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Items: 1 to 50 of 121

1.

In vivo RNA editing of point mutations via RNA-guided adenosine deaminases.

Katrekar D, Chen G, Meluzzi D, Ganesh A, Worlikar A, Shih YR, Varghese S, Mali P.

Nat Methods. 2019 Feb 8. doi: 10.1038/s41592-019-0323-0. [Epub ahead of print]

PMID:
30737497
2.

Investigation of Genetic Dependencies Using CRISPR-Cas9-based Competition Assays.

Deshpande A, Chen BR, Zhao L, Saddoris K, Kerr M, Zhu N, Mali P, Deshpande AJ.

J Vis Exp. 2019 Jan 7;(143). doi: 10.3791/58710.

PMID:
30663717
3.

Sequence-Specific Detection of Aristolochia DNA - A Simple Test for Contamination of Herbal Products.

Sgamma T, Masiero E, Mali P, Mahat M, Slater A.

Front Plant Sci. 2018 Dec 11;9:1828. doi: 10.3389/fpls.2018.01828. eCollection 2018.

4.

Mapping Cellular Reprogramming via Pooled Overexpression Screens with Paired Fitness and Single-Cell RNA-Sequencing Readout.

Parekh U, Wu Y, Zhao D, Worlikar A, Shah N, Zhang K, Mali P.

Cell Syst. 2018 Nov 28;7(5):548-555.e8. doi: 10.1016/j.cels.2018.10.008. Epub 2018 Nov 14.

PMID:
30448000
5.

Dynamics of Frenkel Excitons in Pentacene.

Gombar S, Mali P, Pantić M, Pavkov-Hrvojević M, Radošević S.

Materials (Basel). 2018 Nov 8;11(11). pii: E2219. doi: 10.3390/ma11112219.

6.

Facile Engineering of Long-Term Culturable Ex Vivo Vascularized Tissues Using Biologically Derived Matrices.

Hu M, Dailamy A, Lei XY, Parekh U, McDonald D, Kumar A, Mali P.

Adv Healthc Mater. 2018 Dec;7(23):e1800845. doi: 10.1002/adhm.201800845. Epub 2018 Oct 23.

PMID:
30369101
7.

Utility of serological biomarkers for giant cell arteritis in a large cohort of treatment-naïve patients.

Burja B, Feichtinger J, Lakota K, Thallinger GG, Sodin-Semrl S, Kuret T, Rotar Ž, Ješe R, Žigon P, Čučnik S, Mali P, Praprotnik S, Tomšič M, Hočevar A.

Clin Rheumatol. 2019 Feb;38(2):317-329. doi: 10.1007/s10067-018-4240-x. Epub 2018 Aug 24.

PMID:
30143961
8.

Developmental barcoding of whole mouse via homing CRISPR.

Kalhor R, Kalhor K, Mejia L, Leeper K, Graveline A, Mali P, Church GM.

Science. 2018 Aug 31;361(6405). pii: eaat9804. doi: 10.1126/science.aat9804. Epub 2018 Aug 9.

PMID:
30093604
9.

Functional Genomics via CRISPR-Cas.

Ford K, McDonald D, Mali P.

J Mol Biol. 2019 Jan 4;431(1):48-65. doi: 10.1016/j.jmb.2018.06.034. Epub 2018 Jun 28. Review.

PMID:
29959923
10.

In Situ Gene Therapy via AAV-CRISPR-Cas9-Mediated Targeted Gene Regulation.

Moreno AM, Fu X, Zhu J, Katrekar D, Shih YV, Marlett J, Cabotaje J, Tat J, Naughton J, Lisowski L, Varghese S, Zhang K, Mali P.

Mol Ther. 2018 Jul 5;26(7):1818-1827. doi: 10.1016/j.ymthe.2018.04.017. Epub 2018 Apr 25.

PMID:
29754775
11.

Naturally occurring antibodies against serum amyloid A reduce IL-6 release from peripheral blood mononuclear cells.

Kuret T, Lakota K, Mali P, Čučnik S, Praprotnik S, Tomšič M, Sodin-Semrl S.

PLoS One. 2018 Apr 4;13(4):e0195346. doi: 10.1371/journal.pone.0195346. eCollection 2018.

