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Items: 1 to 50 of 781

1.

Characterization of myofiber type-specific molecules using mass spectrometry imaging.

Goto-Inoue N, Morisasa M, Machida K, Furuichi Y, Fujii NL, Miura S, Mori T.

Rapid Commun Mass Spectrom. 2018 Oct 26. doi: 10.1002/rcm.8319. [Epub ahead of print]

PMID:
30367536
2.

NANOG-Dependent Metabolic Reprogramming and Symmetric Division in Tumor-Initiating Stem-like Cells.

Machida K.

Adv Exp Med Biol. 2018;1032:105-113. doi: 10.1007/978-3-319-98788-0_8.

PMID:
30362094
3.

Noonan Syndrome-Associated SHP2 Dephosphorylates GluN2B to Regulate NMDA Receptor Function.

Levy AD, Xiao X, Shaw JE, Sudarsana Devi SP, Katrancha SM, Bennett AM, Greer CA, Howe JR, Machida K, Koleske AJ.

Cell Rep. 2018 Aug 7;24(6):1523-1535. doi: 10.1016/j.celrep.2018.07.006.

4.

Impact of the favorable prognosis of patients with lung cancer adjoining bullae.

Shinohara S, Sugaya M, Onitsuka T, Machida K, Matsuo M, Kato K, Tanaka F.

J Thorac Dis. 2018 Jun;10(6):3289-3297. doi: 10.21037/jtd.2018.05.125.

5.

Sameuramide A, a new cyclic depsipeptide isolated from an ascidian of the family Didemnidae.

Machida K, Arai D, Katsumata R, Otsuka S, Yamashita JK, Ye T, Tang S, Fusetani N, Nakao Y.

Bioorg Med Chem. 2018 Jul 30;26(13):3852-3857. doi: 10.1016/j.bmc.2018.06.042. Epub 2018 Jun 30.

PMID:
29983284
6.

Adherence barriers to inhaled medicines in Japanese older patients with asthma evaluated using the "Adherence Starts with Knowledge 20" (ASK-20) questionnaire.

Sasaki J, Kawayama T, Yoshida M, Takahashi K, Fujii K, Machida K, Kinoshita T, Hoshino T; and the Kyushu Asthma Seminar Investigators.

J Asthma. 2018 Sep 19:1-10. doi: 10.1080/02770903.2018.1484132. [Epub ahead of print]

PMID:
29969920
7.

Impact of Postoperative Pneumonia Developing After Discharge on Long-Term Follow-up for Resected Lung Cancer.

Shinohara S, Sugaya M, Onitsuka T, Machida K, Matsuo M, Tanaka F.

World J Surg. 2018 Dec;42(12):3979-3987. doi: 10.1007/s00268-018-4727-2.

PMID:
29946786
8.

Multifaceted properties of Andreev bound states: interplay of symmetry and topology.

Mizushima T, Machida K.

Philos Trans A Math Phys Eng Sci. 2018 Aug 6;376(2125). pii: 20150355. doi: 10.1098/rsta.2015.0355.

PMID:
29941630
9.

Prognostic Impact of Postoperative C-reactive Protein for Non-small Cell Lung Cancer Following Lobectomy.

Shinohara S, Sugaya M, Onitsuka T, Machida K, Matsuo M, Tanaka F.

Anticancer Res. 2018 May;38(5):3193-3198.

PMID:
29715162
10.

Correction: Optogenetic activation of EphB2 receptor in dendrites induced actin polymerization by activating Arg kinase.

Locke C, Machida K, Tucker CL, Wu Y, Yu J.

Biol Open. 2018 Apr 23;7(4). pii: bio034694. doi: 10.1242/bio.034694. No abstract available.

11.

Bilateral Hydronephrotic Bladder Metastasis from Lung Cancer.

Kuga T, Machida K, Ito H, Matsuo M.

Intern Med. 2018 Jun 15;57(12):1801. doi: 10.2169/internalmedicine.9535-17. Epub 2018 Feb 9. No abstract available.

12.

Large-scale aggregation analysis of eukaryotic proteins reveals an involvement of intrinsically disordered regions in protein folding.

Uemura E, Niwa T, Minami S, Takemoto K, Fukuchi S, Machida K, Imataka H, Ueda T, Ota M, Taguchi H.

Sci Rep. 2018 Jan 12;8(1):678. doi: 10.1038/s41598-017-18977-5.

13.

Pluripotency transcription factors and Metabolic reprogramming of mitochondria in tumor-initiating stem-like cells.

Machida K.

Antioxid Redox Signal. 2017 Dec 19. doi: 10.1089/ars.2017.7241. [Epub ahead of print]

PMID:
29256636
14.

Huntingtin Polyglutamine-Dependent Protein Aggregation in Reconstituted Cells.

