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Items: 47

1.

Application of convolutional neural networks to breast biopsies to delineate tissue correlates of mammographic breast density.

Mullooly M, Ehteshami Bejnordi B, Pfeiffer RM, Fan S, Palakal M, Hada M, Vacek PM, Weaver DL, Shepherd JA, Fan B, Mahmoudzadeh AP, Wang J, Malkov S, Johnson JM, Herschorn SD, Sprague BL, Hewitt S, Brinton LA, Karssemeijer N, van der Laak J, Beck A, Sherman ME, Gierach GL.

NPJ Breast Cancer. 2019 Nov 19;5:43. doi: 10.1038/s41523-019-0134-6. eCollection 2019.

2.

Using Digital Pathology to Understand Epithelial Characteristics of Benign Breast Disease among Women Undergoing Diagnostic Image-Guided Breast Biopsy.

Mullooly M, Puvanesarajah S, Fan S, Pfeiffer RM, Olsson LT, Hada M, Kirk EL, Vacek PM, Weaver DL, Shepherd J, Mahmoudzadeh A, Wang J, Malkov S, Johnson JM, Hewitt SM, Herschorn SD, Sherman ME, Troester MA, Gierach GL.

Cancer Prev Res (Phila). 2019 Dec;12(12):861-870. doi: 10.1158/1940-6207.CAPR-19-0120. Epub 2019 Oct 23.

PMID:
31645342
3.

Relationship of circulating insulin-like growth factor-I and binding proteins 1-7 with mammographic density among women undergoing image-guided diagnostic breast biopsy.

Hada M, Oh H, Pfeiffer RM, Falk RT, Fan S, Mullooly M, Pollak M, Geller B, Vacek PM, Weaver D, Shepherd J, Wang J, Fan B, Mahmoudzadeh AP, Malkov S, Herschorn S, Brinton LA, Sherman ME, Gierach GL.

Breast Cancer Res. 2019 Jul 23;21(1):81. doi: 10.1186/s13058-019-1162-8.

4.

Deep learning networks find unique mammographic differences in previous negative mammograms between interval and screen-detected cancers: a case-case study.

Hinton B, Ma L, Mahmoudzadeh AP, Malkov S, Fan B, Greenwood H, Joe B, Lee V, Kerlikowske K, Shepherd J.

Cancer Imaging. 2019 Jun 22;19(1):41. doi: 10.1186/s40644-019-0227-3.

5.

Derived mammographic masking measures based on simulated lesions predict the risk of interval cancer after controlling for known risk factors: a case-case analysis.

Hinton B, Ma L, Mahmoudzadeh AP, Malkov S, Fan B, Greenwood H, Joe B, Lee V, Strand F, Kerlikowske K, Shepherd J.

Med Phys. 2019 Mar;46(3):1309-1316. doi: 10.1002/mp.13410. Epub 2019 Feb 14.

PMID:
30697755
6.

Combined Benefit of Quantitative Three-Compartment Breast Image Analysis and Mammography Radiomics in the Classification of Breast Masses in a Clinical Data Set.

Drukker K, Giger ML, Joe BN, Kerlikowske K, Greenwood H, Drukteinis JS, Niell B, Fan B, Malkov S, Avila J, Kazemi L, Shepherd J.

Radiology. 2019 Mar;290(3):621-628. doi: 10.1148/radiol.2018180608. Epub 2018 Dec 11.

PMID:
30526359
7.

Automated and Clinical Breast Imaging Reporting and Data System Density Measures Predict Risk for Screen-Detected and Interval Cancers: A Case-Control Study.

Kerlikowske K, Scott CG, Mahmoudzadeh AP, Ma L, Winham S, Jensen MR, Wu FF, Malkov S, Pankratz VS, Cummings SR, Shepherd JA, Brandt KR, Miglioretti DL, Vachon CM.

Ann Intern Med. 2018 Jun 5;168(11):757-765. doi: 10.7326/M17-3008. Epub 2018 May 1.

8.

Structural disorder of plasmid-encoded proteins in Bacteria and Archaea.

Mitić NS, Malkov SN, Kovačević JJ, Pavlović-Lažetić GM, Beljanski MV.

BMC Bioinformatics. 2018 Apr 25;19(1):158. doi: 10.1186/s12859-018-2158-6.

9.

New software for collecting data from the organized cervical cancer screening program in Serbia. Are we on the threshold of a new screening registry? - A multicentric study.

Naumovic T, Lakic V, Jovicevic A, Ilic D, Milosevic P, Stevic-Gajic V, Antonijevic A, Milovanovic N, Magdic I, Koricanac R, Malkov S, Grkavac I, Mihajlovic M, Djuricic S, Zivkovic B, Stegic U, Milovanovic Z, Opric D, Knezevic M, Jovanovic V, Todorovic Z, Todorovic D.

