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Items: 50

1.

Correction: Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1.

Mackelprang RD, Bamshad MJ, Chong JX, Hou X, Buckingham KJ, Shively K, deBruyn G, Mugo NR, Mullins JI, McElrath MJ, Baeten JM, Celum C, Emond MJ, Lingappa JR; Partners in Prevention HSV/HIV Transmission Study and the Partners PrEP Study Teams.

PLoS Pathog. 2019 Feb 11;15(2):e1007588. doi: 10.1371/journal.ppat.1007588. eCollection 2019 Feb.

2.

Changes in the Active, Dead, and Dormant Microbial Community Structure across a Pleistocene Permafrost Chronosequence.

Burkert A, Douglas TA, Waldrop MP, Mackelprang R.

Appl Environ Microbiol. 2019 Mar 22;85(7). pii: e02646-18. doi: 10.1128/AEM.02646-18. Print 2019 Apr 1.

3.

EPHA2 sequence variants are associated with susceptibility to Kaposi's sarcoma-associated herpesvirus infection and Kaposi's sarcoma prevalence in HIV-infected patients.

Blumenthal MJ, Schutz C, Meintjes G, Mohamed Z, Mendelson M, Ambler JM, Whitby D, Mackelprang RD, Carse S, Katz AA, Schäfer G.

Cancer Epidemiol. 2018 Oct;56:133-139. doi: 10.1016/j.canep.2018.08.005. Epub 2018 Aug 31.

4.

Microbial Community Structure and Functional Potential in Cultivated and Native Tallgrass Prairie Soils of the Midwestern United States.

Mackelprang R, Grube AM, Lamendella R, Jesus EDC, Copeland A, Liang C, Jackson RD, Rice CW, Kapucija S, Parsa B, Tringe SG, Tiedje JM, Jansson JK.

Front Microbiol. 2018 Aug 15;9:1775. doi: 10.3389/fmicb.2018.01775. eCollection 2018.

5.

Bacterial Community Dynamics in Dichloromethane-Contaminated Groundwater Undergoing Natural Attenuation.

Wright J, Kirchner V, Bernard W, Ulrich N, McLimans C, Campa MF, Hazen T, Macbeth T, Marabello D, McDermott J, Mackelprang R, Roth K, Lamendella R.

Front Microbiol. 2017 Nov 22;8:2300. doi: 10.3389/fmicb.2017.02300. eCollection 2017.

6.

Toll-like receptor 9 polymorphism is associated with increased Epstein-Barr virus and Cytomegalovirus acquisition in HIV-exposed infants.

Beima-Sofie K, Wamalwa D, Maleche-Obimbo E, Lingappa JR, Mackelprang R, Gantt S, John-Stewart G, Casper C, Slyker JA.

AIDS. 2018 Jan 14;32(2):267-270. doi: 10.1097/QAD.0000000000001680.

7.

Whole genome sequencing of extreme phenotypes identifies variants in CD101 and UBE2V1 associated with increased risk of sexually acquired HIV-1.

Mackelprang RD, Bamshad MJ, Chong JX, Hou X, Buckingham KJ, Shively K, deBruyn G, Mugo NR, Mullins JI, McElrath MJ, Baeten JM, Celum C, Emond MJ, Lingappa JR; Partners in Prevention HSV/HIV Transmission Study and the Partners PrEP Study Teams.

PLoS Pathog. 2017 Nov 6;13(11):e1006703. doi: 10.1371/journal.ppat.1006703. eCollection 2017 Nov. Erratum in: PLoS Pathog. 2019 Feb 11;15(2):e1007588.

8.

Preference of Arabidopsis thaliana GH3.5 acyl amido synthetase for growth versus defense hormone acyl substrates is dictated by concentration of amino acid substrate aspartate.

Mackelprang R, Okrent RA, Wildermuth MC.

Phytochemistry. 2017 Nov;143:19-28. doi: 10.1016/j.phytochem.2017.07.001. Epub 2017 Jul 23.

PMID:
28743075
9.

