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Items: 45

1.

Structural basis of UCUU RNA motif recognition by splicing factor RBM20.

Upadhyay SK, Mackereth CD.

Nucleic Acids Res. 2020 Mar 18. pii: gkaa168. doi: 10.1093/nar/gkaa168. [Epub ahead of print]

PMID:
32187365
2.

Allosteric Recognition of Homomeric and Heteromeric Pairs of Monosaccharides by a Foldamer Capsule.

Mateus P, Chandramouli N, Mackereth CD, Kauffmann B, Ferrand Y, Huc I.

Angew Chem Int Ed Engl. 2020 Mar 27;59(14):5797-5805. doi: 10.1002/anie.201914929. Epub 2020 Feb 3.

PMID:
31863707
3.

Engineering selective competitors for the discrimination of highly conserved protein-protein interaction modules.

Rimbault C, Maruthi K, Breillat C, Genuer C, Crespillo S, Puente-Muñoz V, Chamma I, Gauthereau I, Antoine S, Thibaut C, Tai FWJ, Dartigues B, Grillo-Bosch D, Claverol S, Poujol C, Choquet D, Mackereth CD, Sainlos M.

Nat Commun. 2019 Oct 4;10(1):4521. doi: 10.1038/s41467-019-12528-4.

4.

Biophysical Insight on the Membrane Insertion of an Arginine-Rich Cell-Penetrating Peptide.

Jobin ML, Vamparys L, Deniau R, Grélard A, Mackereth CD, Fuchs PFJ, Alves ID.

Int J Mol Sci. 2019 Sep 9;20(18). pii: E4441. doi: 10.3390/ijms20184441.

5.

Structure Elucidation of Helical Aromatic Foldamer-Protein Complexes with Large Contact Surface Areas.

Reddy PS, Langlois d'Estaintot B, Granier T, Mackereth CD, Fischer L, Huc I.

Chemistry. 2019 Aug 22;25(47):11042-11047. doi: 10.1002/chem.201902942. Epub 2019 Jul 30.

PMID:
31257622
6.

Assessing Interactions between Helical Aromatic Oligoamide Foldamers and Protein Surfaces: A Tethering Approach.

Vallade M, Jewginski M, Fischer L, Buratto J, Bathany K, Schmitter JM, Stupfel M, Godde F, Mackereth CD, Huc I.

Bioconjug Chem. 2019 Jan 16;30(1):54-62. doi: 10.1021/acs.bioconjchem.8b00710. Epub 2018 Nov 19.

PMID:
30395443
7.

The basic tilted helix bundle domain of the prolyl isomerase FKBP25 is a novel double-stranded RNA binding module.

Dilworth D, Upadhyay SK, Bonnafous P, Edoo AB, Bourbigot S, Pesek-Jardim F, Gudavicius G, Serpa JJ, Petrotchenko EV, Borchers CH, Nelson CJ, Mackereth CD.

Nucleic Acids Res. 2017 Nov 16;45(20):11989-12004. doi: 10.1093/nar/gkx852.

8.

Distinct roles of Pcf11 zinc-binding domains in pre-mRNA 3'-end processing.

Guéguéniat J, Dupin AF, Stojko J, Beaurepaire L, Cianférani S, Mackereth CD, Minvielle-Sébastia L, Fribourg S.

Nucleic Acids Res. 2017 Sep 29;45(17):10115-10131. doi: 10.1093/nar/gkx674.

9.

Basic surface features of nuclear FKBPs facilitate chromatin binding.

Leung A, Jardim FP, Savic N, Monneau YR, González-Romero R, Gudavicius G, Eirin-Lopez JM, Bartke T, Mackereth CD, Ausió J, Nelson CJ.

Sci Rep. 2017 Jun 19;7(1):3795. doi: 10.1038/s41598-017-04194-7.

10.

Molecular Recognition within the Cavity of a Foldamer Helix Bundle: Encapsulation of Primary Alcohols in Aqueous Conditions.

Collie GW, Bailly R, Pulka-Ziach K, Lombardo CM, Mauran L, Taib-Maamar N, Dessolin J, Mackereth CD, Guichard G.

