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Items: 36

1.

Phytochrome A Regulates Carbon Flux in Dark Grown Tomato Seedlings.

Carlson KD, Bhogale S, Anderson D, Tomanek L, Madlung A.

Front Plant Sci. 2019 Feb 27;10:152. doi: 10.3389/fpls.2019.00152. eCollection 2019.

2.

Assessing an effective undergraduate module teaching applied bioinformatics to biology students.

Madlung A.

PLoS Comput Biol. 2018 Jan 11;14(1):e1005872. doi: 10.1371/journal.pcbi.1005872. eCollection 2018 Jan.

3.

Natural variation in stress response gene activity in the allopolyploid Arabidopsis suecica.

Carlson KD, Fernandez-Pozo N, Bombarely A, Pisupati R, Mueller LA, Madlung A.

BMC Genomics. 2017 Aug 23;18(1):653. doi: 10.1186/s12864-017-4067-x.

4.

Environmental Regulation of Heterosis in the Allopolyploid Arabidopsis suecica.

Solhaug EM, Ihinger J, Jost M, Gamboa V, Marchant B, Bradford D, Doerge RW, Tyagi A, Replogle A, Madlung A.

Plant Physiol. 2016 Apr;170(4):2251-63. doi: 10.1104/pp.16.00052. Epub 2016 Feb 19.

5.

Floral Reversion in Arabidopsis suecica Is Correlated with the Onset of Flowering and Meristem Transitioning.

Asbe A, Matsushita SC, Gordon S, Kirkpatrick HE, Madlung A.

PLoS One. 2015 May 26;10(5):e0127897. doi: 10.1371/journal.pone.0127897. eCollection 2015.

6.

Polyploidy in the Arabidopsis genus.

Bomblies K, Madlung A.

Chromosome Res. 2014 Jun;22(2):117-34. doi: 10.1007/s10577-014-9416-x. Review.

PMID:
24788061
7.

Genetic and epigenetic aspects of polyploid evolution in plants.

Madlung A, Wendel JF.

Cytogenet Genome Res. 2013;140(2-4):270-85. doi: 10.1159/000351430. Epub 2013 Jun 8. Review.

PMID:
23751292
8.

Polyploidy and its effect on evolutionary success: old questions revisited with new tools.

Madlung A.

Heredity (Edinb). 2013 Feb;110(2):99-104. doi: 10.1038/hdy.2012.79. Epub 2012 Nov 14. Review.

9.

Neoadjuvant chemoradiotherapy with or without panitumumab in patients with wild-type KRAS, locally advanced rectal cancer (LARC): a randomized, multicenter, phase II trial SAKK 41/07.

Helbling D, Bodoky G, Gautschi O, Sun H, Bosman F, Gloor B, Burkhard R, Winterhalder R, Madlung A, Rauch D, Saletti P, Widmer L, Borner M, Baertschi D, Yan P, Benhattar J, Leibundgut EO, Bougel S, Koeberle D.

Ann Oncol. 2013 Mar;24(3):718-25. doi: 10.1093/annonc/mds519. Epub 2012 Nov 8.

10.

Allopolyploidization lays the foundation for evolution of distinct populations: evidence from analysis of synthetic Arabidopsis allohexaploids.

Matsushita SC, Tyagi AP, Thornton GM, Pires JC, Madlung A.

Genetics. 2012 Jun;191(2):535-47. doi: 10.1534/genetics.112.139295. Epub 2012 Mar 16.

11.

Natural variation and persistent developmental instabilities in geographically diverse accessions of the allopolyploid Arabidopsis suecica.

Madlung A, Henkhaus N, Jurevic L, Kahsai EA, Bernhard J.

Physiol Plant. 2012 Feb;144(2):123-33. doi: 10.1111/j.1399-3054.2011.01526.x. Epub 2011 Nov 10.

PMID:
21939446
12.

A study assessing the potential of negative effects in interdisciplinary math-biology instruction.

Madlung A, Bremer M, Himelblau E, Tullis A.

CBE Life Sci Educ. 2011 Spring;10(1):43-54. doi: 10.1187/cbe.10-08-0102.

13.

Comparative risk-adjusted mortality outcomes after primary surgery, radiotherapy, or androgen-deprivation therapy for localized prostate cancer.

Madlung A, Simcock M, Ghadjar P.

Cancer. 2011 Aug 1;117(15):3532; author reply 3532-3. doi: 10.1002/cncr.25949. Epub 2011 Feb 1. No abstract available.

14.

High-dose (80 Gy) intensity-modulated radiation therapy with daily image-guidance as primary treatment for localized prostate cancer.

Ghadjar P, Gwerder N, Manser P, Vock J, Madlung A, Mini R, Aebersold DM.

Strahlenther Onkol. 2010 Dec;186(12):687-92. doi: 10.1007/s00066-010-2180-8. Epub 2010 Nov 30.

15.

Introduction to the statistical analysis of two-color microarray data.

Bremer M, Himelblau E, Madlung A.

Methods Mol Biol. 2010;620:287-313. doi: 10.1007/978-1-60761-580-4_9.

PMID:
20652509
16.

Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling.

Pignatta D, Dilkes BP, Yoo SY, Henry IM, Madlung A, Doerge RW, Jeffrey Chen Z, Comai L.

New Phytol. 2010 Apr;186(1):194-206. doi: 10.1111/j.1469-8137.2010.03198.x.

17.

Photoperiod-dependent floral reversion in the natural allopolyploid Arabidopsis suecica.

McCullough E, Wright KM, Alvarez A, Clark CP, Rickoll WL, Madlung A.