Machida K, Kanzawa K, Shigeta T, Yamamoto Y, Tsumoto K, Imataka H.

ACS Synth Biol. 2018 Feb 16;7(2):377-383. doi: 10.1021/acssynbio.7b00372. Epub 2017 Dec 14.

PMID:
29232946
15.

Optogenetic activation of EphB2 receptor in dendrites induced actin polymerization by activating Arg kinase.

Locke C, Machida K, Wu Y, Yu J.

Biol Open. 2017 Dec 15;6(12):1820-1830. doi: 10.1242/bio.029900. Erratum in: Biol Open. 2018 Apr 23;7(4):.

16.

Photo-triggered recognition between host and guest compounds in a giant vesicle encapsulating photo-pierceable vesicles.

Suzuki K, Machida K, Yamaguchi K, Sugawara T.

Chem Phys Lipids. 2018 Jan;210:70-75. doi: 10.1016/j.chemphyslip.2017.11.008. Epub 2017 Nov 9.

PMID:
29129571
17.

Mitophagy Controls the Activities of Tumor Suppressor p53 to Regulate Hepatic Cancer Stem Cells.

Liu K, Lee J, Kim JY, Wang L, Tian Y, Chan ST, Cho C, Machida K, Chen D, Ou JJ.

Mol Cell. 2017 Oct 19;68(2):281-292.e5. doi: 10.1016/j.molcel.2017.09.022. Epub 2017 Oct 12.

18.

Crk Tyrosine Phosphorylation Regulates PDGF-BB-inducible Src Activation and Breast Tumorigenicity and Metastasis.

Kumar S, Lu B, Davra V, Hornbeck P, Machida K, Birge RB.

Mol Cancer Res. 2018 Jan;16(1):173-183. doi: 10.1158/1541-7786.MCR-17-0242. Epub 2017 Oct 3.

PMID:
28974561
19.

The 2-oxoglutarate carrier promotes liver cancer by sustaining mitochondrial GSH despite cholesterol loading.

Baulies A, Montero J, Matías N, Insausti N, Terrones O, Basañez G, Vallejo C, Conde de La Rosa L, Martinez L, Robles D, Morales A, Abian J, Carrascal M, Machida K, Kumar DBU, Tsukamoto H, Kaplowitz N, Garcia-Ruiz C, Fernández-Checa JC.

Redox Biol. 2018 Apr;14:164-177. doi: 10.1016/j.redox.2017.08.022. Epub 2017 Sep 14.

20.

Role of macrophages in depot-dependent browning of white adipose tissue.

Machida K, Okamatsu-Ogura Y, Shin W, Matsuoka S, Tsubota A, Kimura K.

J Physiol Sci. 2018 Sep;68(5):601-608. doi: 10.1007/s12576-017-0567-3. Epub 2017 Sep 6.

PMID:
28879502
21.

Simultaneous assessment of blood coagulation and hematocrit levels in dielectric blood coagulometry.

Hayashi Y, Brun MA, Machida K, Lee S, Murata A, Omori S, Uchiyama H, Inoue Y, Kudo T, Toyofuku T, Nagasawa M, Uchimura I, Nakamura T, Muneta T.

Biorheology. 2017;54(1):25-35. doi: 10.3233/BIR-16118.

22.

Wnt/β-catenin activation and macrophage induction during liver cancer development following steatosis.

Debebe A, Medina V, Chen CY, Mahajan IM, Jia C, Fu D, He L, Zeng N, Stiles BW, Chen CL, Wang M, Aggarwal KR, Peng Z, Huang J, Chen J, Li M, Dong T, Atkins S, Borok Z, Yuan W, Machida K, Ju C, Kahn M, Johnson D, Stiles BL.

Oncogene. 2017 Oct 26;36(43):6020-6029. doi: 10.1038/onc.2017.207. Epub 2017 Jul 3.

23.

Characteristics and components of poly-aluminum chloride coagulants that enhance arsenate removal by coagulation: Detailed analysis of aluminum species.

Matsui Y, Shirasaki N, Yamaguchi T, Kondo K, Machida K, Fukuura T, Matsushita T.

Water Res. 2017 Jul 1;118:177-186. doi: 10.1016/j.watres.2017.04.037. Epub 2017 Apr 15.

PMID:
28431350
24.

Brain Region and Isoform-Specific Phosphorylation Alters Kalirin SH2 Domain Interaction Sites and Calpain Sensitivity.

Miller MB, Yan Y, Machida K, Kiraly DD, Levy AD, Wu YI, Lam TT, Abbott T, Koleske AJ, Eipper BA, Mains RE.

ACS Chem Neurosci. 2017 Jul 19;8(7):1554-1569. doi: 10.1021/acschemneuro.7b00076. Epub 2017 Apr 25.

25.

