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Items: 20

1.

Construction of a neonatal cortical surface atlas using Multimodal Surface Matching in the Developing Human Connectome Project.

Bozek J, Makropoulos A, Schuh A, Fitzgibbon S, Wright R, Glasser MF, Coalson TS, O'Muircheartaigh J, Hutter J, Price AN, Cordero-Grande L, Teixeira RPAG, Hughes E, Tusor N, Baruteau KP, Rutherford MA, Edwards AD, Hajnal JV, Smith SM, Rueckert D, Jenkinson M, Robinson EC.

Neuroimage. 2018 Jun 13;179:11-29. doi: 10.1016/j.neuroimage.2018.06.018. [Epub ahead of print]

PMID:
29890325
2.

Automated processing pipeline for neonatal diffusion MRI in the developing Human Connectome Project.

Bastiani M, Andersson JLR, Cordero-Grande L, Murgasova M, Hutter J, Price AN, Makropoulos A, Fitzgibbon SP, Hughes E, Rueckert D, Victor S, Rutherford M, Edwards AD, Smith SM, Tournier JD, Hajnal JV, Jbabdi S, Sotiropoulos SN.

Neuroimage. 2018 May 28. pii: S1053-8119(18)30488-9. doi: 10.1016/j.neuroimage.2018.05.064. [Epub ahead of print] Review.

3.

Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo.

Batalle D, O'Muircheartaigh J, Makropoulos A, Kelly CJ, Dimitrova R, Hughes EJ, Hajnal JV, Zhang H, Alexander DC, Edwards AD, Counsell SJ.

Neuroimage. 2018 May 23. pii: S1053-8119(18)30460-9. doi: 10.1016/j.neuroimage.2018.05.046. [Epub ahead of print]

4.

The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction.

Makropoulos A, Robinson EC, Schuh A, Wright R, Fitzgibbon S, Bozek J, Counsell SJ, Steinweg J, Vecchiato K, Passerat-Palmbach J, Lenz G, Mortari F, Tenev T, Duff EP, Bastiani M, Cordero-Grande L, Hughes E, Tusor N, Tournier JD, Hutter J, Price AN, Teixeira RPAG, Murgasova M, Victor S, Kelly C, Rutherford MA, Smith SM, Edwards AD, Hajnal JV, Jenkinson M, Rueckert D.

Neuroimage. 2018 Jun;173:88-112. doi: 10.1016/j.neuroimage.2018.01.054. Epub 2018 Jan 31.

PMID:
29409960
5.

Impaired development of the cerebral cortex in infants with congenital heart disease is correlated to reduced cerebral oxygen delivery.

Kelly CJ, Makropoulos A, Cordero-Grande L, Hutter J, Price A, Hughes E, Murgasova M, Teixeira RPAG, Steinweg JK, Kulkarni S, Rahman L, Zhang H, Alexander DC, Pushparajah K, Rueckert D, Hajnal JV, Simpson J, Edwards AD, Rutherford MA, Counsell SJ.

Sci Rep. 2017 Nov 8;7(1):15088. doi: 10.1038/s41598-017-14939-z.

6.

Multimodal surface matching with higher-order smoothness constraints.

Robinson EC, Garcia K, Glasser MF, Chen Z, Coalson TS, Makropoulos A, Bozek J, Wright R, Schuh A, Webster M, Hutter J, Price A, Cordero Grande L, Hughes E, Tusor N, Bayly PV, Van Essen DC, Smith SM, Edwards AD, Hajnal J, Jenkinson M, Glocker B, Rueckert D.

Neuroimage. 2018 Feb 15;167:453-465. doi: 10.1016/j.neuroimage.2017.10.037. Epub 2017 Oct 31.

PMID:
29100940
7.

A review on automatic fetal and neonatal brain MRI segmentation.

Makropoulos A, Counsell SJ, Rueckert D.

Neuroimage. 2018 Apr 15;170:231-248. doi: 10.1016/j.neuroimage.2017.06.074. Epub 2017 Jun 28. Review.

PMID:
28666878
8.

Human brain mapping: A systematic comparison of parcellation methods for the human cerebral cortex.

Arslan S, Ktena SI, Makropoulos A, Robinson EC, Rueckert D, Parisot S.

Neuroimage. 2018 Apr 15;170:5-30. doi: 10.1016/j.neuroimage.2017.04.014. Epub 2017 Apr 13. Review.

PMID:
28412442
9.

Reproducible Large-Scale Neuroimaging Studies with the OpenMOLE Workflow Management System.

Passerat-Palmbach J, Reuillon R, Leclaire M, Makropoulos A, Robinson EC, Parisot S, Rueckert D.

Front Neuroinform. 2017 Mar 22;11:21. doi: 10.3389/fninf.2017.00021. eCollection 2017.

10.

Longitudinal Regional Brain Development and Clinical Risk Factors in Extremely Preterm Infants.

Kersbergen KJ, Makropoulos A, Aljabar P, Groenendaal F, de Vries LS, Counsell SJ, Benders MJ.