J Am Chem Soc. 2017 May 3;139(17):6128-6137. doi: 10.1021/jacs.7b00181. Epub 2017 Mar 15.

PMID:
28234005
11.

Self-Assembled Protein-Aromatic Foldamer Complexes with 2:3 and 2:2:1 Stoichiometries.

Jewginski M, Granier T, Langlois d'Estaintot B, Fischer L, Mackereth CD, Huc I.

J Am Chem Soc. 2017 Mar 1;139(8):2928-2931. doi: 10.1021/jacs.7b00184. Epub 2017 Feb 14.

PMID:
28170240
12.

Conserved binding of GCAC motifs by MEC-8, couch potato, and the RBPMS protein family.

Soufari H, Mackereth CD.

RNA. 2017 Mar;23(3):308-316. doi: 10.1261/rna.059733.116. Epub 2016 Dec 21.

13.

Anatomy of an Oligourea Six-Helix Bundle.

Lombardo CM, Collie GW, Pulka-Ziach K, Rosu F, Gabelica V, Mackereth CD, Guichard G.

J Am Chem Soc. 2016 Aug 24;138(33):10522-30. doi: 10.1021/jacs.6b05063. Epub 2016 Aug 15.

PMID:
27434817
14.

(1)H, (15)N and (13)C backbone and side chain resonance assignments of the RRM domain from human RBM24.

Upadhyay SK, Mackereth CD.

Biomol NMR Assign. 2016 Oct;10(2):237-40. doi: 10.1007/s12104-016-9674-y. Epub 2016 Mar 22.

PMID:
27002326
15.

Solution Observation of Dimerization and Helix Handedness Induction in a Human Carbonic Anhydrase-Helical Aromatic Amide Foldamer Complex.

Jewginski M, Fischer L, Colombo C, Huc I, Mackereth CD.

Chembiochem. 2016 Apr 15;17(8):727-36. doi: 10.1002/cbic.201500619. Epub 2016 Mar 4.

PMID:
26807531
16.

Shaping quaternary assemblies of water-soluble non-peptide helical foldamers by sequence manipulation.

Collie GW, Pulka-Ziach K, Lombardo CM, Fremaux J, Rosu F, Decossas M, Mauran L, Lambert O, Gabelica V, Mackereth CD, Guichard G.

Nat Chem. 2015 Nov;7(11):871-8. doi: 10.1038/nchem.2353. Epub 2015 Sep 28.

PMID:
26492006
17.

Splicing factor SUP-12 and the molecular complexity of apparent cooperativity.

Mackereth CD.

Worm. 2015 Jan 30;3(4):e991240. doi: 10.4161/21624054.2014.991240. eCollection 2014 Oct-Dec.

18.

Chemical shift assignments of a new folded domain from yeast Pcf11.

Xu X, Pérébaskine N, Minvielle-Sébastia L, Fribourg S, Mackereth CD.

Biomol NMR Assign. 2015 Oct;9(2):421-5. doi: 10.1007/s12104-015-9622-2. Epub 2015 Jul 2.

PMID:
26133941
19.

Structural Analysis of Protein-RNA Complexes in Solution Using NMR Paramagnetic Relaxation Enhancements.

Hennig J, Warner LR, Simon B, Geerlof A, Mackereth CD, Sattler M.

Methods Enzymol. 2015;558:333-362. doi: 10.1016/bs.mie.2015.02.006. Epub 2015 Mar 26.

PMID:
26068746
20.

Iterative design of a helically folded aromatic oligoamide sequence for the selective encapsulation of fructose.

Chandramouli N, Ferrand Y, Lautrette G, Kauffmann B, Mackereth CD, Laguerre M, Dubreuil D, Huc I.

Nat Chem. 2015 Apr;7(4):334-41. doi: 10.1038/nchem.2195. Epub 2015 Mar 16.

PMID:
25803472
21.

Backbone-independent nucleic acid binding by splicing factor SUP-12 reveals key aspects of molecular recognition.

Amrane S, Rebora K, Zniber I, Dupuy D, Mackereth CD.

Nat Commun. 2014 Sep 3;5:4595. doi: 10.1038/ncomms5595.

