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Items: 1 to 50 of 65

1.

Learning optimal decisions with confidence.

Drugowitsch J, Mendonça AG, Mainen ZF, Pouget A.

Proc Natl Acad Sci U S A. 2019 Dec 3;116(49):24872-24880. doi: 10.1073/pnas.1906787116. Epub 2019 Nov 15.

PMID:
31732671
2.

The mechanistic foundation of Weber's law.

Pardo-Vazquez JL, Castiñeiras-de Saa JR, Valente M, Damião I, Costa T, Vicente MI, Mendonça AG, Mainen ZF, Renart A.

Nat Neurosci. 2019 Sep;22(9):1493-1502. doi: 10.1038/s41593-019-0439-7. Epub 2019 Aug 12.

PMID:
31406366
3.

An effect of serotonergic stimulation on learning rates for rewards apparent after long intertrial intervals.

Iigaya K, Fonseca MS, Murakami M, Mainen ZF, Dayan P.

Nat Commun. 2018 Jun 26;9(1):2477. doi: 10.1038/s41467-018-04840-2.

4.

Activation of serotonin neurons promotes active persistence in a probabilistic foraging task.

Lottem E, Banerjee D, Vertechi P, Sarra D, Lohuis MO, Mainen ZF.

Nat Commun. 2018 Mar 8;9(1):1000. doi: 10.1038/s41467-018-03438-y.

5.

Stereotaxic Adeno-associated Virus Injection and Cannula Implantation in the Dorsal Raphe Nucleus of Mice.

Correia PA, Matias S, Mainen ZF.

Bio Protoc. 2017 Sep 20;7(18):e2549. doi: 10.21769/BioProtoc.2549.

6.

Distinct Sources of Deterministic and Stochastic Components of Action Timing Decisions in Rodent Frontal Cortex.

Murakami M, Shteingart H, Loewenstein Y, Mainen ZF.

Neuron. 2017 May 17;94(4):908-919.e7. doi: 10.1016/j.neuron.2017.04.040.

7.

Activity patterns of serotonin neurons underlying cognitive flexibility.

Matias S, Lottem E, Dugué GP, Mainen ZF.

Elife. 2017 Mar 21;6. pii: e20552. doi: 10.7554/eLife.20552.

8.

Transient inhibition and long-term facilitation of locomotion by phasic optogenetic activation of serotonin neurons.

Correia PA, Lottem E, Banerjee D, Machado AS, Carey MR, Mainen ZF.

Elife. 2017 Feb 14;6. pii: e20975. doi: 10.7554/eLife.20975.

9.

A probabilistic approach to demixing odors.

Grabska-Barwińska A, Barthelmé S, Beck J, Mainen ZF, Pouget A, Latham PE.

Nat Neurosci. 2017 Jan;20(1):98-106. doi: 10.1038/nn.4444. Epub 2016 Dec 5.

PMID:
27918530
10.

A better way to crack the brain.

Mainen ZF, Häusser M, Pouget A.

Nature. 2016 Nov 10;539(7628):159-161. doi: 10.1038/539159a. No abstract available.

PMID:
27830818
11.

Demixed principal component analysis of neural population data.

Kobak D, Brendel W, Constantinidis C, Feierstein CE, Kepecs A, Mainen ZF, Qi XL, Romo R, Uchida N, Machens CK.

Elife. 2016 Apr 12;5. pii: e10989. doi: 10.7554/eLife.10989.

12.

Expanding perspectives on cognition in humans, animals, and machines.

Gomez-Marin A, Mainen ZF.

Curr Opin Neurobiol. 2016 Apr;37:85-91. doi: 10.1016/j.conb.2016.01.011. Epub 2016 Feb 8. Review.

PMID:
26868042
13.

Optogenetic Activation of Dorsal Raphe Serotonin Neurons Rapidly Inhibits Spontaneous But Not Odor-Evoked Activity in Olfactory Cortex.

Lottem E, Lörincz ML, Mainen ZF.

J Neurosci. 2016 Jan 6;36(1):7-18. doi: 10.1523/JNEUROSCI.3008-15.2016.

14.

Confidence as Bayesian Probability: From Neural Origins to Behavior.

Meyniel F, Sigman M, Mainen ZF.

Neuron. 2015 Oct 7;88(1):78-92. doi: 10.1016/j.neuron.2015.09.039. Review.

15.

Columnar architecture improves noise robustness in a model cortical network.

Bush PC, Mainen ZF.

