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Items: 1 to 50 of 181

1.

Publisher Correction: OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data.

Röst HL, Rosenberger G, Navarro P, Gillet L, Miladinović SM, Schubert OT, Wolski W, Collins BC, Malmström J, Malmström L, Aebersold R.

Nat Biotechnol. 2020 Mar;38(3):374. doi: 10.1038/s41587-020-0457-8.

PMID:
32094660
2.

Structural proteomics, electron cryo-microscopy and structural modeling approaches in bacteria-human protein interactions.

Chowdhury S, Happonen L, Khakzad H, Malmström L, Malmström J.

Med Microbiol Immunol. 2020 Feb 19. doi: 10.1007/s00430-020-00663-5. [Epub ahead of print] Review.

PMID:
32072248
3.

Polysaccharide Structures in the Outer Mucilage of Arabidopsis Seeds Visualized by AFM.

Williams MAK, Cornuault V, Irani AH, Symonds VV, Malmström J, An Y, Sims IM, Carnachan SM, Sallé C, North HM.

Biomacromolecules. 2020 Mar 4. doi: 10.1021/acs.biomac.9b01756. [Epub ahead of print]

PMID:
32058700
4.

Polystyrene-block-polyethylene oxide thin films: In vitro cytocompatibility and protein adsorption testing.

Monteiro A I, Kollmetz T, Musson DS, McGlashan SR, Malmström J.

Biointerphases. 2020 Jan 31;15(1):011003. doi: 10.1116/1.5135062.

PMID:
32005056
5.

Interaction with the host: the role of fibronectin and extracellular matrix proteins in the adhesion of Gram-negative bacteria.

Vaca DJ, Thibau A, Schütz M, Kraiczy P, Happonen L, Malmström J, Kempf VAJ.

Med Microbiol Immunol. 2019 Nov 29. doi: 10.1007/s00430-019-00644-3. [Epub ahead of print] Review.

PMID:
31784893
6.

Author Correction: Cytotoxic unsaturated electrophilic compounds commonly target the ubiquitin proteasome system.

Selvaraju K, Mofers A, Pellegrini P, Salomonsson J, Ahlner A, Morad V, Hillert EK, Espinosa B, Arnér ESJ, Jensen L, Malmström J, Turkina MV, D'Arcy P, Walters MA, Sunnerhagen M, Linder S.

Sci Rep. 2019 Nov 20;9(1):17501. doi: 10.1038/s41598-019-53667-4.

7.

Atomic Force Microscopy of Proteins.

An Y, Manuguri SS, Malmström J.

Methods Mol Biol. 2020;2073:247-285. doi: 10.1007/978-1-4939-9869-2_14.

PMID:
31612446
8.

Matrisome Properties of Scaffolds Direct Fibroblasts in Idiopathic Pulmonary Fibrosis.

Elowsson Rendin L, Löfdahl A, Åhrman E, Müller C, Notermans T, Michaliková B, Rosmark O, Zhou XH, Dellgren G, Silverborn M, Bjermer L, Malmström A, Larsson-Callerfelt AK, Isaksson H, Malmström J, Westergren-Thorsson G.

Int J Mol Sci. 2019 Aug 17;20(16). pii: E4013. doi: 10.3390/ijms20164013.

9.

Cytotoxic unsaturated electrophilic compounds commonly target the ubiquitin proteasome system.

Selvaraju K, Mofers A, Pellegrini P, Salomonsson J, Ahlner A, Morad V, Hillert EK, Espinosa B, Arnér ESJ, Jensen L, Malmström J, Turkina MV, D'Arcy P, Walters MA, Sunnerhagen M, Linder S.

Sci Rep. 2019 Jul 8;9(1):9841. doi: 10.1038/s41598-019-46168-x. Erratum in: Sci Rep. 2019 Nov 20;9(1):17501.

10.

Identification of two abundant Aerococcus urinae cell wall-anchored proteins.

Senneby E, Sunnerhagen T, Hallström B, Lood R, Malmström J, Karlsson C, Rasmussen M.

Int J Med Microbiol. 2019 Nov;309(7):151325. doi: 10.1016/j.ijmm.2019.06.005. Epub 2019 Jun 24.

PMID:
31257068
11.

A quantitative Streptococcus pyogenes-human protein-protein interaction map reveals localization of opsonizing antibodies.

Happonen L, Hauri S, Svensson Birkedal G, Karlsson C, de Neergaard T, Khakzad H, Nordenfelt P, Wikström M, Wisniewska M, Björck L, Malmström L, Malmström J.

Nat Commun. 2019 Jun 21;10(1):2727. doi: 10.1038/s41467-019-10583-5.

12.

Streptococcus pyogenes evades adaptive immunity through specific IgG glycan hydrolysis.

