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Items: 1 to 50 of 102

1.

Antibiotic resistance genes in treated wastewater and in the receiving water bodies: A pan-European survey of urban settings.

Cacace D, Fatta-Kassinos D, Manaia CM, Cytryn E, Kreuzinger N, Rizzo L, Karaolia P, Schwartz T, Alexander J, Merlin C, Garelick H, Schmitt H, de Vries D, Schwermer CU, Meric S, Ozkal CB, Pons MN, Kneis D, Berendonk TU.

Water Res. 2019 Oct 1;162:320-330. doi: 10.1016/j.watres.2019.06.039. Epub 2019 Jun 24.

2.

Continuous ozonation of urban wastewater: Removal of antibiotics, antibiotic-resistant Escherichia coli and antibiotic resistance genes and phytotoxicity.

Iakovides IC, Michael-Kordatou I, Moreira NFF, Ribeiro AR, Fernandes T, Pereira MFR, Nunes OC, Manaia CM, Silva AMT, Fatta-Kassinos D.

Water Res. 2019 Aug 1;159:333-347. doi: 10.1016/j.watres.2019.05.025. Epub 2019 May 10.

3.

Antibiotic resistance in European wastewater treatment plants mirrors the pattern of clinical antibiotic resistance prevalence.

Pärnänen KMM, Narciso-da-Rocha C, Kneis D, Berendonk TU, Cacace D, Do TT, Elpers C, Fatta-Kassinos D, Henriques I, Jaeger T, Karkman A, Martinez JL, Michael SG, Michael-Kordatou I, O'Sullivan K, Rodriguez-Mozaz S, Schwartz T, Sheng H, Sørum H, Stedtfeld RD, Tiedje JM, Giustina SVD, Walsh F, Vaz-Moreira I, Virta M, Manaia CM.

Sci Adv. 2019 Mar 27;5(3):eaau9124. doi: 10.1126/sciadv.aau9124. eCollection 2019 Mar.

4.

Neighbor urban wastewater treatment plants display distinct profiles of bacterial community and antibiotic resistance genes.

Fernandes T, Vaz-Moreira I, Manaia CM.

Environ Sci Pollut Res Int. 2019 Apr;26(11):11269-11278. doi: 10.1007/s11356-019-04546-y. Epub 2019 Feb 22.

PMID:
30796660
5.

Genetic variation in the conjugative plasmidome of a hospital effluent multidrug resistant Escherichia coli strain.

Ferreira C, Bogas D, Bikarolla SK, Varela AR, Frykholm K, Linheiro R, Nunes OC, Westerlund F, Manaia CM.

Chemosphere. 2019 Apr;220:748-759. doi: 10.1016/j.chemosphere.2018.12.130. Epub 2018 Dec 23.

PMID:
30611073
6.

Assessment of full-scale tertiary wastewater treatment by UV-C based-AOPs: Removal or persistence of antibiotics and antibiotic resistance genes?

Rodríguez-Chueca J, Varella Della Giustina S, Rocha J, Fernandes T, Pablos C, Encinas Á, Barceló D, Rodríguez-Mozaz S, Manaia CM, Marugán J.

Sci Total Environ. 2019 Feb 20;652:1051-1061. doi: 10.1016/j.scitotenv.2018.10.223. Epub 2018 Oct 17.

PMID:
30586792
7.

Performance of secondary wastewater treatment methods for the removal of contaminants of emerging concern implicated in crop uptake and antibiotic resistance spread: A review.

Krzeminski P, Tomei MC, Karaolia P, Langenhoff A, Almeida CMR, Felis E, Gritten F, Andersen HR, Fernandes T, Manaia CM, Rizzo L, Fatta-Kassinos D.

Sci Total Environ. 2019 Jan 15;648:1052-1081. doi: 10.1016/j.scitotenv.2018.08.130. Epub 2018 Aug 11. Review.

PMID:
30340253
8.

A rationale for the high limits of quantification of antibiotic resistance genes in soil.

Fortunato G, Vaz-Moreira I, Becerra-Castro C, Nunes OC, Manaia CM.

Environ Pollut. 2018 Dec;243(Pt B):1696-1703. doi: 10.1016/j.envpol.2018.09.128. Epub 2018 Sep 28.

PMID:
30300875
9.

Association between gentamicin resistance and stress tolerance in water isolates of Ralstonia pickettii and R. mannitolilytica.

Ferro P, Vaz-Moreira I, Manaia CM.