12.

Triacylglycerol: nourishing molecule in endurance of Mycobacterium tuberculosis.

Mali PC, Meena LS.

J Biosci. 2018 Mar;43(1):149-154. Review.

13.

Oligonucleotide conjugated multi-functional adeno-associated viruses.

Katrekar D, Moreno AM, Chen G, Worlikar A, Mali P.

Sci Rep. 2018 Feb 26;8(1):3589. doi: 10.1038/s41598-018-21742-x.

14.

Combinatorial CRISPR-Cas9 Metabolic Screens Reveal Critical Redox Control Points Dependent on the KEAP1-NRF2 Regulatory Axis.

Zhao D, Badur MG, Luebeck J, Magaña JH, Birmingham A, Sasik R, Ahn CS, Ideker T, Metallo CM, Mali P.

Mol Cell. 2018 Feb 15;69(4):699-708.e7. doi: 10.1016/j.molcel.2018.01.017.

15.

Corrigendum: Engineering and optimising deaminase fusions for genome editing.

Yang L, Briggs AW, Chew WL, Mali P, Guell M, Aach J, Goodman DB, Cox D, Kan Y, Lesha E, Soundararajan V, Zhang F, Church G.

Nat Commun. 2017 Oct 9;8:16169. doi: 10.1038/ncomms16169.

16.

Devil's staircase and the absence of chaos in the dc- and ac-driven overdamped Frenkel-Kontorova model.

Sokolović I, Mali P, Odavić J, Radošević S, Medvedeva SY, Botha AE, Shukrinov YM, Tekić J.

Phys Rev E. 2017 Aug;96(2-1):022210. doi: 10.1103/PhysRevE.96.022210. Epub 2017 Aug 22.

PMID:
28950628
17.

1,3-Dipolar Cycloaddition Reactions for the Synthesis of Novel Oxindole Derivatives and Their Cytotoxic Properties.

Mali PR, Shirsat PK, Khomane N, Nayak L, Nanubolu JB, Meshram HM.

ACS Comb Sci. 2017 Oct 9;19(10):633-639. doi: 10.1021/acscombsci.7b00044. Epub 2017 Sep 7.

PMID:
28816439
18.

Euphorbia neriifolia L.: Review on botany, ethnomedicinal uses, phytochemistry and biological activities.

Mali PY, Panchal SS.

Asian Pac J Trop Med. 2017 May;10(5):430-438. doi: 10.1016/j.apjtm.2017.05.003. Epub 2017 May 18. Review.

19.

Cross-Coupling Reactions of Aryldiazonium Salts with Allylsilanes under Merged Gold/Visible-Light Photoredox Catalysis.

Akram MO, Mali PS, Patil NT.

Org Lett. 2017 Jun 16;19(12):3075-3078. doi: 10.1021/acs.orglett.7b01148. Epub 2017 Jun 7.

PMID:
28590758
20.

Genetic interaction mapping in mammalian cells using CRISPR interference.

Du D, Roguev A, Gordon DE, Chen M, Chen SH, Shales M, Shen JP, Ideker T, Mali P, Qi LS, Krogan NJ.

Nat Methods. 2017 Jun;14(6):577-580. doi: 10.1038/nmeth.4286. Epub 2017 May 8.

21.

Combinatorial CRISPR-Cas9 screens for de novo mapping of genetic interactions.

Shen JP, Zhao D, Sasik R, Luebeck J, Birmingham A, Bojorquez-Gomez A, Licon K, Klepper K, Pekin D, Beckett AN, Sanchez KS, Thomas A, Kuo CC, Du D, Roguev A, Lewis NE, Chang AN, Kreisberg JF, Krogan N, Qi L, Ideker T, Mali P.

Nat Methods. 2017 Jun;14(6):573-576. doi: 10.1038/nmeth.4225. Epub 2017 Mar 20.

22.

Establishing Prenatal Surgery for Myelomeningocele in Asia: The Singapore Consensus.

Wataganara T, Seshadri S, Leung TY, Matter C, Ngerncham M, Triyasunant N, Mali PV, Biswas A, Nawapun K, Phithakwatchara N, Flake AW, Johnson MP, Biswas A, Choolani M.

