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Items: 1 to 50 of 644

1.

Bolt: a New Age Peptide Search Engine for Comprehensive MS/MS Sequencing Through Vast Protein Databases in Minutes.

Prakash A, Ahmad S, Majumder S, Jenkins C, Orsburn B.

J Am Soc Mass Spectrom. 2019 Nov 1;30(11):2408-2418.

PMID:
31944756
2.

Partially oxidized DJ-1 inhibits α-synuclein nucleation and remodels mature α-synuclein fibrils in vitro.

Kumar R, Kumar S, Hanpude P, Singh AK, Johari T, Majumder S, Maiti TK.

Commun Biol. 2019 Oct 30;2(1):395. doi: 10.1038/s42003-019-0644-7.

PMID:
31925242
3.

Collagen receptor- and metalloproteinase-dependent hypertensive stress response in mesangial and glomerular endothelial cells.

Majumder S, Amin M, Pushpakumar S, Sen U.

Mol Cell Biochem. 2020 Jan 7. doi: 10.1007/s11010-019-03680-y. [Epub ahead of print]

PMID:
31912277
4.

The Ormdl genes regulate the sphingolipid synthesis pathway to ensure proper myelination and neurologic function in mice.

Clarke BA, Majumder S, Zhu H, Lee YT, Kono M, Li C, Khanna C, Blain H, Schwartz R, Huso VL, Byrnes C, Tuymetova G, Dunn TM, Allende ML, Proia RL.

Elife. 2019 Dec 27;8. pii: e51067. doi: 10.7554/eLife.51067.

5.

Forecasting semi-arid biome shifts in the anthropocene.

Kulmatiski A, Yu K, Mackay DS, Holdrege MC, Staver C, Parolari A, Liu Y, Majumder S, Trugman A.

New Phytol. 2019 Dec 19. doi: 10.1111/nph.16381. [Epub ahead of print]

PMID:
31853979
6.

Functional characterization and evaluation of protective efficacy of EA752-862 monoclonal antibody against B. anthracis vegetative cell and spores.

Majumder S, Das S, Kingston J, Shivakiran MS, Batra HV, Somani VK, Bhatnagar R.

Med Microbiol Immunol. 2019 Dec 6. doi: 10.1007/s00430-019-00650-5. [Epub ahead of print]

PMID:
31811379
7.

Significance of peripheral eosinophilia for diagnosis of IgG4-related disease in subjects with elevated serum IgG4 levels.

Mohapatra S, Charilaou P, Sharma A, Singh DP, Sah RP, Murray D, Majumder S, Topazian MD, Chari ST.

Pancreatology. 2019 Nov 27. pii: S1424-3903(19)30797-5. doi: 10.1016/j.pan.2019.11.016. [Epub ahead of print]

PMID:
31791884
8.

Mechanical response at peri-implant mandibular bone for variation of pore characteristics of implants: A Finite Element Study.

Sarkar S, Sahu TP, Datta A, Chandra N, Chakraborty A, Datta P, Majumder S, Chowdhury AR.

Acta Bioeng Biomech. 2019;21(2):83-93.

PMID:
31741483
9.

Green synthesis of near-infrared absorbing eugenate capped iron oxide nanoparticles for photothermal application.

Kharey P, Dutta SB, M M, Palani IA, Majumder SK, Gupta S.

Nanotechnology. 2019 Nov 12;31(9):095705. doi: 10.1088/1361-6528/ab56b6. [Epub ahead of print]

PMID:
31715590
10.

Species-wide Metabolic Interaction Network for Understanding Natural Lignocellulose Digestion in Termite Gut Microbiota.

Kundu P, Manna B, Majumder S, Ghosh A.

Sci Rep. 2019 Nov 8;9(1):16329. doi: 10.1038/s41598-019-52843-w.

11.

Partially oxidized DJ-1 inhibits α-synuclein nucleation and remodels mature α-synuclein fibrils in vitro.

Kumar R, Kumar S, Hanpude P, Singh AK, Johari T, Majumder S, Maiti TK.