Phosphorylated cortactin recruits Vav2 guanine nucleotide exchange factor to activate Rac3 and promote invadopodial function in invasive breast cancer cells.

Rosenberg BJ, Gil-Henn H, Mader CC, Halo T, Yin T, Condeelis J, Machida K, Wu YI, Koleske AJ.

Mol Biol Cell. 2017 May 15;28(10):1347-1360. doi: 10.1091/mbc.E16-12-0885. Epub 2017 Mar 29.

26.

Near-Infrared Photoluminescent Carbon Nanotubes for Imaging of Brown Fat.

Yudasaka M, Yomogida Y, Zhang M, Tanaka T, Nakahara M, Kobayashi N, Okamatsu-Ogura Y, Machida K, Ishihara K, Saeki K, Kataura H.

Sci Rep. 2017 Mar 20;7:44760. doi: 10.1038/srep44760.

27.

Loss of the transforming growth factor-β effector β2-Spectrin promotes genomic instability.

Chen J, Shukla V, Farci P, Andricovich J, Jogunoori W, Kwong LN, Katz LH, Shetty K, Rashid A, Su X, White J, Li L, Wang AY, Blechacz B, Raju GS, Davila M, Nguyen BN, Stroehlein JR, Chen J, Kim SS, Levin H, Machida K, Tsukamoto H, Michaely P, Tzatsos A, Mishra B, Amdur R, Mishra L.

Hepatology. 2017 Feb;65(2):678-693. doi: 10.1002/hep.28927. Epub 2016 Dec 24.

28.

Rosette Assay: Highly Customizable Dot-Blot for SH2 Domain Screening.

Ng KY, Machida K.

Methods Mol Biol. 2017;1555:437-451. doi: 10.1007/978-1-4939-6762-9_26.

PMID:
28092049
29.

In-Solution SH2 Domain Binding Assay Based on Proximity Ligation.

Machida K.

Methods Mol Biol. 2017;1555:331-347. doi: 10.1007/978-1-4939-6762-9_18.

PMID:
28092041
30.

Binding Assays Using Recombinant SH2 Domains: Far-Western, Pull-Down, and Fluorescence Polarization.

Machida K, Liu B.

Methods Mol Biol. 2017;1555:307-330. doi: 10.1007/978-1-4939-6762-9_17.

PMID:
28092040
31.

Functionally Altered SH2 Domains for Biochemical Studies: Loss-of-Function Mutant and Domain Concatenation.

Ogiue-Ikeda M, Machida K.

Methods Mol Biol. 2017;1555:199-223. doi: 10.1007/978-1-4939-6762-9_12.

PMID:
28092035
32.

Expression and Purification of SH2 Domains Using Baculovirus Expression System.

Ogiue-Ikeda M, Machida K.

Methods Mol Biol. 2017;1555:183-198. doi: 10.1007/978-1-4939-6762-9_11.

PMID:
28092034
33.

Expression and Production of SH2 Domain Proteins.

Liu BA, Ogiue-Ikeda M, Machida K.

Methods Mol Biol. 2017;1555:117-162. doi: 10.1007/978-1-4939-6762-9_8.

PMID:
28092031
34.

Introduction: History of SH2 Domains and Their Applications.

Liu BA, Machida K.

Methods Mol Biol. 2017;1555:3-35. doi: 10.1007/978-1-4939-6762-9_1.

PMID:
28092024
35.

Hepatitis C virus has a genetically determined lymphotropism through co-receptor B7.2.

Chen CL, Huang JY, Wang CH, Tahara SM, Zhou L, Kondo Y, Schechter J, Su L, Lai MM, Wakita T, Cosset FL, Jung JU, Machida K.

Nat Commun. 2017 Jan 9;8:13882. doi: 10.1038/ncomms13882.

36.

Impaired adrenergic agonist-dependent beige adipocyte induction in aged mice.

Shin W, Okamatsu-Ogura Y, Machida K, Tsubota A, Nio-Kobayashi J, Kimura K.

Obesity (Silver Spring). 2017 Feb;25(2):417-423. doi: 10.1002/oby.21727. Epub 2016 Dec 27.

37.

Existence of cancer stem cells in hepatocellular carcinoma: myth or reality?

Machida K.

Hepatol Int. 2017 Mar;11(2):143-147. doi: 10.1007/s12072-016-9777-7. Epub 2016 Dec 18.

38.

Synthesis and Stereochemical Analysis of Planar-Chiral (E)-4-[7]Orthocyclophene.

Igawa K, Machida K, Noguchi K, Uehara K, Tomooka K.

J Org Chem. 2016 Dec 2;81(23):11587-11593. Epub 2016 Nov 16.

PMID:
27934449
39.

Cell-free analysis of polyQ-dependent protein aggregation and its inhibition by chaperone proteins.

Machida K, Shigeta T, Kobayashi A, Masumoto A, Hidaka Y, Imataka H.