Fetal Diagn Ther. 2017;41(3):161-178. doi: 10.1159/000452218. Epub 2017 Feb 21. Review.

23.

Therapeutic genome engineering via CRISPR-Cas systems.

Moreno AM, Mali P.

Wiley Interdiscip Rev Syst Biol Med. 2017 Jul;9(4). doi: 10.1002/wsbm.1380. Epub 2017 Feb 15. Review.

PMID:
28198142
24.

Rapidly evolving homing CRISPR barcodes.

Kalhor R, Mali P, Church GM.

Nat Methods. 2017 Feb;14(2):195-200. doi: 10.1038/nmeth.4108. Epub 2016 Dec 5.

25.

Engineering and optimising deaminase fusions for genome editing.

Yang L, Briggs AW, Chew WL, Mali P, Guell M, Aach J, Goodman DB, Cox D, Kan Y, Lesha E, Soundararajan V, Zhang F, Church G.

Nat Commun. 2016 Nov 2;7:13330. doi: 10.1038/ncomms13330. Erratum in: Nat Commun. 2017 Oct 09;8:16169.

26.

International forum: an investigation of iron status in blood donors.

Vuk T, Magnussen K, De Kort W, Folléa G, Liumbruno GM, Schennach H, Vandewalle G, Compernolle V, Masharova N, Karakatsiani G, Argyrou I, Řeháček V, Khanirzajeva G, Castrén J, Danic B, Djoudi R, Woimant G, Mueller MM, Politis C, Vaglio S, Daugavvanaga A, Vilutytė E, Faber JC, Borg-Aquilina D, Van Den Burg P, Bokhorst A, Pogłód R, Antoniewicz-Papis J, Muon M, Burta OL, Rosochová J, Mali P, Vesga MA, Schneider K, Norda R, Anderson N.

Blood Transfus. 2017 Jan;15(1):20-41. doi: 10.2450/2016.0101-16. Epub 2016 Sep 7. No abstract available.

27.

A multifunctional AAV-CRISPR-Cas9 and its host response.

Chew WL, Tabebordbar M, Cheng JK, Mali P, Wu EY, Ng AH, Zhu K, Wagers AJ, Church GM.

Nat Methods. 2016 Oct;13(10):868-74. doi: 10.1038/nmeth.3993. Epub 2016 Sep 5.

28.

Pancreatitis in pregnancy: etiology, diagnosis, treatment, and outcomes.

Mali P.

Hepatobiliary Pancreat Dis Int. 2016 Aug;15(4):434-8.

PMID:
27498585
29.

Are sex steroids essential for gonadal differentiation of the ornate frog, Microhyla ornata?

Mali PV, Gramapurohit NP.

Gen Comp Endocrinol. 2016 Jul 1;233:63-72. doi: 10.1016/j.ygcen.2016.05.019. Epub 2016 May 12.

PMID:
27181751
30.

Pharmacological potentials of Premna integrifolia L.

Mali PY.

Anc Sci Life. 2016 Jan-Mar;35(3):132-42. doi: 10.4103/0257-7941.179864. Review.

31.
32.

Tolvaptan for SIADH in Myelodysplastic Syndrome with Blast Crisis.

Mali P, Muduganti SR, Mujibur R, Murali N.

WMJ. 2015 Apr;114(2):66-8.

33.

Premna integrifolia L.: A review of its biodiversity, traditional uses and phytochemistry.

Mali PY.

Anc Sci Life. 2015 Jul-Sep;35(1):4-11. doi: 10.4103/0257-7941.165624. Review.

34.

Management of apicomarginal defect in esthetic region associated with a tooth with anomalies.

Meharwade VV, Shah DY, Mali PP, Meharwade VV.

Restor Dent Endod. 2015 Nov;40(4):314-21. doi: 10.5395/rde.2015.40.4.314. Epub 2015 Jun 24.

35.

Effect of Camphylobacter rectus on Serum Iron and Transferrin- In-Vivo Findings.

Medikeri RS, Lele SV, Mali PP, Jain PM, Darawade DA, Medikeri MR.

J Clin Diagn Res. 2015 Jul;9(7):ZC26-30. doi: 10.7860/JCDR/2015/14165.6189. Epub 2015 Jul 1.

36.