Naegeli A, Bratanis E, Karlsson C, Shannon O, Kalluru R, Linder A, Malmström J, Collin M.

J Exp Med. 2019 Jul 1;216(7):1615-1629. doi: 10.1084/jem.20190293. Epub 2019 May 15.

13.

Higher-Order Structure Characterization of Pharmaceutical Proteins by 2D Nuclear Magnetic Resonance Methyl Fingerprinting.

Haxholm GW, Petersen BO, Malmstrøm J.

J Pharm Sci. 2019 Sep;108(9):3029-3035. doi: 10.1016/j.xphs.2019.04.032. Epub 2019 May 10.

PMID:
31082403
14.

Greedy de novo motif discovery to construct motif repositories for bacterial proteomes.

Khakzad H, Malmström J, Malmström L.

BMC Bioinformatics. 2019 Apr 18;20(Suppl 4):141. doi: 10.1186/s12859-019-2686-8.

15.

Neutrophil extracellular traps in the central nervous system hinder bacterial clearance during pneumococcal meningitis.

Mohanty T, Fisher J, Bakochi A, Neumann A, Cardoso JFP, Karlsson CAQ, Pavan C, Lundgaard I, Nilson B, Reinstrup P, Bonnevier J, Cederberg D, Malmström J, Bentzer P, Linder A.

Nat Commun. 2019 Apr 10;10(1):1667. doi: 10.1038/s41467-019-09040-0.

16.

Rapid determination of quaternary protein structures in complex biological samples.

Hauri S, Khakzad H, Happonen L, Teleman J, Malmström J, Malmström L.

Nat Commun. 2019 Jan 14;10(1):192. doi: 10.1038/s41467-018-07986-1.

17.

Complement Activation Occurs at the Surface of Platelets Activated by Streptococcal M1 Protein and This Results in Phagocytosis of Platelets.

Palm F, Sjöholm K, Malmström J, Shannon O.

J Immunol. 2019 Jan 15;202(2):503-513. doi: 10.4049/jimmunol.1800897. Epub 2018 Dec 12.

18.

Data on preparation and characterization of an insect odorant receptor based biosensor.

Khadka R, Aydemir N, Carraher C, Hamiaux C, Colbert D, Cheema J, Malmström J, Kralicek A, Travas-Sejdic J.

Data Brief. 2018 Nov 7;21:2142-2148. doi: 10.1016/j.dib.2018.11.018. eCollection 2018 Dec.

19.

Mandible reconstruction with patient-specific implants: Case report of five consecutive patients.

Öhman D, Schaefer C, Nannmark U, Kjeller G, Malmström J.

Int J Oral Maxillofac Implants. 2019 January/February;34(1):e7–e11. doi: 10.11607/jomi.6913. Epub 2018 Dec 5.

PMID:
30521658
20.

The Human Salivary Antimicrobial Peptide Profile according to the Oral Microbiota in Health, Periodontitis and Smoking.

Grant M, Kilsgård O, Åkerman S, Klinge B, Demmer RT, Malmström J, Jönsson D.

J Innate Immun. 2019;11(5):432-444. doi: 10.1159/000494146. Epub 2018 Nov 28.

21.

Quantification of Silicone Oil and Its Degradation Products in Aqueous Pharmaceutical Formulations by 1H-NMR Spectroscopy.

Malmstrøm J.

J Pharm Sci. 2019 Apr;108(4):1512-1520. doi: 10.1016/j.xphs.2018.11.030. Epub 2018 Nov 22.

PMID:
30471289
22.

An ultrasensitive electrochemical impedance-based biosensor using insect odorant receptors to detect odorants.

Khadka R, Aydemir N, Carraher C, Hamiaux C, Colbert D, Cheema J, Malmström J, Kralicek A, Travas-Sejdic J.

Biosens Bioelectron. 2019 Feb 1;126:207-213. doi: 10.1016/j.bios.2018.10.043. Epub 2018 Oct 23.

PMID:
30415156
23.

Engineered systems to study the synergistic signaling between integrin-mediated mechanotransduction and growth factors (Review).

Monteiro A I, Kollmetz T, Malmström J.

Biointerphases. 2018 Sep 24;13(6):06D302. doi: 10.1116/1.5045231. Review.

PMID:
30249098
24.

Assembly of Protein Stacks With in Situ Synthesized Nanoparticle Cargo.

Manuguri S, Webster K, Yewdall NA, An Y, Venugopal H, Bhugra V, Turner A, Domigan LJ, Gerrard JA, Williams DE, Malmström J.

Nano Lett. 2018 Aug 8;18(8):5138-5145. doi: 10.1021/acs.nanolett.8b02055. Epub 2018 Jul 31.

PMID:
30047268
25.

Quantifying extracellular matrix turnover in human lung scaffold cultures.