Folia Microbiol (Praha). 2019 Jan;64(1):63-72. doi: 10.1007/s12223-018-0632-1. Epub 2018 Jul 21.

PMID:
30032343
10.

Insights on sulfamethoxazole bio-transformation by environmental Proteobacteria isolates.

Reis PJM, Homem V, Alves A, Vilar VJP, Manaia CM, Nunes OC.

J Hazard Mater. 2018 Sep 15;358:310-318. doi: 10.1016/j.jhazmat.2018.07.012. Epub 2018 Jul 4.

PMID:
29990819
11.

Fate of cefotaxime-resistant Enterobacteriaceae and ESBL-producers over a full-scale wastewater treatment process with UV disinfection.

Silva I, Tacão M, Tavares RDS, Miranda R, Araújo S, Manaia CM, Henriques I.

Sci Total Environ. 2018 Oct 15;639:1028-1037. doi: 10.1016/j.scitotenv.2018.05.229. Epub 2018 May 26.

PMID:
29929272
12.

Bacterial lineages putatively associated with the dissemination of antibiotic resistance genes in a full-scale urban wastewater treatment plant.

Narciso-da-Rocha C, Rocha J, Vaz-Moreira I, Lira F, Tamames J, Henriques I, Martinez JL, Manaia CM.

Environ Int. 2018 Sep;118:179-188. doi: 10.1016/j.envint.2018.05.040. Epub 2018 Jun 5.

PMID:
29883764
13.

Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance.

Larsson DGJ, Andremont A, Bengtsson-Palme J, Brandt KK, de Roda Husman AM, Fagerstedt P, Fick J, Flach CF, Gaze WH, Kuroda M, Kvint K, Laxminarayan R, Manaia CM, Nielsen KM, Plant L, Ploy MC, Segovia C, Simonet P, Smalla K, Snape J, Topp E, van Hengel AJ, Verner-Jeffreys DW, Virta MPJ, Wellington EM, Wernersson AS.

Environ Int. 2018 Aug;117:132-138. doi: 10.1016/j.envint.2018.04.041. Epub 2018 May 7.

14.

Antibiotic resistance in wastewater treatment plants: Tackling the black box.

Manaia CM, Rocha J, Scaccia N, Marano R, Radu E, Biancullo F, Cerqueira F, Fortunato G, Iakovides IC, Zammit I, Kampouris I, Vaz-Moreira I, Nunes OC.

Environ Int. 2018 Jun;115:312-324. doi: 10.1016/j.envint.2018.03.044. Epub 2018 Apr 5. Review.

PMID:
29626693
15.

Solar treatment (H2O2, TiO2-P25 and GO-TiO2 photocatalysis, photo-Fenton) of organic micropollutants, human pathogen indicators, antibiotic resistant bacteria and related genes in urban wastewater.

Moreira NFF, Narciso-da-Rocha C, Polo-López MI, Pastrana-Martínez LM, Faria JL, Manaia CM, Fernández-Ibáñez P, Nunes OC, Silva AMT.

Water Res. 2018 May 15;135:195-206. doi: 10.1016/j.watres.2018.01.064. Epub 2018 Feb 3.

PMID:
29475109
16.

Toward a Comprehensive Strategy to Mitigate Dissemination of Environmental Sources of Antibiotic Resistance.

Vikesland PJ, Pruden A, Alvarez PJJ, Aga D, Bürgmann H, Li XD, Manaia CM, Nambi I, Wigginton K, Zhang T, Zhu YG.

Environ Sci Technol. 2017 Nov 21;51(22):13061-13069. doi: 10.1021/acs.est.7b03623. Epub 2017 Oct 30.

PMID:
28976743
17.

Oryzisolibacter propanilivorax gen. nov., sp. nov., a propanil-degrading bacterium.

Vaz-Moreira I, Narciso-da-Rocha C, Lopes AR, Carvalho G, Lobo-da-Cunha A, Whitman WB, Snauwaert C, Vandamme P, Manaia CM, Nunes OC.

Int J Syst Evol Microbiol. 2017 Oct;67(10):3752-3758. doi: 10.1099/ijsem.0.002184. Epub 2017 Sep 12.

PMID:
28895512
18.

The potential implications of reclaimed wastewater reuse for irrigation on the agricultural environment: The knowns and unknowns of the fate of antibiotics and antibiotic resistant bacteria and resistance genes - A review.

Christou A, Agüera A, Bayona JM, Cytryn E, Fotopoulos V, Lambropoulou D, Manaia CM, Michael C, Revitt M, Schröder P, Fatta-Kassinos D.