Rare Case of Vasculitis of the Hepatic Artery.

Mali P, Muduganti SR, Goldberg J.

Clin Med Res. 2015 Dec;13(3-4):169-72. doi: 10.3121/cmr.2015.1290. Epub 2015 Sep 20.

37.

Pattern of gonadal differentiation and development up to sexual maturity in the frogs, Microhyla ornata and Hylarana malabarica: A comparative study.

Mali PV, Gramapurohit NP.

J Exp Zool A Ecol Genet Physiol. 2015 Nov;323(9):666-78. doi: 10.1002/jez.1958. Epub 2015 Sep 11.

PMID:
26361250
38.

Unraveling CRISPR-Cas9 genome engineering parameters via a library-on-library approach.

Chari R, Mali P, Moosburner M, Church GM.

Nat Methods. 2015 Sep;12(9):823-6. doi: 10.1038/nmeth.3473. Epub 2015 Jul 13.

39.

Farey sequence in the appearance of subharmonic Shapiro steps.

Odavić J, Mali P, Tekić J.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 May;91(5):052904. Epub 2015 May 8.

PMID:
26066226
40.

Quantification of Selenomonas sputigena in Chronic Periodontitis in Smokers Using 16S rDNA Based PCR Analysis.

Medikeri RS, Lele SV, Jain PM, Mali P, Medikeri MR.

J Clin Diagn Res. 2015 Apr;9(4):ZC13-7. doi: 10.7860/JCDR/2015/12550.5782. Epub 2015 Apr 1.

41.

Coronary dissection in a patient with essential thrombocytosis.

Mali P, Muduganti S, Buddemeier KJ.

WMJ. 2015 Feb;114(1):26-9.

42.

Outcomes in Dieulafoy's Lesion: A 10-Year Clinical Review.

Kanth R, Mali P, Roy PK.

Dig Dis Sci. 2015 Jul;60(7):2097-103. doi: 10.1007/s10620-015-3568-1. Epub 2015 Feb 8.

PMID:
25663242
43.

Comparison of multiplex RT-PCR with virus isolation for detection, typing and sub-typing of influenza virus from influenza-like illness cases.

Dhakad S, Mali PC, Kaushik S, Lal AA, Broor S.

Indian J Med Microbiol. 2015 Jan-Mar;33(1):73-7. doi: 10.4103/0255-0857.148383.

45.

Multi-kilobase homozygous targeted gene replacement in human induced pluripotent stem cells.

Byrne SM, Ortiz L, Mali P, Aach J, Church GM.

Nucleic Acids Res. 2015 Feb 18;43(3):e21. doi: 10.1093/nar/gku1246. Epub 2014 Nov 20.

46.

Genome editing in human stem cells.

Byrne SM, Mali P, Church GM.

Methods Enzymol. 2014;546:119-38. doi: 10.1016/B978-0-12-801185-0.00006-4.

47.

Streptococcus pyogenes sternoclavicular septic arthritis in a healthy adult.

Savcic-Kos RM, Mali P, Abraham A, Issa M, Rangu V, Nasser R.

Clin Med Res. 2014 Dec;12(3-4):155-9. doi: 10.3121/cmr.2013.1185. Epub 2014 Mar 25.

48.

Highly multiplexed subcellular RNA sequencing in situ.

Lee JH, Daugharthy ER, Scheiman J, Kalhor R, Yang JL, Ferrante TC, Terry R, Jeanty SS, Li C, Amamoto R, Peters DT, Turczyk BM, Marblestone AH, Inverso SA, Bernard A, Mali P, Rios X, Aach J, Church GM.

Science. 2014 Mar 21;343(6177):1360-3. doi: 10.1126/science.1250212. Epub 2014 Feb 27.

49.

CRISPR-Cas-mediated targeted genome editing in human cells.

Yang L, Mali P, Kim-Kiselak C, Church G.

Methods Mol Biol. 2014;1114:245-67. doi: 10.1007/978-1-62703-761-7_16.

PMID:
24557908
50.

A review on phyto-pharmacological potentials of Euphorbia thymifolia L.

Mali PY, Panchal SS.

Anc Sci Life. 2013 Jan;32(3):165-72. doi: 10.4103/0257-7941.123001. Review.

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