Commun Biol. 2019 Oct 30;2:395. doi: 10.1038/s42003-019-0644-7. eCollection 2019.

12.

Transcriptomic analysis associated with reversal of cisplatin sensitivity in drug resistant osteosarcoma cells after a drug holiday.

Niveditha D, Sharma H, Majumder S, Mukherjee S, Chowdhury R, Chowdhury S.

BMC Cancer. 2019 Nov 5;19(1):1045. doi: 10.1186/s12885-019-6300-2.

13.

Why are we performing fewer cholecystectomies for mild acute biliary pancreatitis? Trends and predictors of cholecystectomy from the National Readmissions Database (2010-2014).

Garg SK, Bazerbachi F, Sarvepalli S, Majumder S, Vege SS.

Gastroenterol Rep (Oxf). 2019 Aug 29;7(5):331-337. doi: 10.1093/gastro/goz037. eCollection 2019 Oct.

14.

Metabolomics analysis revealed significantly higher synovial Phe/Tyr ratio in reactive arthritis and undifferentiated spondyloarthropathy.

Muhammed H, Kumar D, Dubey D, Kumar S, Chaurasia S, Guleria A, Majumder S, Singh R, Agarwal V, Misra R.

Rheumatology (Oxford). 2019 Oct 22. pii: kez493. doi: 10.1093/rheumatology/kez493. [Epub ahead of print]

PMID:
31641751
15.

In situ grown α-Cos/Co heterostructures on nitrogen doped carbon polyhedra enabling the trapping and reaction-intensification of polysulfides towards high performance lithium sulfur batteries.

Gu S, Bai Z, Majumder S, Huang B, Chen G.

Nanoscale. 2019 Nov 21;11(43):20579-20588. doi: 10.1039/c9nr07249g. Epub 2019 Oct 22.

PMID:
31637397
16.

Drug Tolerant Cells: An Emerging Target With Unique Transcriptomic Features.

Niveditha D, Sharma H, Sahu A, Majumder S, Chowdhury R, Chowdhury S.

Cancer Inform. 2019 Oct 10;18:1176935119881633. doi: 10.1177/1176935119881633. eCollection 2019.

17.

Pearl-Necklace-Like Local Ordering Drives Polypeptide Collapse.

Majumder S, Hansmann UHE, Janke W.

Macromolecules. 2019 Aug 13;52(15):5491-5498. doi: 10.1021/acs.macromol.9b00562. Epub 2019 Jul 15.

PMID:
31631912
18.

Peripheral blood monocyte counts are elevated in the pre-diagnostic phase of pancreatic cancer: A population based study.

de la Fuente J, Sharma A, Chari S, Majumder S.

Pancreatology. 2019 Dec;19(8):1043-1048. doi: 10.1016/j.pan.2019.10.002. Epub 2019 Oct 10.

PMID:
31630918
19.

Correction: Understanding climate change from a global analysis of city analogues.

Bastin JF, Clark E, Elliott T, Hart S, van den Hoogen J, Hordijk I, Ma H, Majumder S, Manoli G, Maschler J, Mo L, Routh D, Yu K, Zohner CM, Crowther TW.

PLoS One. 2019 Oct 16;14(10):e0224120. doi: 10.1371/journal.pone.0224120. eCollection 2019.

20.

The impact of biochar on soil carbon sequestration: Meta-analytical approach to evaluating environmental and economic advantages.

Majumder S, Neogi S, Dutta T, Powel MA, Banik P.

J Environ Manage. 2019 Nov 15;250:109466. doi: 10.1016/j.jenvman.2019.109466. Epub 2019 Sep 2. Review.

PMID:
31487602
21.

Flower-Like MoS2 for Next-Generation High-Performance Energy Storage Device Applications.

Majumder S, Banerjee S.

Microsc Microanal. 2019 Dec;25(6):1394-1400. doi: 10.1017/S143192761901479X.

PMID:
31452487
22.

Bolt: a New Age Peptide Search Engine for Comprehensive MS/MS Sequencing Through Vast Protein Databases in Minutes.

Prakash A, Ahmad S, Majumder S, Jenkins C, Orsburn B.