Water Res. 2017 Oct 15;123:448-467. doi: 10.1016/j.watres.2017.07.004. Epub 2017 Jul 3. Review.

PMID:
28689129
19.

Applications of optical DNA mapping in microbiology.

Bogas D, Nyberg L, Pacheco R, Azevedo NF, Beech JP, Gomila M, Lalucat J, Manaia CM, Nunes OC, Tegenfeldt JO, Westerlund F.

Biotechniques. 2017 Jun 1;62(6):255-267. doi: 10.2144/000114555.

20.

Ubiquitous and persistent Proteobacteria and other Gram-negative bacteria in drinking water.

Vaz-Moreira I, Nunes OC, Manaia CM.

Sci Total Environ. 2017 May 15;586:1141-1149. doi: 10.1016/j.scitotenv.2017.02.104. Epub 2017 Feb 21.

PMID:
28238372
21.

Characterization of bacterial communities from Masseiras, a unique Portuguese greenhouse agricultural system.

Becerra-Castro C, Lopes AR, Teixeira S, Silva ME, Pimenta E, Manaia CM, Nunes OC.

Antonie Van Leeuwenhoek. 2017 May;110(5):665-676. doi: 10.1007/s10482-017-0833-7. Epub 2017 Feb 2.

PMID:
28150057
22.

Assessing the Risk of Antibiotic Resistance Transmission from the Environment to Humans: Non-Direct Proportionality between Abundance and Risk.

Manaia CM.

Trends Microbiol. 2017 Mar;25(3):173-181. doi: 10.1016/j.tim.2016.11.014. Epub 2016 Dec 21. Review.

PMID:
28012687
23.

Molecular evidence of the close relatedness of clinical, gull and wastewater isolates of quinolone-resistant Escherichia coli.

Varela AR, Manageiro V, Ferreira E, Guimarães MA, da Costa PM, Caniça M, Manaia CM.

J Glob Antimicrob Resist. 2015 Dec;3(4):286-289. doi: 10.1016/j.jgar.2015.07.008. Epub 2015 Sep 7.

PMID:
27842875
24.

Draft Genome Sequences of Two Ralstonia pickettii Strains with Different Aminoglycoside Resistance Phenotypes.

Vaz-Moreira I, Tamames J, Martínez JL, Manaia CM.

Genome Announc. 2016 Nov 10;4(6). pii: e01257-16. doi: 10.1128/genomeA.01257-16.

25.

High Throughput Analysis of Integron Gene Cassettes in Wastewater Environments.

Gatica J, Tripathi V, Green S, Manaia CM, Berendonk T, Cacace D, Merlin C, Kreuzinger N, Schwartz T, Fatta-Kassinos D, Rizzo L, Schwermer CU, Garelick H, Jurkevitch E, Cytryn E.

Environ Sci Technol. 2016 Nov 1;50(21):11825-11836. Epub 2016 Oct 13.

PMID:
27689892
26.

The influence of the autochthonous wastewater microbiota and gene host on the fate of invasive antibiotic resistance genes.

Narciso-da-Rocha C, Manaia CM.

Sci Total Environ. 2017 Jan 1;575:932-940. doi: 10.1016/j.scitotenv.2016.09.157. Epub 2016 Sep 30.

PMID:
27697350
27.

Proteobacteria become predominant during regrowth after water disinfection.

Becerra-Castro C, Macedo G, Silva AMT, Manaia CM, Nunes OC.

Sci Total Environ. 2016 Dec 15;573:313-323. doi: 10.1016/j.scitotenv.2016.08.054. Epub 2016 Aug 26.

PMID:
27570199
28.

Multidrug resistance phenotypes are widespread over different bacterial taxonomic groups thriving in surface water.

Narciso-da-Rocha C, Manaia CM.

Sci Total Environ. 2016 Sep 1;563-564:1-9. doi: 10.1016/j.scitotenv.2016.04.062. Epub 2016 Apr 29.

PMID:
27131885
29.

Ozonation and UV254nm radiation for the removal of microorganisms and antibiotic resistance genes from urban wastewater.

Sousa JM, Macedo G, Pedrosa M, Becerra-Castro C, Castro-Silva S, Pereira MFR, Silva AMT, Nunes OC, Manaia CM.

J Hazard Mater. 2017 Feb 5;323(Pt A):434-441. doi: 10.1016/j.jhazmat.2016.03.096. Epub 2016 Apr 1.

PMID:
27072309
30.