J BUON. 2017 Jan-Feb;22(1):58-63.

10.

Longitudinal Changes in Volumetric Breast Density with Tamoxifen and Aromatase Inhibitors.

Engmann NJ, Scott CG, Jensen MR, Ma L, Brandt KR, Mahmoudzadeh AP, Malkov S, Whaley DH, Hruska CB, Wu FF, Winham SJ, Miglioretti DL, Norman AD, Heine JJ, Shepherd J, Pankratz VS, Vachon CM, Kerlikowske K.

Cancer Epidemiol Biomarkers Prev. 2017 Jun;26(6):930-937. doi: 10.1158/1055-9965.EPI-16-0882. Epub 2017 Feb 1.

11.

Determinants of volumetric breast density in Chilean premenopausal women.

Pereira A, Garmendia ML, Uauy R, Neira P, Lopez-Arana S, Malkov S, Shepherd J.

Breast Cancer Res Treat. 2017 Apr;162(2):343-352. doi: 10.1007/s10549-017-4126-7. Epub 2017 Jan 28.

PMID:
28132392
12.

Erratum to: Mammographic texture and risk of breast cancer by tumor type and estrogen receptor status.

Malkov S, Shepherd JA, Scott CG, Tamimi RM, Ma L, Bertrand KA, Couch F, Jensen MR, Mahmoudzadeh AP, Fan B, Norman A, Brandt KR, Pankratz VS, Vachon CM, Kerlikowske K.

Breast Cancer Res. 2017 Jan 4;19(1):1. doi: 10.1186/s13058-016-0797-y. No abstract available.

13.

Mammographic texture and risk of breast cancer by tumor type and estrogen receptor status.

Malkov S, Shepherd JA, Scott CG, Tamimi RM, Ma L, Bertrand KA, Couch F, Jensen MR, Mahmoudzadeh AP, Fan B, Norman A, Brandt KR, Pankratz VS, Vachon CM, Kerlikowske K.

Breast Cancer Res. 2016 Dec 6;18(1):122. Erratum in: Breast Cancer Res. 2017 Jan 4;19(1):1.

14.

Relationships between mammographic density, tissue microvessel density, and breast biopsy diagnosis.

Felix AS, Lenz P, Pfeiffer RM, Hewitt SM, Morris J, Patel DA, Geller B, Vacek PM, Weaver DL, Chicoine RE, Shepherd J, Mahmoudzadeh AP, Wang J, Fan B, Malkov S, Herschorn SD, Johnson JM, Cora RL, Brinton LA, Sherman ME, Gierach GL.

Breast Cancer Res. 2016 Aug 23;18(1):88. doi: 10.1186/s13058-016-0746-9.

15.

Circulating insulin-like growth factor-I, insulin-like growth factor binding protein-3 and terminal duct lobular unit involution of the breast: a cross-sectional study of women with benign breast disease.

Horne HN, Sherman ME, Pfeiffer RM, Figueroa JD, Khodr ZG, Falk RT, Pollak M, Patel DA, Palakal MM, Linville L, Papathomas D, Geller B, Vacek PM, Weaver DL, Chicoine R, Shepherd J, Mahmoudzadeh AP, Wang J, Fan B, Malkov S, Herschorn S, Hewitt SM, Brinton LA, Gierach GL.

Breast Cancer Res. 2016 Feb 18;18(1):24. doi: 10.1186/s13058-016-0678-4.

16.

Comparison of Clinical and Automated Breast Density Measurements: Implications for Risk Prediction and Supplemental Screening.

Brandt KR, Scott CG, Ma L, Mahmoudzadeh AP, Jensen MR, Whaley DH, Wu FF, Malkov S, Hruska CB, Norman AD, Heine J, Shepherd J, Pankratz VS, Kerlikowske K, Vachon CM.

Radiology. 2016 Jun;279(3):710-9. doi: 10.1148/radiol.2015151261. Epub 2015 Dec 22.

17.

Relationship of Terminal Duct Lobular Unit Involution of the Breast with Area and Volume Mammographic Densities.

Gierach GL, Patel DA, Pfeiffer RM, Figueroa JD, Linville L, Papathomas D, Johnson JM, Chicoine RE, Herschorn SD, Shepherd JA, Wang J, Malkov S, Vacek PM, Weaver DL, Fan B, Mahmoudzadeh AP, Palakal M, Xiang J, Oh H, Horne HN, Sprague BL, Hewitt SM, Brinton LA, Sherman ME.

Cancer Prev Res (Phila). 2016 Feb;9(2):149-58. doi: 10.1158/1940-6207.CAPR-15-0282. Epub 2015 Dec 8.