J Biotechnol. 2016 Dec 10;239:1-8. doi: 10.1016/j.jbiotec.2016.09.031. Epub 2016 Oct 1.

PMID:
27702574
40.

Erratum to: Serum B cell-activating factor (BAFF) level in connective tissue disease associated interstitial lung disease.

Hamada T, Samukawa T, Kumamoto T, Hatanaka K, Tsukuya G, Yamamoto M, Machida K, Watanabe M, Mizuno K, Higashimoto I, Inoue Y, Inoue H.

BMC Pulm Med. 2016 Aug 8;16(1):117. No abstract available.

41.

Angle-resolved heat capacity of heavy fermion superconductors.

Sakakibara T, Kittaka S, Machida K.

Rep Prog Phys. 2016 Sep;79(9):094002. doi: 10.1088/0034-4885/79/9/094002. Epub 2016 Aug 2.

PMID:
27482621
42.

Omnidirectional Measurements of Angle-Resolved Heat Capacity for Complete Detection of Superconducting Gap Structure in the Heavy-Fermion Antiferromagnet UPd_{2}Al_{3}.

Shimizu Y, Kittaka S, Sakakibara T, Tsutsumi Y, Nomoto T, Ikeda H, Machida K, Homma Y, Aoki D.

Phys Rev Lett. 2016 Jul 15;117(3):037001. doi: 10.1103/PhysRevLett.117.037001. Epub 2016 Jul 12.

PMID:
27472129
43.

Time-resolved multimodal analysis of Src Homology 2 (SH2) domain binding in signaling by receptor tyrosine kinases.

Jadwin JA, Oh D, Curran TG, Ogiue-Ikeda M, Jia L, White FM, Machida K, Yu J, Mayer BJ.

Elife. 2016 Apr 12;5:e11835. doi: 10.7554/eLife.11835.

44.

Factors associated with mothers not vaccinating their children against mumps in Japan.

Tsuchiya Y, Shida N, Izumi S, Ogasawara M, Kakinuma W, Tsujiuchi T, Machida K.

Public Health. 2016 Aug;137:95-105. doi: 10.1016/j.puhe.2016.03.002. Epub 2016 Apr 6.

PMID:
27062068
46.

TGF-β/β2-spectrin/CTCF-regulated tumor suppression in human stem cell disorder Beckwith-Wiedemann syndrome.

Chen J, Yao ZX, Chen JS, Gi YJ, Muñoz NM, Kundra S, Herlong HF, Jeong YS, Goltsov A, Ohshiro K, Mistry NA, Zhang J, Su X, Choufani S, Mitra A, Li S, Mishra B, White J, Rashid A, Wang AY, Javle M, Davila M, Michaely P, Weksberg R, Hofstetter WL, Finegold MJ, Shay JW, Machida K, Tsukamoto H, Mishra L.

J Clin Invest. 2016 Feb;126(2):527-42. doi: 10.1172/JCI80937. Epub 2016 Jan 19.

47.

NANOG Metabolically Reprograms Tumor-Initiating Stem-like Cells through Tumorigenic Changes in Oxidative Phosphorylation and Fatty Acid Metabolism.

Chen CL, Uthaya Kumar DB, Punj V, Xu J, Sher L, Tahara SM, Hess S, Machida K.

Cell Metab. 2016 Jan 12;23(1):206-19. doi: 10.1016/j.cmet.2015.12.004. Epub 2015 Dec 24.

48.

Optical and Magneto-Optical Properties of Gd22Fe78 Thin Films in the Photon Energy Range From 1.5 to 5.5 eV.

Jesenská E, Hashinaka T, Ishibashi T, Beran L, Dušek J, Antoš R, Kuga K, Aoshima KI, Machida K, Kinjo H, Veis M.

Materials (Basel). 2016 Jan 2;9(1). pii: E23. doi: 10.3390/ma9010023.

49.

Identification of the T-complex protein as a binding partner for newly synthesized cytoplasmic dynein intermediate chain 2.

Özdemir A, Machida K, Imataka H, Catling AD.

Biochem Biophys Res Commun. 2016 Jan 1;469(1):126-131. doi: 10.1016/j.bbrc.2015.11.082. Epub 2015 Nov 23.

PMID:
26616053
50.

TLR4 Signaling via NANOG Cooperates With STAT3 to Activate Twist1 and Promote Formation of Tumor-Initiating Stem-Like Cells in Livers of Mice.

Uthaya Kumar DB, Chen CL, Liu JC, Feldman DE, Sher LS, French S, DiNorcia J, French SW, Naini BV, Junrungsee S, Agopian VG, Zarrinpar A, Machida K.

Gastroenterology. 2016 Mar;150(3):707-19. doi: 10.1053/j.gastro.2015.11.002. Epub 2015 Nov 12.

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