Photocatalytic ozonation of urban wastewater and surface water using immobilized TiO2 with LEDs: Micropollutants, antibiotic resistance genes and estrogenic activity.

Moreira NFF, Sousa JM, Macedo G, Ribeiro AR, Barreiros L, Pedrosa M, Faria JL, Pereira MFR, Castro-Silva S, Segundo MA, Manaia CM, Nunes OC, Silva AMT.

Water Res. 2016 May 1;94:10-22. doi: 10.1016/j.watres.2016.02.003. Epub 2016 Feb 8.

PMID:
26921709
31.

Antibiotic resistance in urban aquatic environments: can it be controlled?

Manaia CM, Macedo G, Fatta-Kassinos D, Nunes OC.

Appl Microbiol Biotechnol. 2016 Feb;100(4):1543-57. doi: 10.1007/s00253-015-7202-0. Epub 2015 Dec 9. Review.

PMID:
26649735
32.

Quinolone resistant Aeromonas spp. as carriers and potential tracers of acquired antibiotic resistance in hospital and municipal wastewater.

Varela AR, Nunes OC, Manaia CM.

Sci Total Environ. 2016 Jan 15;542(Pt A):665-71. doi: 10.1016/j.scitotenv.2015.10.124. Epub 2015 Nov 4.

PMID:
26546762
33.

Multidrug Resistance in Quinolone-Resistant Gram-Negative Bacteria Isolated from Hospital Effluent and the Municipal Wastewater Treatment Plant.

Vaz-Moreira I, Varela AR, Pereira TV, Fochat RC, Manaia CM.

Microb Drug Resist. 2016 Mar;22(2):155-63. doi: 10.1089/mdr.2015.0118. Epub 2015 Oct 15.

PMID:
26469134
34.

Hydromonas duriensis gen. nov., sp. nov., isolated from freshwater.

Vaz-Moreira I, Narciso-da-Rocha C, De Brandt E, Vandamme P, Silva Ferreira AC, Lobo-da-Cunha A, Nunes OC, Manaia CM.

Int J Syst Evol Microbiol. 2015 Nov;65(11):4134-4139. doi: 10.1099/ijsem.0.000546. Epub 2015 Aug 21.

PMID:
26303147
35.

Bordetella bronchialis sp. nov., Bordetella flabilis sp. nov. and Bordetella sputigena sp. nov., isolated from human respiratory specimens, and reclassification of Achromobacter sediminum Zhang et al. 2014 as Verticia sediminum gen. nov., comb. nov.

Vandamme PA, Peeters C, Cnockaert M, Inganäs E, Falsen E, Moore ER, Nunes OC, Manaia CM, Spilker T, LiPuma JJ.

Int J Syst Evol Microbiol. 2015 Oct;65(10):3674-82. doi: 10.1099/ijsem.0.000473.

PMID:
26220296
36.

Assessment of copper and zinc salts as selectors of antibiotic resistance in Gram-negative bacteria.

Becerra-Castro C, Machado RA, Vaz-Moreira I, Manaia CM.

Sci Total Environ. 2015 Oct 15;530-531:367-372. doi: 10.1016/j.scitotenv.2015.05.102. Epub 2015 Jun 5.

PMID:
26057541
37.

Molecular characterization of quinolone resistance mechanisms and extended-spectrum β-lactamase production in Escherichia coli isolated from dogs.

Meireles D, Leite-Martins L, Bessa LJ, Cunha S, Fernandes R, de Matos A, Manaia CM, Martins da Costa P.

Comp Immunol Microbiol Infect Dis. 2015 Aug;41:43-8. doi: 10.1016/j.cimid.2015.04.004. Epub 2015 May 12.

PMID:
25999092
38.

Relationships among bulk soil physicochemical, biochemical, and microbiological parameters in an organic alfalfa-rice rotation system.

Lopes AR, Bello D, Prieto-Fernández Á, Trasar-Cepeda C, Manaia CM, Nunes OC.

Environ Sci Pollut Res Int. 2015 Aug;22(15):11690-9. doi: 10.1007/s11356-015-4410-1. Epub 2015 Apr 9.

PMID:
25850741
39.

Tackling antibiotic resistance: the environmental framework.

Berendonk TU, Manaia CM, Merlin C, Fatta-Kassinos D, Cytryn E, Walsh F, Bürgmann H, Sørum H, Norström M, Pons MN, Kreuzinger N, Huovinen P, Stefani S, Schwartz T, Kisand V, Baquero F, Martinez JL.