J Am Soc Mass Spectrom. 2019 Nov;30(11):2408-2418. doi: 10.1007/s13361-019-02306-3. Epub 2019 Aug 26.

PMID:
31452088
23.

Detection and verification of 2.3 million cancer mutations in NCI60 cancer cell lines with a cloud search engine.

Prakash A, Majumder S, Ahmad S, Varkey M, Anish TA, Jenkins C, Rigby M, Orsburn B.

J Proteomics. 2019 Oct 30;209:103488. doi: 10.1016/j.jprot.2019.103488. Epub 2019 Aug 21.

PMID:
31445215
24.

Predicting the Time of Entry of Nanoparticles in Lipid Membranes.

Liu C, Elvati P, Majumder S, Wang Y, Liu AP, Violi A.

ACS Nano. 2019 Sep 24;13(9):10221-10232. doi: 10.1021/acsnano.9b03434. Epub 2019 Sep 13.

PMID:
31401835
25.

Dysregulated expression but redundant function of the long non-coding RNA HOTAIR in diabetic kidney disease.

Majumder S, Hadden MJ, Thieme K, Batchu SN, Niveditha D, Chowdhury S, Yerra VG, Advani SL, Bowskill BB, Liu Y, Vakili H, Alghamdi TA, White KE, Geldenhuys L, Siddiqi FS, Advani A.

Diabetologia. 2019 Nov;62(11):2129-2142. doi: 10.1007/s00125-019-4967-1. Epub 2019 Aug 9.

PMID:
31399844
26.

The Hedgehog Signaling Pathway: A Viable Target in Breast Cancer?

Bhateja P, Cherian M, Majumder S, Ramaswamy B.

Cancers (Basel). 2019 Aug 7;11(8). pii: E1126. doi: 10.3390/cancers11081126. Review.

27.

Assessment of the effect of urban pollution on surface water-groundwater system of Adi Ganga, a historical outlet of river Ganga.

Ghosh S, Majumder S, Roychowdhury T.

Chemosphere. 2019 Dec;237:124507. doi: 10.1016/j.chemosphere.2019.124507. Epub 2019 Aug 1.

PMID:
31394457
28.

Fluorescence photo-bleaching of urine and its applicability in oral cancer diagnosis.

Dutta SB, Krishna H, Gupta S, Majumder SK.

Photodiagnosis Photodyn Ther. 2019 Dec;28:18-24. doi: 10.1016/j.pdpdt.2019.08.007. Epub 2019 Aug 5.

PMID:
31394298
29.

Methylated DNA in Pancreatic Juice Distinguishes Patients With Pancreatic Cancer From Controls.

Majumder S, Raimondo M, Taylor WR, Yab TC, Berger CK, Dukek BA, Cao X, Foote PH, Wu CW, Devens ME, Mahoney DW, Smyrk TC, Pannala R, Chari ST, Vege SS, Topazian MD, Petersen BT, Levy MJ, Rajan E, Gleeson FC, Dayyeh BA, Nguyen CC, Faigel DO, Woodward TA, Wallace MB, Petersen G, Allawi HT, Lidgard GP, Kisiel JB, Ahlquist DA.

Clin Gastroenterol Hepatol. 2019 Jul 16. pii: S1542-3565(19)30750-5. doi: 10.1016/j.cgh.2019.07.017. [Epub ahead of print]

PMID:
31323382
30.

Abrupt involution induces inflammation, estrogenic signaling, and hyperplasia linking lack of breastfeeding with increased risk of breast cancer.

Basree MM, Shinde N, Koivisto C, Cuitino M, Kladney R, Zhang J, Stephens J, Palettas M, Zhang A, Kim HK, Acero-Bedoya S, Trimboli A, Stover DG, Ludwig T, Ganju R, Weng D, Shields P, Freudenheim J, Leone GW, Sizemore GM, Majumder S, Ramaswamy B.

Breast Cancer Res. 2019 Jul 17;21(1):80. doi: 10.1186/s13058-019-1163-7.

31.

An Adaptive Synthetic Cell Based on Mechanosensing, Biosensing, and Inducible Gene Circuits.