Microbial survival strategies in ancient permafrost: insights from metagenomics.

Mackelprang R, Burkert A, Haw M, Mahendrarajah T, Conaway CH, Douglas TA, Waldrop MP.

ISME J. 2017 Oct;11(10):2305-2318. doi: 10.1038/ismej.2017.93. Epub 2017 Jul 11.

10.

Correction for Lund et al., HIV-1-Neutralizing IgA Detected in Genital Secretions of Highly HIV-1-Exposed Seronegative Women on Oral Preexposure Prophylaxis.

Lund JM, Broliden K, Pyra MN, Thomas KK, Donnell D, Irungu E, Muwonge TR, Mugo N, Manohar M, Jansson M, Mackelprang R, Marzinke MA, Baeten JM, Lingappa JR.

J Virol. 2017 Jan 18;91(3). pii: e02074-16. doi: 10.1128/JVI.02074-16. Print 2017 Feb 1. No abstract available.

11.

Microbiome Composition and Function Drives Wound-Healing Impairment in the Female Genital Tract.

Zevin AS, Xie IY, Birse K, Arnold K, Romas L, Westmacott G, Novak RM, McCorrister S, McKinnon LR, Cohen CR, Mackelprang R, Lingappa J, Lauffenburger DA, Klatt NR, Burgener AD.

PLoS Pathog. 2016 Sep 22;12(9):e1005889. doi: 10.1371/journal.ppat.1005889. eCollection 2016 Sep.

12.

Marine microbiology: Community clean up.

Mackelprang R, Mason OU.

Nat Microbiol. 2016 Jun 24;1(7):16102. doi: 10.1038/nmicrobiol.2016.102. No abstract available.

PMID:
27572981
13.

HIV-1-Neutralizing IgA Detected in Genital Secretions of Highly HIV-1-Exposed Seronegative Women on Oral Preexposure Prophylaxis.

Lund JM, Broliden K, Pyra MN, Thomas KK, Donnell D, Irungu E, Muwonge TR, Mugo N, Manohar M, Jansson M, Mackelprang R, Marzinke MA, Baeten JM, Lingappa JR.

J Virol. 2016 Oct 14;90(21):9855-9861. doi: 10.1128/JVI.01482-16. Print 2016 Nov 1. Erratum in: J Virol. 2017 Jan 18;91(3):.

14.

Dual contraceptive method use in HIV-serodiscordant Kenyan couples.

Roxby AC, Ben-Youssef L, Marx G, Kinoti F, Bosire R, Guthrie B, Mackelprang R, Kiarie J, John-Stewart G, Farquhar C.

J Fam Plann Reprod Health Care. 2016 Oct;42(4):264-270. doi: 10.1136/jfprhc-2015-101233. Epub 2016 Feb 10.

15.

Toll-like receptor gene variants and bacterial vaginosis among HIV-1 infected and uninfected African women.

Mackelprang RD, Scoville CW, Cohen CR, Ondondo RO, Bigham AW, Celum C, Campbell MS, Essex M, Wald A, Kiarie J, Ronald A, Gray G, Lingappa JR; Partners in Prevention HSV/HIV Transmission Study Team.

Genes Immun. 2015 Jul-Aug;16(5):362-365. doi: 10.1038/gene.2015.13. Epub 2015 Apr 30.

16.

Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes.

Hultman J, Waldrop MP, Mackelprang R, David MM, McFarland J, Blazewicz SJ, Harden J, Turetsky MR, McGuire AD, Shah MB, VerBerkmoes NC, Lee LH, Mavrommatis K, Jansson JK.

Nature. 2015 May 14;521(7551):208-12. doi: 10.1038/nature14238. Epub 2015 Mar 4.

PMID:
25739499
17.

Host genetic and viral determinants of HIV-1 RNA set point among HIV-1 seroconverters from sub-saharan Africa.

Mackelprang RD, Carrington M, Thomas KK, Hughes JP, Baeten JM, Wald A, Farquhar C, Fife K, Campbell MS, Kapiga S, Gao X, Mullins JI, Lingappa JR.