New Phytol. 2010 Apr;186(1):239-50. doi: 10.1111/j.1469-8137.2009.03141.x. Epub 2010 Jan 13.

18.

Use of gold markers for setup in image-guided fractionated high-dose-rate brachytherapy as a monotherapy for prostate cancer.

Ghadjar P, Gwerder N, Madlung A, Behrensmeier F, Thalmann GN, Mini R, Aebersold DM.

Strahlenther Onkol. 2009 Nov;185(11):731-5. doi: 10.1007/s00066-009-2007-7. Epub 2009 Nov 10.

19.

Mitotic instability in resynthesized and natural polyploids of the genus Arabidopsis (Brassicaceae).

Wright KM, Pires JC, Madlung A.

Am J Bot. 2009 Sep;96(9):1656-64. doi: 10.3732/ajb.0800270. Epub 2009 Aug 13.

20.

Acute and late toxicity in prostate cancer patients treated by dose escalated intensity modulated radiation therapy and organ tracking.

Ghadjar P, Vock J, Vetterli D, Manser P, Bigler R, Tille J, Madlung A, Behrensmeier F, Mini R, Aebersold DM.

Radiat Oncol. 2008 Oct 20;3:35. doi: 10.1186/1748-717X-3-35.

21.

The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects.

Jeffrey Chen Z, Wang J, Tian L, Lee HS, Wang JJ, Chen M, Lee JJ, Josefsson C, Madlung A, Watson B, Lippman Z, Vaughn M, Chris Pires J, Colot V, Doerge RW, Martienssen RA, Comai L, Osborn TC.

Biol J Linn Soc Lond. 2004 Aug;82(4):689-700.

22.

Sensitivity of 70-mer oligonucleotides and cDNAs for microarray analysis of gene expression in Arabidopsis and its related species.

Lee HS, Wang J, Tian L, Jiang H, Black MA, Madlung A, Watson B, Lukens L, Pires JC, Wang JJ, Comai L, Osborn TC, Doerge RW, Chen ZJ.

Plant Biotechnol J. 2004 Jan;2(1):45-57.

23.

Genomewide nonadditive gene regulation in Arabidopsis allotetraploids.

Wang J, Tian L, Lee HS, Wei NE, Jiang H, Watson B, Madlung A, Osborn TC, Doerge RW, Comai L, Chen ZJ.

Genetics. 2006 Jan;172(1):507-17. Epub 2005 Sep 19.

24.

Genomic changes in synthetic Arabidopsis polyploids.

Madlung A, Tyagi AP, Watson B, Jiang H, Kagochi T, Doerge RW, Martienssen R, Comai L.

Plant J. 2005 Jan;41(2):221-30.

25.

Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome.

Pontes O, Neves N, Silva M, Lewis MS, Madlung A, Comai L, Viegas W, Pikaard CS.

Proc Natl Acad Sci U S A. 2004 Dec 28;101(52):18240-5. Epub 2004 Dec 16.

26.

Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids.

Wang J, Tian L, Madlung A, Lee HS, Chen M, Lee JJ, Watson B, Kagochi T, Comai L, Chen ZJ.

Genetics. 2004 Aug;167(4):1961-73.

27.

The effect of stress on genome regulation and structure.

Madlung A, Comai L.

Ann Bot. 2004 Oct;94(4):481-95. Epub 2004 Aug 19. Review.

28.

Do the different parental 'heteromes' cause genomic shock in newly formed allopolyploids?

Comai L, Madlung A, Josefsson C, Tyagi A.

Philos Trans R Soc Lond B Biol Sci. 2003 Jun 29;358(1434):1149-55.

29.

Understanding mechanisms of novel gene expression in polyploids.

Osborn TC, Pires JC, Birchler JA, Auger DL, Chen ZJ, Lee HS, Comai L, Madlung A, Doerge RW, Colot V, Martienssen RA.

Trends Genet. 2003 Mar;19(3):141-7. Review.

PMID:
12615008
30.

Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids.

Madlung A, Masuelli RW, Watson B, Reynolds SH, Davison J, Comai L.

Plant Physiol. 2002 Jun;129(2):733-46.

31.

Function of PrP(C) as a copper-binding protein at the synapse.

Kretzschmar HA, Tings T, Madlung A, Giese A, Herms J.

Arch Virol Suppl. 2000;(16):239-49. Review.

PMID:
11214928
32.

Prion protein as copper-binding protein at the synapse.

Kretzschmar HA, Tings T, Madlung A, Giese A, Herms J.

Methods Mol Med. 2001;59:17-30. doi: 10.1385/1-59259-134-5:17.

PMID:
21374496
33.

Evidence of presynaptic location and function of the prion protein.

Herms J, Tings T, Gall S, Madlung A, Giese A, Siebert H, Schürmann P, Windl O, Brose N, Kretzschmar H.

J Neurosci. 1999 Oct 15;19(20):8866-75.

34.

Ethylene plays multiple nonprimary roles in modulating the gravitropic response in tomato.

Madlung A, Behringer FJ, Lomax TL.

Plant Physiol. 1999 Jul;120(3):897-906.

35.

The cellular prion protein binds copper in vivo.

Brown DR, Qin K, Herms JW, Madlung A, Manson J, Strome R, Fraser PE, Kruck T, von Bohlen A, Schulz-Schaeffer W, Giese A, Westaway D, Kretzschmar H.

Nature. 1997 Dec 18-25;390(6661):684-7.

PMID:
9414160
36.

Increase of intracellular free Ca2+ in microglia activated by prion protein fragment.

Herms JW, Madlung A, Brown DR, Kretzschmar HA.

Glia. 1997 Oct;21(2):253-7.

PMID:
9336239

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