Garamella J, Majumder S, Liu AP, Noireaux V.

ACS Synth Biol. 2019 Aug 16;8(8):1913-1920. doi: 10.1021/acssynbio.9b00204. Epub 2019 Jul 25.

PMID:
31310519
32.

Novel Methylated DNA Markers Discriminate Advanced Neoplasia in Pancreatic Cysts: Marker Discovery, Tissue Validation, and Cyst Fluid Testing.

Majumder S, Taylor WR, Yab TC, Berger CK, Dukek BA, Cao X, Foote PH, Wu CW, Mahoney DW, Aslanian HR, Fernández-Del Castillo C, Doyle LA, Farrell JJ, Fisher WE, Lee LS, Lee YN, Park W, Rodrigues C, Gould Rothberg BE, Salem RR, Simeone DM, Urs S, Van Buren G, Smyrk TC, Allawi HT, Lidgard GP, Raimondo M, Chari ST, Kendrick ML, Kisiel JB, Topazian MD, Ahlquist DA.

Am J Gastroenterol. 2019 Sep;114(9):1539-1549. doi: 10.14309/ajg.0000000000000284.

PMID:
31306149
33.

Understanding climate change from a global analysis of city analogues.

Bastin JF, Clark E, Elliott T, Hart S, van den Hoogen J, Hordijk I, Ma H, Majumder S, Manoli G, Maschler J, Mo L, Routh D, Yu K, Zohner CM, Crowther TW.

PLoS One. 2019 Jul 10;14(7):e0217592. doi: 10.1371/journal.pone.0217592. eCollection 2019. Erratum in: PLoS One. 2019 Oct 16;14(10):e0224120.

34.

Utility of High Resolution NMR Methods to Probe the Impact of Chemical Modifications on Higher Order Structure of Monoclonal Antibodies in Relation to Antigen Binding.

Majumder S, Saati A, Philip S, Liu LL, Stephens E, Rouse JC, Alphonse Ignatius A.

Pharm Res. 2019 Jul 1;36(9):130. doi: 10.1007/s11095-019-2652-1.

PMID:
31264003
35.

Inverse spatially-offset Raman spectroscopy using optical fibers: An axicon lens-free approach.

Khan KM, Dutta SB, Kumar N, Dalal A, Srivastava A, Krishna H, Majumder SK.

J Biophotonics. 2019 Nov;12(11):e201900140. doi: 10.1002/jbio.201900140. Epub 2019 Jul 17.

PMID:
31215767
36.

Monitoring Methods of Human Body Joints: State-of-the-Art and Research Challenges.

Faisal AI, Majumder S, Mondal T, Cowan D, Naseh S, Deen MJ.

Sensors (Basel). 2019 Jun 10;19(11). pii: E2629. doi: 10.3390/s19112629. Review.

37.

The first complete genome sequence of garlic common latent virus occurring in India.

Yadav V, Majumder S.

Virusdisease. 2019 Jun;30(2):311-314. doi: 10.1007/s13337-018-0505-x. Epub 2019 Jan 5.

PMID:
31179372
38.

Aging phenomena during phase separation in fluids: decay of autocorrelation for vapor-liquid transitions.

Roy S, Bera A, Majumder S, Das SK.

Soft Matter. 2019 Jun 12;15(23):4743-4750. doi: 10.1039/c9sm00366e.

PMID:
31149698
39.

Correction: A synthetic biology platform for the reconstitution and mechanistic dissection of LINC complex assembly (doi:10.1242/jcs.219451).

Majumder S, Willey PT, DeNies MS, Liu AP, Luxton GWG.

J Cell Sci. 2019 May 17;132(10). pii: jcs234153. doi: 10.1242/jcs.234153. No abstract available.

40.

Hydrogen sulphide mitigates homocysteine-induced apoptosis and matrix remodelling in mesangial cells through Akt/FOXO1 signalling cascade.

Majumder S, Ren L, Pushpakumar S, Sen U.

Cell Signal. 2019 Sep;61:66-77. doi: 10.1016/j.cellsig.2019.05.003. Epub 2019 May 11.