J Pediatr. 2016 Nov;178:93-100.e6. doi: 10.1016/j.jpeds.2016.08.024. Epub 2016 Sep 12.

PMID:
27634629
11.

Altered white matter and cortical structure in neonates with antenatally diagnosed isolated ventriculomegaly.

Lockwood Estrin G, Kyriakopoulou V, Makropoulos A, Ball G, Kuhendran L, Chew A, Hagberg B, Martinez-Biarge M, Allsop J, Fox M, Counsell SJ, Rutherford MA.

Neuroimage Clin. 2016 Jan 14;11:139-48. doi: 10.1016/j.nicl.2016.01.012. eCollection 2016.

12.

Regional growth and atlasing of the developing human brain.

Makropoulos A, Aljabar P, Wright R, Hüning B, Merchant N, Arichi T, Tusor N, Hajnal JV, Edwards AD, Counsell SJ, Rueckert D.

Neuroimage. 2016 Jan 15;125:456-478. doi: 10.1016/j.neuroimage.2015.10.047. Epub 2015 Oct 21.

13.

Construction of a fetal spatio-temporal cortical surface atlas from in utero MRI: Application of spectral surface matching.

Wright R, Makropoulos A, Kyriakopoulou V, Patkee PA, Koch LM, Rutherford MA, Hajnal JV, Rueckert D, Aljabar P.

Neuroimage. 2015 Oct 15;120:467-80. doi: 10.1016/j.neuroimage.2015.05.087. Epub 2015 Jun 10.

14.

Corticospinal Tract Injury Precedes Thalamic Volume Reduction in Preterm Infants with Cystic Periventricular Leukomalacia.

Kersbergen KJ, de Vries LS, Groenendaal F, van Haastert IC, Chew AT, Makropoulos A, Dawson SL, Cowan FM, Benders MJ, Counsell SJ.

J Pediatr. 2015 Aug;167(2):260-8.e3. doi: 10.1016/j.jpeds.2015.05.013. Epub 2015 Jun 6.

15.

Specialization and integration of functional thalamocortical connectivity in the human infant.

Toulmin H, Beckmann CF, O'Muircheartaigh J, Ball G, Nongena P, Makropoulos A, Ederies A, Counsell SJ, Kennea N, Arichi T, Tusor N, Rutherford MA, Azzopardi D, Gonzalez-Cinca N, Hajnal JV, Edwards AD.

Proc Natl Acad Sci U S A. 2015 May 19;112(20):6485-90. doi: 10.1073/pnas.1422638112. Epub 2015 May 4.

16.

Robust whole-brain segmentation: application to traumatic brain injury.

Ledig C, Heckemann RA, Hammers A, Lopez JC, Newcombe VF, Makropoulos A, Lötjönen J, Menon DK, Rueckert D.

Med Image Anal. 2015 Apr;21(1):40-58. doi: 10.1016/j.media.2014.12.003. Epub 2014 Dec 24.

17.

Evaluation of automatic neonatal brain segmentation algorithms: the NeoBrainS12 challenge.

Išgum I, Benders MJ, Avants B, Cardoso MJ, Counsell SJ, Gomez EF, Gui L, Hűppi PS, Kersbergen KJ, Makropoulos A, Melbourne A, Moeskops P, Mol CP, Kuklisova-Murgasova M, Rueckert D, Schnabel JA, Srhoj-Egekher V, Wu J, Wang S, de Vries LS, Viergever MA.

Med Image Anal. 2015 Feb;20(1):135-51. doi: 10.1016/j.media.2014.11.001. Epub 2014 Nov 15.

PMID:
25487610
18.

Resting State fMRI in the moving fetus: a robust framework for motion, bias field and spin history correction.

Ferrazzi G, Kuklisova Murgasova M, Arichi T, Malamateniou C, Fox MJ, Makropoulos A, Allsop J, Rutherford M, Malik S, Aljabar P, Hajnal JV.

Neuroimage. 2014 Nov 1;101:555-68. doi: 10.1016/j.neuroimage.2014.06.074. Epub 2014 Jul 6.

PMID:
25008959
19.

Automatic whole brain MRI segmentation of the developing neonatal brain.

Makropoulos A, Gousias IS, Ledig C, Aljabar P, Serag A, Hajnal JV, Edwards AD, Counsell SJ, Rueckert D.

IEEE Trans Med Imaging. 2014 Sep;33(9):1818-31. doi: 10.1109/TMI.2014.2322280. Epub 2014 May 6.

PMID:
24816548
20.

Regional changes in thalamic shape and volume with increasing age.

Hughes EJ, Bond J, Svrckova P, Makropoulos A, Ball G, Sharp DJ, Edwards AD, Hajnal JV, Counsell SJ.

Neuroimage. 2012 Nov 15;63(3):1134-42. doi: 10.1016/j.neuroimage.2012.07.043. Epub 2012 Jul 27.

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