18.

The effect of change in body mass index on volumetric measures of mammographic density.

Hart V, Reeves KW, Sturgeon SR, Reich NG, Sievert LL, Kerlikowske K, Ma L, Shepherd J, Tice JA, Mahmoudzadeh AP, Malkov S, Sprague BL.

Cancer Epidemiol Biomarkers Prev. 2015 Nov;24(11):1724-30. doi: 10.1158/1055-9965.EPI-15-0330. Epub 2015 Aug 27.

19.

Hip Fractures Risk in Older Men and Women Associated With DXA-Derived Measures of Thigh Subcutaneous Fat Thickness, Cross-Sectional Muscle Area, and Muscle Density.

Malkov S, Cawthon PM, Peters KW, Cauley JA, Murphy RA, Visser M, Wilson JP, Harris T, Satterfield S, Cummings S, Shepherd JA; Health ABC Study.

J Bone Miner Res. 2015 Aug;30(8):1414-21. doi: 10.1002/jbmr.2469. Epub 2015 May 21.

20.

What are preferred water-aromatic interactions in proteins and crystal structures of small molecules?

Janjić GV, Malkov SN, Zivković MV, Zarić SD.

Phys Chem Chem Phys. 2014 Nov 21;16(43):23549-53. doi: 10.1039/c4cp00929k. Epub 2014 Oct 1.

PMID:
25271703
21.

Automated Volumetric Breast Density derived by Shape and Appearance Modeling.

Malkov S, Kerlikowske K, Shepherd J.

Proc SPIE Int Soc Opt Eng. 2014 Mar 22;9034:90342T.

22.
23.

What are the preferred horizontal displacements of aromatic-aromatic interactions in proteins? Comparison with the calculated benzene-benzene potential energy surface.

Ninković DB, Andrić JM, Malkov SN, Zarić SD.

Phys Chem Chem Phys. 2014 Jun 21;16(23):11173-7. doi: 10.1039/c3cp54474e. Epub 2014 May 7.

PMID:
24805772
24.

Mammographic quantitative image analysis and biologic image composition for breast lesion characterization and classification.

Drukker K, Duewer F, Giger ML, Malkov S, Flowers CI, Joe B, Kerlikowske K, Drukteinis JS, Li H, Shepherd JA.

Med Phys. 2014 Mar;41(3):031915. doi: 10.1118/1.4866221.

25.

Agreement of mammographic measures of volumetric breast density to MRI.

Wang J, Azziz A, Fan B, Malkov S, Klifa C, Newitt D, Yitta S, Hylton N, Kerlikowske K, Shepherd JA.

PLoS One. 2013 Dec 4;8(12):e81653. doi: 10.1371/journal.pone.0081653. eCollection 2013.

26.

Volume of mammographic density and risk of breast cancer.

Shepherd JA, Kerlikowske K, Ma L, Duewer F, Fan B, Wang J, Malkov S, Vittinghoff E, Cummings SR.

Cancer Epidemiol Biomarkers Prev. 2011 Jul;20(7):1473-82. doi: 10.1158/1055-9965.EPI-10-1150. Epub 2011 May 24.

27.

Bioinformatics analysis of disordered proteins in prokaryotes.

Pavlović-Lažetić GM, Mitić NS, Kovačević JJ, Obradović Z, Malkov SN, Beljanski MV.

BMC Bioinformatics. 2011 Mar 2;12:66. doi: 10.1186/1471-2105-12-66.

28.

Comparison of breast density measured by dual energy X-ray absorptiometry with mammographic density among adult women in Hawaii.

Maskarinec G, Morimoto Y, Daida Y, Laidevant A, Malkov S, Shepherd JA, Novotny R.

Cancer Epidemiol. 2011 Apr;35(2):188-93. doi: 10.1016/j.canep.2010.06.009. Epub 2010 Aug 4.

29.

Compositional breast imaging using a dual-energy mammography protocol.

Laidevant AD, Malkov S, Flowers CI, Kerlikowske K, Shepherd JA.

Med Phys. 2010 Jan;37(1):164-74.

30.

Single x-ray absorptiometry method for the quantitative mammographic measure of fibroglandular tissue volume.

Malkov S, Wang J, Kerlikowske K, Cummings SR, Shepherd JA.

Med Phys. 2009 Dec;36(12):5525-36.

31.

A reexamination of correlations of amino acids with particular secondary structures.

Malkov SN, Zivković MV, Beljanski MV, Stojanović SD, Zarić SD.

Protein J. 2009 Feb;28(2):74-86. doi: 10.1007/s10930-009-9166-3.

PMID:
19280326
32.