Rosmark O, Åhrman E, Müller C, Elowsson Rendin L, Eriksson L, Malmström A, Hallgren O, Larsson-Callerfelt AK, Westergren-Thorsson G, Malmström J.

Sci Rep. 2018 Apr 3;8(1):5409. doi: 10.1038/s41598-018-23702-x.

26.

Atomic Force Microscopy and Angular-Dependent X-ray Photoelectron Spectroscopy Studies of Anchored Quaternary Ammonium Salt Biocides on Quartz Surfaces.

Mathew RT, Cooney RP, Malmstrom J, Doyle CS.

Langmuir. 2018 Apr 24;34(16):4750-4761. doi: 10.1021/acs.langmuir.8b00535. Epub 2018 Apr 11.

PMID:
29597350
27.

Streptococcus pyogenes Infection and the Human Proteome with a Special Focus on the Immunoglobulin G-cleaving Enzyme IdeS.

Karlsson CAQ, Järnum S, Winstedt L, Kjellman C, Björck L, Linder A, Malmström JA.

Mol Cell Proteomics. 2018 Jun;17(6):1097-1111. doi: 10.1074/mcp.RA117.000525. Epub 2018 Mar 6.

28.

Quantitative proteomic characterization of the lung extracellular matrix in chronic obstructive pulmonary disease and idiopathic pulmonary fibrosis.

Åhrman E, Hallgren O, Malmström L, Hedström U, Malmström A, Bjermer L, Zhou XH, Westergren-Thorsson G, Malmström J.

J Proteomics. 2018 Oct 30;189:23-33. doi: 10.1016/j.jprot.2018.02.027. Epub 2018 Mar 1.

PMID:
29501846
29.

Comprehensive Proteomic Characterization of Ontogenic Changes in Hematopoietic Stem and Progenitor Cells.

Jassinskaja M, Johansson E, Kristiansen TA, Åkerstrand H, Sjöholm K, Hauri S, Malmström J, Yuan J, Hansson J.

Cell Rep. 2017 Dec 12;21(11):3285-3297. doi: 10.1016/j.celrep.2017.11.070.

30.

Comprehensive Mass Spectrometric Survey of Streptococcus pyogenes Subcellular Proteomes.

Wilk L, Happonen L, Malmström J, Herwald H.

J Proteome Res. 2018 Jan 5;17(1):600-617. doi: 10.1021/acs.jproteome.7b00701. Epub 2017 Dec 4.

PMID:
29160079
31.

Formation of supramolecular protein structures on gold surfaces.

Domigan LJ, Ashmead H, Dimartino S, Malmstrom J, Grant Pearce F, Blunt M, Williams DE, Gerrard JA.

Biointerphases. 2017 Nov 15;12(4):04E405. doi: 10.1116/1.4986053.

PMID:
29141412
32.

Conducting electrospun fibres with polyanionic grafts as highly selective, label-free, electrochemical biosensor with a low detection limit for non-Hodgkin lymphoma gene.

Kerr-Phillips TE, Aydemir N, Chan EWC, Barker D, Malmström J, Plesse C, Travas-Sejdic J.

Biosens Bioelectron. 2018 Feb 15;100:549-555. doi: 10.1016/j.bios.2017.09.042. Epub 2017 Sep 28.

PMID:
29017070
33.

Leucocyte recruitment and molecular fortification of keratinocytes triggered by streptococcal M1 protein.

Persson ST, Hauri S, Malmström J, Herwald H.

Cell Microbiol. 2018 Jan;20(1). doi: 10.1111/cmi.12792. Epub 2017 Oct 19.

PMID:
28973822
34.

The TLR2 Antagonist Staphylococcal Superantigen-Like Protein 3 Acts as a Virulence Factor to Promote Bacterial Pathogenicity in vivo.

Koymans KJ, Goldmann O, Karlsson CAQ, Sital W, Thänert R, Bisschop A, Vrieling M, Malmström J, van Kessel KPM, de Haas CJC, van Strijp JAG, Medina E.

J Innate Immun. 2017;9(6):561-573. doi: 10.1159/000479100. Epub 2017 Sep 1.

35.

Quantitative proteomic characterization of lung-MSC and bone marrow-MSC using DIA-mass spectrometry.

Rolandsson Enes S, Åhrman E, Palani A, Hallgren O, Bjermer L, Malmström A, Scheding S, Malmström J, Westergren-Thorsson G.

Sci Rep. 2017 Aug 24;7(1):9316. doi: 10.1038/s41598-017-09127-y.

36.

Improvements in Mass Spectrometry Assay Library Generation for Targeted Proteomics.

Teleman J, Hauri S, Malmström J.

J Proteome Res. 2017 Jul 7;16(7):2384-2392. doi: 10.1021/acs.jproteome.6b00928. Epub 2017 Jun 6.

PMID:
28516777
37.