J Virol. 2015 Feb;89(4):2104-11. doi: 10.1128/JVI.01573-14. Epub 2014 Dec 3.

18.

FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus.

Prestat E, David MM, Hultman J, Taş N, Lamendella R, Dvornik J, Mackelprang R, Myrold DD, Jumpponen A, Tringe SG, Holman E, Mavromatis K, Jansson JK.

Nucleic Acids Res. 2014 Oct 29;42(19):e145. doi: 10.1093/nar/gku702. Epub 2014 Sep 26.

19.

Variants in host viral replication cycle genes are associated with heterosexual HIV-1 acquisition in Africans.

Bigham AW, Mackelprang RD, Celum C, De Bruyn G, Beima-Sofie K, John-Stewart G, Ronald A, Mugo NR, Buckingham K, Bamshad MJ, Mullins JI, McElrath MJ, Lingappa JR.

J Acquir Immune Defic Syndr. 2014 Jun 1;66(2):127-34. doi: 10.1097/QAI.0000000000000113.

20.

Toll-like receptor polymorphism associations with HIV-1 outcomes among sub-Saharan Africans.

Mackelprang RD, Bigham AW, Celum C, de Bruyn G, Beima-Sofie K, John-Stewart G, Ronald A, Mugo NR, Buckingham KJ, Bamshad MJ, Mullins JI, McElrath MJ, Lingappa JR.

J Infect Dis. 2014 May 15;209(10):1623-7. doi: 10.1093/infdis/jit807. Epub 2013 Dec 10.

21.

Toll-like receptor variants are associated with infant HIV-1 acquisition and peak plasma HIV-1 RNA level.

Beima-Sofie KM, Bigham AW, Lingappa JR, Wamalwa D, Mackelprang RD, Bamshad MJ, Maleche-Obimbo E, Richardson BA, John-Stewart GC.

AIDS. 2013 Sep 24;27(15):2431-9. doi: 10.1097/QAD.0b013e3283629117.

22.

Incident HSV-2 infections are common among HIV-1-discordant couples.

Muiru AN, Guthrie BL, Bosire R, Merkel M, Liu AY, Choi RY, Lohman-Payne B, Gatuguta A, Mackelprang RD, Kiarie JN, Farquhar C.

J Infect Dis. 2013 Oct 1;208(7):1093-101. doi: 10.1093/infdis/jit303. Epub 2013 Jul 9.

23.

Ventilation patterns of the songbird lung/air sac system during different behaviors.

Mackelprang R, Goller F.

J Exp Biol. 2013 Oct 1;216(Pt 19):3611-9. doi: 10.1242/jeb.087197. Epub 2013 Jun 20.

24.

High rates of relationship dissolution among heterosexual HIV-serodiscordant couples in Kenya.

Mackelprang RD, Bosire R, Guthrie BL, Choi RY, Liu A, Gatuguta A, Rositch AF, Kiarie JN, Farquhar C.

AIDS Behav. 2014 Jan;18(1):189-93. doi: 10.1007/s10461-013-0529-6.

25.

Characterization of the trunk neural crest in the bamboo shark, Chiloscyllium punctatum.

Juarez M, Reyes M, Coleman T, Rotenstein L, Sao S, Martinez D, Jones M, Mackelprang R, De Bellard ME.

J Comp Neurol. 2013 Oct 1;521(14):3303-20. doi: 10.1002/cne.23351.

26.

HIV-1-specific enzyme-linked immunosorbent spot assay responses in HIV-1-exposed uninfected partners in discordant relationships compared to those in low-risk controls.

Guthrie BL, Lohman-Payne B, Liu AY, Bosire R, Nuvor SV, Choi RY, Mackelprang RD, Kiarie JN, De Rosa SC, Richardson BA, John-Stewart GC, Farquhar C.

Clin Vaccine Immunol. 2012 Nov;19(11):1798-805. doi: 10.1128/CVI.00179-12. Epub 2012 Sep 12.