PMID:
31085234
41.

Smartphone Sensors for Health Monitoring and Diagnosis.

Majumder S, Deen MJ.

Sensors (Basel). 2019 May 9;19(9). pii: E2164. doi: 10.3390/s19092164. Review.

42.

Inferring critical thresholds of ecosystem transitions from spatial data.

Majumder S, Tamma K, Ramaswamy S, Guttal V.

Ecology. 2019 Jul;100(7):e02722. doi: 10.1002/ecy.2722. Epub 2019 May 3.

PMID:
31051050
43.

Hyperphosphorylation of CDH1 in Glioblastoma Cancer Stem Cells Attenuates APC/CCDH1 Activity and Pharmacologic Inhibition of APC/CCDH1/CDC20 Compromises Viability.

De K, Grubb TM, Zalenski AA, Pfaff KE, Pal D, Majumder S, Summers MK, Venere M.

Mol Cancer Res. 2019 Jul;17(7):1519-1530. doi: 10.1158/1541-7786.MCR-18-1361. Epub 2019 Apr 29.

PMID:
31036696
44.

In search of suitable extraction technique for large scale commercial production of bioactive fraction for the treatment of diabetes: The case Diospyros melanoxylon Roxb.

Harun Al Rashid M, Majumder S, Mandal V, Mandal SC, Thandavarayan RA.

J Tradit Complement Med. 2018 Apr 30;9(2):106-118. doi: 10.1016/j.jtcme.2017.11.003. eCollection 2019 Apr.

45.

IL-17 metabolically reprograms activated fibroblastic reticular cells for proliferation and survival.

Majumder S, Amatya N, Revu S, Jawale CV, Wu D, Rittenhouse N, Menk A, Kupul S, Du F, Raphael I, Bhattacharjee A, Siebenlist U, Hand TW, Delgoffe GM, Poholek AC, Gaffen SL, Biswas PS, McGeachy MJ.

Nat Immunol. 2019 May;20(5):534-545. doi: 10.1038/s41590-019-0367-4. Epub 2019 Apr 8.

46.

REST-DRD2 mechanism impacts glioblastoma stem cell-mediated tumorigenesis.

Marisetty AL, Lu L, Veo BL, Liu B, Coarfa C, Kamal MM, Kassem DH, Irshad K, Lu Y, Gumin J, Henry V, Paulucci-Holthauzen A, Rao G, Baladandayuthapani V, Lang FF, Fuller GN, Majumder S.

Neuro Oncol. 2019 Jun 10;21(6):775-785. doi: 10.1093/neuonc/noz030.

PMID:
30953587
47.

A Bivalent Protein r-PAbxpB Comprising PA Domain IV and Exosporium Protein BxpB Confers Protection Against B. anthracis Spores and Toxin.

Majumder S, Das S, Somani VK, Makam SS, Kingston JJ, Bhatnagar R.

Front Immunol. 2019 Mar 19;10:498. doi: 10.3389/fimmu.2019.00498. eCollection 2019.

48.

A sandwich duplex immuno PCR for rapid and sensitive identification of Clostridium perfringens alpha and enterotoxin.

Das S, Majumder S, Nag M, Kingston JJ.

Anaerobe. 2019 Jun;57:63-74. doi: 10.1016/j.anaerobe.2019.03.015. Epub 2019 Mar 26.

PMID:
30922886
49.

Nitric Oxide Reverses the Position of the Heart during Embryonic Development.

Siamwala JH, Kumar P, Veeriah V, Muley A, Rajendran S, Konikkat S, Majumder S, Mani KP, Chatterjee S.

Int J Mol Sci. 2019 Mar 7;20(5). pii: E1157. doi: 10.3390/ijms20051157.

50.

Factors Affecting Diffuse Axonal Injury under Blunt Impact and Proposal for a Head Injury Criteria: A Finite Element Analysis.

Sarkar S, Majumder S, Roychowdhury A.

Crit Rev Biomed Eng. 2018;46(4):289-310. doi: 10.1615/CritRevBiomedEng.2018027249. Review.

PMID:
30806247

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