PLoS One. 2015 Mar 17;10(3):e0119072. doi: 10.1371/journal.pone.0119072. eCollection 2015.

16.

Spontaneous Decisions and Free Will: Empirical Results and Philosophical Considerations.

Rigato J, Murakami M, Mainen Z.

Cold Spring Harb Symp Quant Biol. 2014;79:177-84. doi: 10.1101/sqb.2014.79.024810. Epub 2015 Mar 6. Review.

PMID:
25746063
17.

Preparing and selecting actions with neural populations: toward cortical circuit mechanisms.

Murakami M, Mainen ZF.

Curr Opin Neurobiol. 2015 Aug;33:40-6. doi: 10.1016/j.conb.2015.01.005. Epub 2015 Feb 3. Review.

18.

Activation of dorsal raphe serotonergic neurons promotes waiting but is not reinforcing.

Fonseca MS, Murakami M, Mainen ZF.

Curr Biol. 2015 Feb 2;25(3):306-315. doi: 10.1016/j.cub.2014.12.002. Epub 2015 Jan 15.

19.

Big behavioral data: psychology, ethology and the foundations of neuroscience.

Gomez-Marin A, Paton JJ, Kampff AR, Costa RM, Mainen ZF.

Nat Neurosci. 2014 Nov;17(11):1455-62. doi: 10.1038/nn.3812. Epub 2014 Oct 28. Review.

PMID:
25349912
20.

Neural antecedents of self-initiated actions in secondary motor cortex.

Murakami M, Vicente MI, Costa GM, Mainen ZF.

Nat Neurosci. 2014 Nov;17(11):1574-82. doi: 10.1038/nn.3826. Epub 2014 Sep 28.

PMID:
25262496
21.

Orbitofrontal cortex is required for optimal waiting based on decision confidence.

Lak A, Costa GM, Romberg E, Koulakov AA, Mainen ZF, Kepecs A.

Neuron. 2014 Oct 1;84(1):190-201. doi: 10.1016/j.neuron.2014.08.039. Epub 2014 Sep 18.

22.

Optogenetic recruitment of dorsal raphe serotonergic neurons acutely decreases mechanosensory responsivity in behaving mice.

Dugué GP, Lörincz ML, Lottem E, Audero E, Matias S, Correia PA, Léna C, Mainen ZF.

PLoS One. 2014 Aug 22;9(8):e105941. doi: 10.1371/journal.pone.0105941. eCollection 2014.

23.

European Commission: Put brain project back on course.

Mainen ZF, Pouget A.

Nature. 2014 Jul 31;511(7511):534. doi: 10.1038/511534b. No abstract available.

PMID:
25079543
24.

Balanced activity in basal ganglia projection pathways is critical for contraversive movements.

Tecuapetla F, Matias S, Dugue GP, Mainen ZF, Costa RM.

Nat Commun. 2014 Jul 8;5:4315. doi: 10.1038/ncomms5315.

25.

Social cognition in the rodent: nothing to be sniffed at.

Rennie SM, Moita MM, Mainen ZF.

Trends Cogn Sci. 2013 Jul;17(7):306-7. doi: 10.1016/j.tics.2013.04.011. Epub 2013 May 7.

PMID:
23664453
26.

The limits of deliberation in a perceptual decision task.

Zariwala HA, Kepecs A, Uchida N, Hirokawa J, Mainen ZF.

Neuron. 2013 Apr 24;78(2):339-51. doi: 10.1016/j.neuron.2013.02.010. Epub 2013 Mar 28.

27.

Odor representations in olfactory cortex: distributed rate coding and decorrelated population activity.

Miura K, Mainen ZF, Uchida N.

Neuron. 2012 Jun 21;74(6):1087-98. doi: 10.1016/j.neuron.2012.04.021.

28.

Midbrain contributions to sensorimotor decision making.

Felsen G, Mainen ZF.

J Neurophysiol. 2012 Jul;108(1):135-47. doi: 10.1152/jn.01181.2011. Epub 2012 Apr 11.

29.

A computational framework for the study of confidence in humans and animals.

Kepecs A, Mainen ZF.

Philos Trans R Soc Lond B Biol Sci. 2012 May 19;367(1594):1322-37. doi: 10.1098/rstb.2012.0037. Review.

30.

Convergence in the piriform cortex.

Vicente MI, Mainen ZF.

Neuron. 2011 Apr 14;70(1):1-2. doi: 10.1016/j.neuron.2011.03.019.

31.

Listening to the crowd: neuronal ensembles rule.

Feierstein CE, Mainen ZF.

