. doi: 10.1371/journal.pone.0051565. Epub 2012 Dec 10.


Using major outer membrane protein typing as an epidemiological tool to investigate outbreaks caused by milk-borne Campylobacter jejuni isolates in California.

Jay-Russell MT, Mandrell RE, Yuan J, Bates A, Manalac R, Mohle-Boetani J, Kimura A, Lidgard J, Miller WG.

J Clin Microbiol. 2013 Jan;51(1):195-201. doi: 10.1128/JCM.01845-12. Epub 2012 Oct 31.


Functional metagenomics of Escherichia coli O157:H7 interactions with spinach indigenous microorganisms during biofilm formation.

Carter MQ, Xue K, Brandl MT, Liu F, Wu L, Louie JW, Mandrell RE, Zhou J.

PLoS One. 2012;7(9):e44186. doi: 10.1371/journal.pone.0044186. Epub 2012 Sep 5.


RcsB contributes to the distinct stress fitness among Escherichia coli O157:H7 curli variants of the 1993 hamburger-associated outbreak strains.

Carter MQ, Parker CT, Louie JW, Huynh S, Fagerquist CK, Mandrell RE.

Appl Environ Microbiol. 2012 Nov;78(21):7706-19. doi: 10.1128/AEM.02157-12. Epub 2012 Aug 24.


O-antigen and virulence profiling of shiga toxin-producing Escherichia coli by a rapid and cost-effective DNA microarray colorimetric method.

Quiñones B, Swimley MS, Narm KE, Patel RN, Cooley MB, Mandrell RE.

Front Cell Infect Microbiol. 2012 May 11;2:61. doi: 10.3389/fcimb.2012.00061. eCollection 2012.


Multilocus sequence typing methods for the emerging Campylobacter Species C. hyointestinalis, C. lanienae, C. sputorum, C. concisus, and C. curvus.

Miller WG, Chapman MH, Yee E, On SL, McNulty DK, Lastovica AJ, Carroll AM, McNamara EB, Duffy G, Mandrell RE.

Front Cell Infect Microbiol. 2012 Apr 2;2:45. doi: 10.3389/fcimb.2012.00045. eCollection 2012.


A single-step purification and molecular characterization of functional Shiga toxin 2 variants from pathogenic Escherichia coli.

He X, Quiñones B, McMahon S, Mandrell RE.

Toxins (Basel). 2012 Jul;4(7):487-504. doi: 10.3390/toxins4070487. Epub 2012 Jun 25.


Isolation of Campylobacter from feral swine (Sus scrofa) on the ranch associated with the 2006 Escherichia coli O157:H7 spinach outbreak investigation in California.

Jay-Russell MT, Bates A, Harden L, Miller WG, Mandrell RE.

Zoonoses Public Health. 2012 Aug;59(5):314-9. doi: 10.1111/j.1863-2378.2012.01465.x. Epub 2012 Mar 8.


Phylogeny of Shiga toxin-producing Escherichia coli O157 isolated from cattle and clinically ill humans.

Bono JL, Smith TP, Keen JE, Harhay GP, McDaneld TG, Mandrell RE, Jung WK, Besser TE, Gerner-Smidt P, Bielaszewska M, Karch H, Clawson ML.

Mol Biol Evol. 2012 Aug;29(8):2047-62. doi: 10.1093/molbev/mss072. Epub 2012 Feb 21.


Escherichia coli serotype O55:H7 diversity supports parallel acquisition of bacteriophage at Shiga toxin phage insertion sites during evolution of the O157:H7 lineage.

Kyle JL, Cummings CA, Parker CT, Quiñones B, Vatta P, Newton E, Huynh S, Swimley M, Degoricija L, Barker M, Fontanoz S, Nguyen K, Patel R, Fang R, Tebbs R, Petrauskene O, Furtado M, Mandrell RE.

J Bacteriol. 2012 Apr;194(8):1885-96. doi: 10.1128/JB.00120-12. Epub 2012 Feb 10.


Bacterial communities in urban aerosols collected with wetted-wall cyclonic samplers and seasonal fluctuations of live and culturable airborne bacteria.

Ravva SV, Hernlem BJ, Sarreal CZ, Mandrell RE.

J Environ Monit. 2012 Feb;14(2):473-81. doi: 10.1039/c1em10753d. Epub 2011 Dec 22.


Evolutionary silence of the acid chaperone protein HdeB in enterohemorrhagic Escherichia coli O157:H7.

Carter MQ, Louie JW, Fagerquist CK, Sultan O, Miller WG, Mandrell RE.

Appl Environ Microbiol. 2012 Feb;78(4):1004-14. doi: 10.1128/AEM.07033-11. Epub 2011 Dec 16.


Distinct transcriptional profiles and phenotypes exhibited by Escherichia coli O157:H7 isolates related to the 2006 spinach-associated outbreak.

Parker CT, Kyle JL, Huynh S, Carter MQ, Brandl MT, Mandrell RE.

Appl Environ Microbiol. 2012 Jan;78(2):455-63. doi: 10.1128/AEM.06251-11. Epub 2011 Nov 11.


The EHEC type III effector NleL is an E3 ubiquitin ligase that modulates pedestal formation.

Piscatelli H, Kotkar SA, McBee ME, Muthupalani S, Schauer DB, Mandrell RE, Leong JM, Zhou D.

PLoS One. 2011 Apr 26;6(4):e19331. doi: 10.1371/journal.pone.0019331.


Distinct acid resistance and survival fitness displayed by Curli variants of enterohemorrhagic Escherichia coli O157:H7.

Carter MQ, Brandl MT, Louie JW, Kyle JL, Carychao DK, Cooley MB, Parker CT, Bates AH, Mandrell RE.