27.

Distance from home to study clinic and risk of follow-up interruption in a cohort of HIV-1-discordant couples in Nairobi, Kenya.

Conley NJ, Pavlinac PB, Guthrie BL, Mackelprang RD, Muiru AN, Choi RY, Bosire R, Gatuguta A, Farquhar C.

PLoS One. 2012;7(8):e43138. doi: 10.1371/journal.pone.0043138. Epub 2012 Aug 21.

28.

Quantifying ongoing HIV-1 exposure in HIV-1-serodiscordant couples to identify individuals with potential host resistance to HIV-1.

Mackelprang RD, Baeten JM, Donnell D, Celum C, Farquhar C, de Bruyn G, Essex M, McElrath MJ, Nakku-Joloba E, Lingappa JR; Partners in Prevention HSV/HIV Transmission Study Team.

J Infect Dis. 2012 Oct;206(8):1299-308. Epub 2012 Aug 27.

29.

Knowledge and acceptability of pap smears, self-sampling and HPV vaccination among adult women in Kenya.

Rositch AF, Gatuguta A, Choi RY, Guthrie BL, Mackelprang RD, Bosire R, Manyara L, Kiarie JN, Smith JS, Farquhar C.

PLoS One. 2012;7(7):e40766. doi: 10.1371/journal.pone.0040766. Epub 2012 Jul 10.

30.

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill.

Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom LM, Tringe SG, Woyke T, Zhou J, Rubin EM, Jansson JK.

ISME J. 2012 Sep;6(9):1715-27. doi: 10.1038/ismej.2012.59. Epub 2012 Jun 21.

31.

Microbes in thawing permafrost: the unknown variable in the climate change equation.

Graham DE, Wallenstein MD, Vishnivetskaya TA, Waldrop MP, Phelps TJ, Pfiffner SM, Onstott TC, Whyte LG, Rivkina EM, Gilichinsky DA, Elias DA, Mackelprang R, VerBerkmoes NC, Hettich RL, Wagner D, Wullschleger SD, Jansson JK.

ISME J. 2012 Apr;6(4):709-12. doi: 10.1038/ismej.2011.163. Epub 2011 Nov 17. No abstract available.

32.

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw.

Mackelprang R, Waldrop MP, DeAngelis KM, David MM, Chavarria KL, Blazewicz SJ, Rubin EM, Jansson JK.

Nature. 2011 Nov 6;480(7377):368-71. doi: 10.1038/nature10576.

PMID:
22056985
33.

Barriers to antiretroviral initiation in HIV-1-discordant couples.

Guthrie BL, Choi RY, Liu AY, Mackelprang RD, Rositch AF, Bosire R, Manyara L, Gatuguta A, Kiarie JN, Farquhar C.

J Acquir Immune Defic Syndr. 2011 Nov 1;58(3):e87-93. doi: 10.1097/QAI.0b013e31822f064e.

34.

Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project.

Gilbert JA, Meyer F, Antonopoulos D, Balaji P, Brown CT, Brown CT, Desai N, Eisen JA, Evers D, Field D, Feng W, Huson D, Jansson J, Knight R, Knight J, Kolker E, Konstantindis K, Kostka J, Kyrpides N, Mackelprang R, McHardy A, Quince C, Raes J, Sczyrba A, Shade A, Stevens R.

Stand Genomic Sci. 2010 Dec 25;3(3):243-8. doi: 10.4056/sigs.1433550.

35.

Maternal human leukocyte antigen A*2301 is associated with increased mother-to-child HIV-1 transmission.

Mackelprang RD, Carrington M, John-Stewart G, Lohman-Payne B, Richardson BA, Wamalwa D, Gao X, Majiwa M, Mbori-Ngacha D, Farquhar C.

J Infect Dis. 2010 Oct 15;202(8):1273-7. doi: 10.1086/656318.

36.

Disability controversies: past, present, and future.

Mackelprang RW.

J Soc Work Disabil Rehabil. 2010;9(2):87-98. doi: 10.1080/1536710X.2010.493475.