Breast density assessment in adolescent girls using dual-energy X-ray absorptiometry: a feasibility study.

Shepherd JA, Malkov S, Fan B, Laidevant A, Novotny R, Maskarinec G.

Cancer Epidemiol Biomarkers Prev. 2008 Jul;17(7):1709-13. doi: 10.1158/1055-9965.EPI-08-0006.

33.

A reexamination of the propensities of amino acids towards a particular secondary structure: classification of amino acids based on their chemical structure.

Malkov SN, Zivković MV, Beljanski MV, Hall MB, Zarić SD.

J Mol Model. 2008 Aug;14(8):769-75. doi: 10.1007/s00894-008-0313-0. Epub 2008 May 27.

PMID:
18504624
34.

Significant delay of lethal outcome in cancer patients due to peroral administration of Bacillus oligonitrophilus KU-1.

Malkov SV, Markelov VV, Polozov GY, Barabanschikov BI, Kozhevnikov AY, Trushin MV.

ScientificWorldJournal. 2006 Jul 8;6:2177-87.

35.

Is there any alternative to conventional anticancer treatment? Comments to: Trustworthy alteration and improvement in adjuvant treatment of colon cancer. Ali Harlak, Atilla Soran Med Sci Monit, 2006; 12(3): RA46-52.

Malkov SV, Markelov VV, Barabanschikov BI, Polozov GY, Trushin MV.

Med Sci Monit. 2006 Aug;12(8):LE16. Epub 2006 Jul 12. No abstract available.

PMID:
16865073
36.

Oral administration of Bacillus oligonitrophilus KU-1 may prevent tumors.

Malkov S, Markelov VV, Barabanschikov BI, Marotta F, Trushin MV.

Asian Pac J Cancer Prev. 2006 Apr-Jun;7(2):343. No abstract available.

37.

Reduction of the crop plant allergenicity due to soil treatment with Bacillus oligonitrophilus KU-1 strain.

Malkov SV, Markelov VV, Barabanschikov BI, Potemkina AM, Polozov GY, Kozhevnikov AY, Trushin MV.

Riv Biol. 2006 Jan-Apr;99(1):161-5. No abstract available.

PMID:
16791795
38.

Antitumor features of Bacillus oligonitrophilus KU-1 strain.

Malkov SV, Markelov VV, Polozov GY, Sobchuk LI, Zakharova NG, Barabanschikov BI, Kozhevnikov AY, Vaphin RA, Trushin MV.

J Microbiol Immunol Infect. 2005 Apr;38(2):96-104.

PMID:
15843853
39.

Application of generalized two-dimensional infrared correlation spectroscopy to the study of a hydrogen-bonded blend.

Huang H, Malkov S, Coleman MM, Painter PC.

Appl Spectrosc. 2004 Sep;58(9):1074-81.

PMID:
15479524
40.

[Phenotypic characterization of Bacillus subtilis mutants with decreased exonuclease I activity].

Dzhanga AA, Barabanshchikov BI, Malkov SV.

Genetika. 1997 Mar;33(3):314-20. Russian.

PMID:
9244761
41.

[A sanitary helminthological assessment of different methods of salting fish in the Vyatka and Kama River basins].

Kotel'nikov GA, Malkov SN.

Med Parazitol (Mosk). 1992 Mar-Apr;(2):28-9. Russian. No abstract available.

PMID:
1435532
42.

[The opisthorchiasis situation in the Kama-Vyatka river basin].

Kotel'nikov GA, Malkov SN.

Med Parazitol (Mosk). 1991 Mar-Apr;(2):9-10. Russian.

PMID:
1829789
43.

[The effect of silicon metabolism on genetic transformation in Bacillus subtilis].

Malkov SV, Barabanshchikov BI.

Mol Gen Mikrobiol Virusol. 1991 Feb;(2):9-11. Russian.

PMID:
1903179
44.

[Restoration of the recombination ability of Bacillus subtilis mutants, resistant to novobiocin during an increase in exonuclease I activity].

Barabanshchikov BI, Malkov SV, Libetants B.

Mol Gen Mikrobiol Virusol. 1990 Sep;(9):27-9. Russian. No abstract available.

PMID:
2123964
45.

[Reduced frequency of homologous recombination in Bacillus subtilis mutants resistant to novobiocin].

Barabanshchikov BI, Malkov SV, Belov IS, Khabibullina GN.

Mol Gen Mikrobiol Virusol. 1988 Sep;(9):39-43. Russian.

PMID:
3145419
46.
47.

[Capacity of Bacillus mesentericus for certain kinds of genetic exchange].

Malkov SV, Prozorov AA.

Genetika. 1983 Jul;19(7):1091-6. Russian.

PMID:
6413299

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