PMID:
25183497
22.

Transient electrostatic interactions dominate the conformational equilibrium sampled by multidomain splicing factor U2AF65: a combined NMR and SAXS study.

Huang JR, Warner LR, Sanchez C, Gabel F, Madl T, Mackereth CD, Sattler M, Blackledge M.

J Am Chem Soc. 2014 May 14;136(19):7068-76. doi: 10.1021/ja502030n. Epub 2014 Apr 29.

PMID:
24734879
23.

Structure and activity of the peptidyl-prolyl isomerase domain from the histone chaperone Fpr4 toward histone H3 proline isomerization.

Monneau YR, Soufari H, Nelson CJ, Mackereth CD.

J Biol Chem. 2013 Sep 6;288(36):25826-37. doi: 10.1074/jbc.M113.479964. Epub 2013 Jul 25.

24.

Resolving the functions of peptidylprolyl isomerases: insights from the mutagenesis of the nuclear FKBP25 enzyme.

Gudavicius G, Soufari H, Upadhyay SK, Mackereth CD, Nelson CJ.

Biochem Soc Trans. 2013 Jun;41(3):761-8. doi: 10.1042/BST20130013. Review. Erratum in: Biochem Soc Trans. 2013 Aug;41(4):1101. Upadhyay, Santosh [corrected to Upadhyay, Santosh Kumar].

PMID:
23697935
25.

Protein chemical shift assignments of the unbound and RNA-bound forms of the alternative splicing factor SUP-12 from C. elegans.

Amrane S, Mackereth CD.

Biomol NMR Assign. 2014 Apr;8(1):109-12. doi: 10.1007/s12104-013-9463-9. Epub 2013 Jan 20.

PMID:
23334698
26.

Dynamics in multi-domain protein recognition of RNA.

Mackereth CD, Sattler M.

Curr Opin Struct Biol. 2012 Jun;22(3):287-96. doi: 10.1016/j.sbi.2012.03.013. Epub 2012 Apr 18. Review.

PMID:
22516180
27.

Chemical shift assignments of the catalytic domain from the yeast proline isomerase Fpr4p.

Monneau YR, Nelson CJ, Mackereth CD.

Biomol NMR Assign. 2012 Oct;6(2):123-6. doi: 10.1007/s12104-011-9338-x. Epub 2011 Sep 7.

PMID:
21898050
28.

Multi-domain conformational selection underlies pre-mRNA splicing regulation by U2AF.

Mackereth CD, Madl T, Bonnal S, Simon B, Zanier K, Gasch A, Rybin V, Valcárcel J, Sattler M.

Nature. 2011 Jul 13;475(7356):408-11. doi: 10.1038/nature10171.

PMID:
21753750
29.

Locked tether formation by cooperative folding of Rna14p monkeytail and Rna15p hinge domains in the yeast CF IA complex.

Moreno-Morcillo M, Minvielle-Sébastia L, Fribourg S, Mackereth CD.

Structure. 2011 Apr 13;19(4):534-45. doi: 10.1016/j.str.2011.02.003.

30.

Chemical shift assignments of a minimal Rna14p/Rna15p heterodimer from the yeast cleavage factor IA complex.

Mackereth CD.

Biomol NMR Assign. 2011 Apr;5(1):93-5. doi: 10.1007/s12104-010-9275-0. Epub 2010 Oct 22.

PMID:
20967574
31.

Structure and RNA recognition by the snRNA and snoRNA transport factor PHAX.

Mourão A, Varrot A, Mackereth CD, Cusack S, Sattler M.

RNA. 2010 Jun;16(6):1205-16. doi: 10.1261/rna.2009910. Epub 2010 Apr 29.

32.

An efficient protocol for NMR-spectroscopy-based structure determination of protein complexes in solution.

Simon B, Madl T, Mackereth CD, Nilges M, Sattler M.

Angew Chem Int Ed Engl. 2010 Mar 8;49(11):1967-70. doi: 10.1002/anie.200906147. No abstract available.

PMID:
20148424
33.

Identification and structural characterization of a CBP/p300-binding domain from the ETS family transcription factor GABP alpha.