PMID:
20730669
37.

Predicting pregnancy in HIV-1-discordant couples.

Guthrie BL, Choi RY, Bosire R, Kiarie JN, Mackelprang RD, Gatuguta A, John-Stewart GC, Farquhar C.

AIDS Behav. 2010 Oct;14(5):1066-71. doi: 10.1007/s10461-010-9716-x.

38.

Access for all: universal design and the employment of people with disabilities.

Mackelprang RW, Clute MA.

J Soc Work Disabil Rehabil. 2009;8(3-4):205-21. doi: 10.1080/15367100903202771.

PMID:
20183632
39.

CCR2-64I polymorphism is associated with lower maternal HIV-1 viral load and reduced vertical HIV-1 transmission.

Mabuka JM, Mackelprang RD, Lohman-Payne B, Majiwa M, Bosire R, John-Stewart G, Rowland-Jones S, Overbaugh J, Farquhar C.

J Acquir Immune Defic Syndr. 2009 Jun 1;51(2):235-7. doi: 10.1097/QAI.0b013e31819c155b. No abstract available.

40.

Youth with disabilities: a standardized self-portrait of how they are faring.

Altshuler SJ, Mackelprang RW, Baker RL.

J Soc Work Disabil Rehabil. 2008;7(1):1-18. doi: 10.1080/15367100802009657.

PMID:
19042299
41.

Paleontology. New tricks with old bones.

Mackelprang R, Rubin EM.

Science. 2008 Jul 11;321(5886):211-2. doi: 10.1126/science.1161890. No abstract available.

PMID:
18621660
42.

Maternal HLA homozygosity and mother-child HLA concordance increase the risk of vertical transmission of HIV-1.

Mackelprang RD, John-Stewart G, Carrington M, Richardson B, Rowland-Jones S, Gao X, Mbori-Ngacha D, Mabuka J, Lohman-Payne B, Farquhar C.

J Infect Dis. 2008 Apr 15;197(8):1156-61. doi: 10.1086/529528.

43.

Historical and contemporary issues in end-of-life decisions: implications for social work.

Mackelprang RW, Mackelprang RD.

Soc Work. 2005 Oct;50(4):315-24.

PMID:
17892241
44.

Sequence diversity, natural selection and linkage disequilibrium in the human T cell receptor alpha/delta locus.

Mackelprang R, Livingston RJ, Eberle MA, Carlson CS, Yi Q, Akey JM, Nickerson DA.

Hum Genet. 2006 Apr;119(3):255-66. Epub 2006 Jan 20.

PMID:
16425038
45.

Bioterrorism and smallpox: policies, practices, and implications for social work.

Mackelprang RW, Mackelprang RD, Thirkill AD.

Soc Work. 2005 Apr;50(2):119-27.

PMID:
15853189
46.

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors.

Yvert G, Brem RB, Whittle J, Akey JM, Foss E, Smith EN, Mackelprang R, Kruglyak L.

Nat Genet. 2003 Sep;35(1):57-64. Epub 2003 Aug 3.

PMID:
12897782
47.

Sequence variation in the human T-cell receptor loci.

Mackelprang R, Carlson CS, Subrahmanyan L, Livingston RJ, Eberle MA, Nickerson DA.

Immunol Rev. 2002 Dec;190:26-39. Review.

PMID:
12493004
48.

High prevalence of Sin Nombre virus in rodent populations, central Utah: a consequence of human disturbance?

Mackelprang R, Dearing MD, St Jeor S.

Emerg Infect Dis. 2001 May-Jun;7(3):480-2. No abstract available.

49.

People with disabilities and social work: historical and contemporary issues.

Mackelprang RW, Salsgiver RO.

Soc Work. 1996 Jan;41(1):7-14.

PMID:
8560321
50.

Ecological factors in rehabilitation of patients with severe spinal cord injuries.

Mackelprang RW, Hepworth DH.

Soc Work Health Care. 1987 Fall;13(1):23-38.

PMID:
3448789

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