Appl Environ Microbiol. 2011 Jun;77(11):3685-95. doi: 10.1128/AEM.02315-10. Epub 2011 Apr 8.


Sensitive detection of Shiga Toxin 2 and some of its variants in environmental samples by a novel immuno-PCR assay.

He X, Qi W, Quiñones B, McMahon S, Cooley M, Mandrell RE.

Appl Environ Microbiol. 2011 Jun;77(11):3558-64. doi: 10.1128/AEM.02205-10. Epub 2011 Mar 25.


Prevalence, distribution, and diversity of Salmonella enterica in a major produce region of California.

Gorski L, Parker CT, Liang A, Cooley MB, Jay-Russell MT, Gordus AG, Atwill ER, Mandrell RE.

Appl Environ Microbiol. 2011 Apr;77(8):2734-48. doi: 10.1128/AEM.02321-10. Epub 2011 Mar 4.


Bacterial communities in aerosols and manure samples from two different dairies in central and Sonoma valleys of California.

Ravva SV, Sarreal CZ, Mandrell RE.

PLoS One. 2011 Feb 18;6(2):e17281. doi: 10.1371/journal.pone.0017281.


Lipooligosaccharide of Campylobacter jejuni: similarity with multiple types of mammalian glycans beyond gangliosides.

Houliston RS, Vinogradov E, Dzieciatkowska M, Li J, St Michael F, Karwaski MF, Brochu D, Jarrell HC, Parker CT, Yuki N, Mandrell RE, Gilbert M.

J Biol Chem. 2011 Apr 8;286(14):12361-70. doi: 10.1074/jbc.M110.181750. Epub 2011 Jan 21.


Identification of protozoa in dairy lagoon wastewater that consume Escherichia coli O157:H7 preferentially.

Ravva SV, Sarreal CZ, Mandrell RE.

PLoS One. 2010 Dec 20;5(12):e15671. doi: 10.1371/journal.pone.0015671.


Binding of virus-like particles of Norwalk virus to romaine lettuce veins.

Gandhi KM, Mandrell RE, Tian P.

Appl Environ Microbiol. 2010 Dec;76(24):7997-8003. doi: 10.1128/AEM.01566-10. Epub 2010 Oct 29.


Differences in methylation at GATC sites in genomic DNA of Campylobacter coli from turkeys and swine.

Wright S, Wilson S, Miller WG, Mandrell RE, Siletzky RM, Kathariou S.

Appl Environ Microbiol. 2010 Nov;76(21):7314-7. doi: 10.1128/AEM.00934-10. Epub 2010 Sep 10.


Comparison of genotypes of Salmonella enterica serovar Enteritidis phage type 30 and 9c strains isolated during three outbreaks associated with raw almonds.

Parker CT, Huynh S, Quiñones B, Harris LJ, Mandrell RE.

Appl Environ Microbiol. 2010 Jun;76(11):3723-31. doi: 10.1128/AEM.03053-09. Epub 2010 Apr 2.


Rapid identification of protein biomarkers of Escherichia coli O157:H7 by matrix-assisted laser desorption ionization-time-of-flight-time-of-flight mass spectrometry and top-down proteomics.

Fagerquist CK, Garbus BR, Miller WG, Williams KE, Yee E, Bates AH, Boyle S, Harden LA, Cooley MB, Mandrell RE.

Anal Chem. 2010 Apr 1;82(7):2717-25. doi: 10.1021/ac902455d.


Validation of a cell-free translation assay for detecting shiga toxin 2 in bacterial culture.

He X, Quiñones B, Carter JM, Mandrell RE.

J Agric Food Chem. 2009 Jun 10;57(11):5084-8. doi: 10.1021/jf9002285.


Phylogenetic classification of Escherichia coli O157:H7 strains of human and bovine origin using a novel set of nucleotide polymorphisms.

Clawson ML, Keen JE, Smith TP, Durso LM, McDaneld TG, Mandrell RE, Davis MA, Bono JL.

Genome Biol. 2009;10(5):R56. doi: 10.1186/gb-2009-10-5-r56. Epub 2009 May 22.


Autoinducer-2 production in Campylobacter jejuni contributes to chicken colonization.

Quiñones B, Miller WG, Bates AH, Mandrell RE.

Appl Environ Microbiol. 2009 Jan;75(1):281-5. doi: 10.1128/AEM.01803-08. Epub 2008 Nov 14.


Complete chemoenzymatic synthesis of the Forssman antigen using novel glycosyltransferases identified in Campylobacter jejuni and Pasteurella multocida.

Houliston RS, Bernatchez S, Karwaski MF, Mandrell RE, Jarrell HC, Wakarchuk WW, Gilbert M.

Glycobiology. 2009 Feb;19(2):153-9. doi: 10.1093/glycob/cwn117. Epub 2008 Oct 25.


Seasonal tracking of histo-blood group antigen expression and norovirus binding in oyster gastrointestinal cells.

Tian P, Engelbrektson AL, Mandrell RE.

J Food Prot. 2008 Aug;71(8):1696-700.


Characterization of lipooligosaccharide-biosynthetic loci of Campylobacter jejuni reveals new lipooligosaccharide classes: evidence of mosaic organizations.

Parker CT, Gilbert M, Yuki N, Endtz HP, Mandrell RE.

J Bacteriol. 2008 Aug;190(16):5681-9. doi: 10.1128/JB.00254-08. Epub 2008 Jun 13.


Comparative genomic analysis of clinical strains of Campylobacter jejuni from South Africa.

Quiñones B, Guilhabert MR, Miller WG, Mandrell RE, Lastovica AJ, Parker CT.

PLoS One. 2008 Apr 23;3(4):e2015. doi: 10.1371/journal.pone.0002015.

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