Nat Rev Microbiol. 2015 May;13(5):310-7. doi: 10.1038/nrmicro3439. Epub 2015 Mar 30. Review.

PMID:
25817583
40.

Genetic characterization of fluoroquinolone resistant Escherichia coli from urban streams and municipal and hospital effluents.

Varela AR, Macedo GN, Nunes OC, Manaia CM.

FEMS Microbiol Ecol. 2015 May;91(5). pii: fiv015. doi: 10.1093/femsec/fiv015. Epub 2015 Feb 11.

PMID:
25764463
41.

Wastewater reuse in irrigation: a microbiological perspective on implications in soil fertility and human and environmental health.

Becerra-Castro C, Lopes AR, Vaz-Moreira I, Silva EF, Manaia CM, Nunes OC.

Environ Int. 2015 Feb;75:117-35. doi: 10.1016/j.envint.2014.11.001. Epub 2014 Nov 20. Review.

PMID:
25461421
42.

blaTEM and vanA as indicator genes of antibiotic resistance contamination in a hospital-urban wastewater treatment plant system.

Narciso-da-Rocha C, Varela AR, Schwartz T, Nunes OC, Manaia CM.

J Glob Antimicrob Resist. 2014 Dec;2(4):309-315. doi: 10.1016/j.jgar.2014.10.001. Epub 2014 Oct 30.

PMID:
27873693
43.

Bombella intestini gen. nov., sp. nov., an acetic acid bacterium isolated from bumble bee crop.

Li L, Praet J, Borremans W, Nunes OC, Manaia CM, Cleenwerck I, Meeus I, Smagghe G, De Vuyst L, Vandamme P.

Int J Syst Evol Microbiol. 2015 Jan;65(Pt 1):267-73. doi: 10.1099/ijs.0.068049-0. Epub 2014 Oct 21.

PMID:
25336723
44.

Biodegradation of sulfamethoxazole and other sulfonamides by Achromobacter denitrificans PR1.

Reis PJ, Reis AC, Ricken B, Kolvenbach BA, Manaia CM, Corvini PF, Nunes OC.

J Hazard Mater. 2014 Sep 15;280:741-9. doi: 10.1016/j.jhazmat.2014.08.039. Epub 2014 Sep 1.

PMID:
25238191
45.

Acetobacter sicerae sp. nov., isolated from cider and kefir, and identification of species of the genus Acetobacter by dnaK, groEL and rpoB sequence analysis.

Li L, Wieme A, Spitaels F, Balzarini T, Nunes OC, Manaia CM, Van Landschoot A, De Vuyst L, Cleenwerck I, Vandamme P.

Int J Syst Evol Microbiol. 2014 Jul;64(Pt 7):2407-15. doi: 10.1099/ijs.0.058354-0. Epub 2014 Apr 24.

PMID:
24763601
46.

Insights into the relationship between antimicrobial residues and bacterial populations in a hospital-urban wastewater treatment plant system.

Varela AR, André S, Nunes OC, Manaia CM.

Water Res. 2014 May 1;54:327-36. doi: 10.1016/j.watres.2014.02.003. Epub 2014 Feb 11.

PMID:
24583524
47.

Bacterial diversity and antibiotic resistance in water habitats: searching the links with the human microbiome.

Vaz-Moreira I, Nunes OC, Manaia CM.

FEMS Microbiol Rev. 2014 Jul;38(4):761-78. doi: 10.1111/1574-6976.12062. Epub 2014 Feb 17. Review.

48.

GES-5 among the β-lactamases detected in ubiquitous bacteria isolated from aquatic environment samples.

Manageiro V, Ferreira E, Caniça M, Manaia CM.

FEMS Microbiol Lett. 2014 Feb;351(1):64-69. doi: 10.1111/1574-6968.12340. Epub 2013 Dec 11.

49.

Bacterial community variations in an alfalfa-rice rotation system revealed by 16S rRNA gene 454-pyrosequencing.

Lopes AR, Manaia CM, Nunes OC.

FEMS Microbiol Ecol. 2014 Mar;87(3):650-63. doi: 10.1111/1574-6941.12253. Epub 2013 Dec 3.

50.

Microbial degradation of the herbicide molinate by defined cultures and in the environment.

Nunes OC, Lopes AR, Manaia CM.

Appl Microbiol Biotechnol. 2013 Dec;97(24):10275-91. doi: 10.1007/s00253-013-5316-9. Epub 2013 Nov 6. Review.

PMID:
24193246

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