Amyloid Fibrils from Hemoglobin.

Jayawardena N, Kaur M, Nair S, Malmstrom J, Goldstone D, Negron L, Gerrard JA, Domigan LJ.

Biomolecules. 2017 Apr 11;7(2). pii: E37. doi: 10.3390/biom7020037.

38.

Development of Large-scale Cross-linking Mass Spectrometry.

Barysz HM, Malmström J.

Mol Cell Proteomics. 2018 Jun;17(6):1055-1066. doi: 10.1074/mcp.R116.061663. Epub 2017 Apr 7.

39.

Targeted Proteomics and Absolute Protein Quantification for the Construction of a Stoichiometric Host-Pathogen Surface Density Model.

Sjöholm K, Kilsgård O, Teleman J, Happonen L, Malmström L, Malmström J.

Mol Cell Proteomics. 2017 Apr;16(4 suppl 1):S29-S41. doi: 10.1074/mcp.M116.063966. Epub 2017 Feb 9.

40.

Analysis of Bacterial Surface Interactions with Mass Spectrometry-Based Proteomics.

Karlsson C, Teleman J, Malmström J.

Methods Mol Biol. 2017;1535:17-24.

PMID:
27914070
41.

Differential compartmentalization of Streptococcus pyogenes virulence factors and host protein binding properties as a mechanism for host adaptation.

Kilsgård O, Karlsson C, Malmström E, Malmström J.

Int J Med Microbiol. 2016 Nov;306(7):504-516. doi: 10.1016/j.ijmm.2016.06.007. Epub 2016 Jun 29.

PMID:
27423808
42.

Quantitative Mass Spectrometry To Study Inflammatory Cartilage Degradation and Resulting Interactions with the Complement System.

Melin Fürst C, Åhrman E, Bratteby K, Waldemarson S, Malmström J, Blom AM.

J Immunol. 2016 Oct 15;197(8):3415-3424. Epub 2016 Sep 14.

43.

Saliva-Induced Clotting Captures Streptococci: Novel Roles for Coagulation and Fibrinolysis in Host Defense and Immune Evasion.

Wollein Waldetoft K, Mohanty T, Karlsson C, Mörgelin M, Frick IM, Malmström J, Björck L.

Infect Immun. 2016 Sep 19;84(10):2813-23. doi: 10.1128/IAI.00307-16. Print 2016 Oct.

44.

Guided bone regeneration using individualized ceramic sheets.

Malmström J, Anderud J, Abrahamsson P, Wälivaara DÅ, Isaksson SG, Adolfsson E.

Int J Oral Maxillofac Surg. 2016 Oct;45(10):1246-52. doi: 10.1016/j.ijom.2016.06.005. Epub 2016 Jun 27.

PMID:
27364369
45.

Dinosaur: A Refined Open-Source Peptide MS Feature Detector.

Teleman J, Chawade A, Sandin M, Levander F, Malmström J.

J Proteome Res. 2016 Jul 1;15(7):2143-51. doi: 10.1021/acs.jproteome.6b00016. Epub 2016 Jun 8.

46.

Cancer associated proteins in blood plasma: Determining normal variation.

Stenemo M, Teleman J, Sjöström M, Grubb G, Malmström E, Malmström J, Niméus E.

Proteomics. 2016 Jul;16(13):1928-37. doi: 10.1002/pmic.201500204. Epub 2016 Jun 2.

PMID:
27121749
47.

Gold-sputtered Blu-ray discs: simple and inexpensive SERS substrates for sensitive detection of melamine.

Nieuwoudt MK, Martin JW, Oosterbeek RN, Novikova NI, Wang X, Malmström J, Williams DE, Simpson MC.

Anal Bioanal Chem. 2016 Jun;408(16):4403-11. doi: 10.1007/s00216-016-9545-5. Epub 2016 Apr 16.

PMID:
27086022
48.

Conducting polymer based electrochemical biosensors.

Aydemir N, Malmström J, Travas-Sejdic J.

Phys Chem Chem Phys. 2016 Mar 28;18(12):8264-77. doi: 10.1039/c5cp06830d.

PMID:
26948182
49.

Structure and Interactions of a Dimeric Variant of sHIP, a Novel Virulence Determinant of Streptococcus pyogenes.

Diehl C, Wisniewska M, Frick IM, Streicher W, Björck L, Malmström J, Wikström M.

Front Microbiol. 2016 Feb 5;7:95. doi: 10.3389/fmicb.2016.00095. eCollection 2016.

50.

Graft Copolymers with Conducting Polymer Backbones: A Versatile Route to Functional Materials.

Strover LT, Malmström J, Travas-Sejdic J.

Chem Rec. 2016 Feb;16(1):393-418. doi: 10.1002/tcr.201500216. Epub 2016 Jan 20.

PMID:
26785693

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