Kang HS, Nelson ML, Mackereth CD, Schärpf M, Graves BJ, McIntosh LP.

J Mol Biol. 2008 Mar 28;377(3):636-46. doi: 10.1016/j.jmb.2008.01.054. Epub 2008 Jan 30.

34.

Beads-on-a-string, characterization of ETS-1 sumoylated within its flexible N-terminal sequence.

Macauley MS, Errington WJ, Schärpf M, Mackereth CD, Blaszczak AG, Graves BJ, McIntosh LP.

J Biol Chem. 2006 Feb 17;281(7):4164-72. Epub 2005 Nov 29.

35.

NMR Assignment Reveals an alpha-Helical Fold for the F-Actin Binding Domain of Human Bcr-Abl/c-Abl.

Wiesner S, Hantschel O, Mackereth CD, Superti-Furga G, Sattler M.

J Biomol NMR. 2005 Aug;32(4):335. No abstract available.

PMID:
16211486
36.

Structural basis for the cytoskeletal association of Bcr-Abl/c-Abl.

Hantschel O, Wiesner S, Güttler T, Mackereth CD, Rix LL, Mikes Z, Dehne J, Görlich D, Sattler M, Superti-Furga G.

Mol Cell. 2005 Aug 19;19(4):461-73.

37.

Extending the size of protein-RNA complexes studied by nuclear magnetic resonance spectroscopy.

Mackereth CD, Simon B, Sattler M.

Chembiochem. 2005 Sep;6(9):1578-84. Review. No abstract available.

PMID:
16075426
38.

Structural and dynamic independence of isopeptide-linked RanGAP1 and SUMO-1.

Macauley MS, Errington WJ, Okon M, Schärpf M, Mackereth CD, Schulman BA, McIntosh LP.

J Biol Chem. 2004 Nov 19;279(47):49131-7. Epub 2004 Sep 7.

39.

Diversity in structure and function of the Ets family PNT domains.

Mackereth CD, Schärpf M, Gentile LN, MacIntosh SE, Slupsky CM, McIntosh LP.

J Mol Biol. 2004 Sep 24;342(4):1249-64.

PMID:
15351649
40.

Mutations in the SAM domain of the ETV6-NTRK3 chimeric tyrosine kinase block polymerization and transformation activity.

Tognon CE, Mackereth CD, Somasiri AM, McIntosh LP, Sorensen PH.

Mol Cell Biol. 2004 Jun;24(11):4636-50.

41.

Chemical shift and secondary structure conservation of the PNT/SAM domains from the ets family of transcription factors.

Mackereth CD, Schärpf M, Gentile LN, McIntosh LP.

J Biomol NMR. 2002 Sep;24(1):71-2. No abstract available.

PMID:
12449421
42.

Oligomerization-dependent association of the SAM domains from Schizosaccharomyces pombe Byr2 and Ste4.

Ramachander R, Kim CA, Phillips ML, Mackereth CD, Thanos CD, McIntosh LP, Bowie JU.

J Biol Chem. 2002 Oct 18;277(42):39585-93. Epub 2002 Aug 8.

43.

Structural proteomics of an archaeon.

Christendat D, Yee A, Dharamsi A, Kluger Y, Savchenko A, Cort JR, Booth V, Mackereth CD, Saridakis V, Ekiel I, Kozlov G, Maxwell KL, Wu N, McIntosh LP, Gehring K, Kennedy MA, Davidson AR, Pai EF, Gerstein M, Edwards AM, Arrowsmith CH.

Nat Struct Biol. 2000 Oct;7(10):903-9.

PMID:
11017201
44.

Zinc-bundle structure of the essential RNA polymerase subunit RPB10 from Methanobacterium thermoautotrophicum.

Mackereth CD, Arrowsmith CH, Edwards AM, McIntosh LP.

Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6316-21.

45.

Structure of the Ets-1 pointed domain and mitogen-activated protein kinase phosphorylation site.

Slupsky CM, Gentile LN, Donaldson LW, Mackereth CD, Seidel JJ, Graves BJ, McIntosh LP.

Proc Natl Acad Sci U S A. 1998 Oct 13;95(21):12129-34.

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