Neuron. 2010 May 13;66(3):334-6. doi: 10.1016/j.neuron.2010.04.042.

32.

A defined network of fast-spiking interneurons in orbitofrontal cortex: responses to behavioral contingencies and ketamine administration.

Quirk MC, Sosulski DL, Feierstein CE, Uchida N, Mainen ZF.

Front Syst Neurosci. 2009 Nov 3;3:13. doi: 10.3389/neuro.06.013.2009. eCollection 2009.

33.

Transient firing of dorsal raphe neurons encodes diverse and specific sensory, motor, and reward events.

Ranade SP, Mainen ZF.

J Neurophysiol. 2009 Nov;102(5):3026-37. doi: 10.1152/jn.00507.2009. Epub 2009 Aug 26.

34.

How serotonin gates olfactory information flow.

Dugué GP, Mainen ZF.

Nat Neurosci. 2009 Jun;12(6):673-5. doi: 10.1038/nn0609-673. No abstract available.

PMID:
19471262
35.

Neural representation of behavioral outcomes in the orbitofrontal cortex.

Mainen ZF, Kepecs A.

Curr Opin Neurobiol. 2009 Feb;19(1):84-91. doi: 10.1016/j.conb.2009.03.010. Epub 2009 May 6. Review.

PMID:
19427193
36.

Towards an image of a memory trace.

Vicente MI, Mainen ZF.

Front Neurosci. 2008 Dec 15;2(2):131-2. doi: 10.3389/neuro.01.041.2008. eCollection 2008 Dec. No abstract available.

37.

Odor concentration invariance by chemical ratio coding.

Uchida N, Mainen ZF.

Front Syst Neurosci. 2008 Apr 8;1:3. doi: 10.3389/neuro.06.003.2007. eCollection 2007.

38.

Neural substrates of sensory-guided locomotor decisions in the rat superior colliculus.

Felsen G, Mainen ZF.

Neuron. 2008 Oct 9;60(1):137-48. doi: 10.1016/j.neuron.2008.09.019.

39.

Neural correlates, computation and behavioural impact of decision confidence.

Kepecs A, Uchida N, Zariwala HA, Mainen ZF.

Nature. 2008 Sep 11;455(7210):227-31. doi: 10.1038/nature07200.

PMID:
18690210
40.

Sparse optical microstimulation in barrel cortex drives learned behaviour in freely moving mice.

Huber D, Petreanu L, Ghitani N, Ranade S, Hromádka T, Mainen Z, Svoboda K.

Nature. 2008 Jan 3;451(7174):61-4.

41.

The main olfactory bulb and innate behavior: different perspectives on an olfactory scene.

Mainen ZF.

Nat Neurosci. 2007 Dec;10(12):1511-2. No abstract available.

PMID:
18043586
42.

Low-power high-resolution 32-channel neural recording system.

Yun X, Kim D, Stanaćević M, Mainen Z.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:2373-6.

PMID:
18002470
43.

The functional microarchitecture of the mouse barrel cortex.

Sato TR, Gray NW, Mainen ZF, Svoboda K.

PLoS Biol. 2007 Jul;5(7):e189. Epub 2007 Jul 10.

44.

Rapid and precise control of sniffing during olfactory discrimination in rats.

Kepecs A, Uchida N, Mainen ZF.

J Neurophysiol. 2007 Jul;98(1):205-13. Epub 2007 Apr 25.

45.
46.

Representation of spatial goals in rat orbitofrontal cortex.

Feierstein CE, Quirk MC, Uchida N, Sosulski DL, Mainen ZF.

Neuron. 2006 Aug 17;51(4):495-507.

47.

Behavioral analysis of olfactory coding and computation in rodents.

Mainen ZF.

Curr Opin Neurobiol. 2006 Aug;16(4):429-34. Epub 2006 Jul 5. Review.

PMID:
16822662
48.

Early events in olfactory processing.

Wilson RI, Mainen ZF.

Annu Rev Neurosci. 2006;29:163-201. Review.

PMID:
16776583
49.

Seeing at a glance, smelling in a whiff: rapid forms of perceptual decision making.

Uchida N, Kepecs A, Mainen ZF.

Nat Rev Neurosci. 2006 Jun;7(6):485-91. Review.

PMID:
16715056
50.

The sniff as a unit of olfactory processing.

Kepecs A, Uchida N, Mainen ZF.

Chem Senses. 2006 Feb;31(2):167-79. Epub 2005 Dec 8. Review.

PMID:
16339265

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